LOCUS AH006960 9340 bp DNA linear HUM 10-JUN-2016
DEFINITION Homo sapiens chromosome 6 interphotoreceptor matrix (IPM150) gene,
complete cds.
ACCESSION AH006960 AF017760 AF017761 AF017762 AF017763 AF017764 AF017765
AF017766 AF017767 AF017768 AF017769 AF017770 AF017771 AF017772
AF017773 AF017774 AF017775 AF017776
VERSION AH006960.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 9340)
AUTHORS Felbor,U., Gehrig,A., Sauer,C.G., Marquardt,A., Kohler,M.,
Schmid,M. and Weber,B.H.
TITLE Genomic organization and chromosomal localization of the
interphotoreceptor matrix proteoglycan-1 (IMPG1) gene: a candidate
for 6q-linked retinopathies
JOURNAL Cytogenet. Cell Genet. 81 (1), 12-17 (1998)
PUBMED 9691169
REFERENCE 2 (bases 1 to 9340)
AUTHORS Gehrig,A., Felbor,U., Kelsell,R., Hunt,D.M., Maumenee-Hussels,I.E.
and Weber,B.H.F.
TITLE Assessment of a novel interphotoreceptor matrix gene (IPM150)
localized to 6q14.2-q15 in autosomal dominant Stargardt-like
macular dystrophy, progressive bifocal chorioretinal atrophy
(PBCRA), and North Carolina macular dystrophy (MCDR1)
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 9340)
AUTHORS Felbor,U., Kuehn,M., Hageman,G.S. and Weber,B.H.F.
TITLE Direct Submission
JOURNAL Submitted (09-AUG-1997) Humangenetik, Universitaet Wuerzburg, Am
Hubland, Wuerzburg D-97074, Germany
COMMENT On or before Jun 10, 2016 this sequence version replaced
AF017760.1, AF017761.1, AF017762.1, AF017763.1, AF017764.1,
AF017765.1, AF017766.1, AF017767.1, AF017768.1, AF017769.1,
AF017770.1, AF017771.1, AF017772.1, AF017773.1, AF017774.1,
AF017775.1, AF017776.1, AH006960.1.
FEATURES Location/Qualifiers
source 1..9340
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
/chromosome="6"
/map="6q14.2-q15"
gene <1..>8595
/gene="IPM150"
mRNA join(<1..223,507..740,1159..1325,1651..1679,2076..2140,
2512..2615,2947..3087,3357..3415,3814..3834,4147..4394,
4747..4823,5317..5395,5728..6260,6611..6830,7119..7317,
7719..7791,8518..>8595)
/gene="IPM150"
/product="interphotoreceptor matrix"
exon <1..223
/gene="IPM150"
5'UTR <1..156
/gene="IPM150"
CDS join(157..223,507..740,1159..1325,1651..1679,2076..2140,
2512..2615,2947..3087,3357..3415,3814..3834,4147..4394,
4747..4823,5317..5395,5728..6260,6611..6830,7119..7317,
7719..7791,8518..8595)
/gene="IPM150"
/codon_start=1
/product="interphotoreceptor matrix"
/protein_id="AAC68835.1"
/translation="MYLETRRAIFVFWIFLQVQGTKDISINIYHSETKDIDNPPRNET
TESTEKMYKMSTMRRIFDLAKHRTKRSAFFPTGVKVCPQESMKQILDSLQAYYRLRVC
QEAVWEAYRIFLDRIPDTGEYQDWVSICQQETFCLFDIGKNFSNSQEHLDLLQQRIKQ
RSFPDRKDEISAEKTLGEPGETIVISTDVANVSLGPFPLTPDDTLLNEILDNTLNDTK
MPTTERETEFAVLEEQRVELSVSLVNQKFKAELADSQSPYYQELAGKSQLQMQKIFKK
LPGFKKIHVLGFRPKKEKDGSSSTEMQLTAIFKRHSAEAKSPASDLLSFDSNKIESEE
VYHGTMEEDKQPEIYLTATDLKRLISKALEEEQSLDVGTIQFTDEIAGSLPAFGPDTQ
SELPTSFAVITEDATLSPELPPVEPQLETVDGAEHGLPDTSWSPPAMASTSLSEAPPF
FMASSIFSLTDQGTTDTMATDQTMLVPGLTIPTSDYSAISQLALGISHPPASSDDSRS
SAGGEDMVRHLDEMDLSDTPAPSEVPELSEYVSVPDHFLEDTTPVSALQYITTSSMTI
APKGRELVVFFSLRVANMAFSNDLFNKSSLEYRALEQQFTQLLVPYLRSNLTGFKQLE
ILNFRNGSVIVNSKMKFAKSVPYNLTKAVHGVLEDFRSAAAQQLHLEIDSYSLNIEPA
DQADPCKFLACGEFAQCVKNERTEEAECRCKPGYDSQGSLDGLEPGLCGPGTKECEVL
QGKGAPCRLPDHSENQAYKTSVKKFQNQQNNKVISKRNSELLTVEYEEFNHQDWEGN"
gap 311..410
/estimated_length=unknown
exon 507..740
/gene="IPM150"
gap 948..1047
/estimated_length=unknown
exon 1159..1325
/gene="IPM150"
gap 1470..1569
/estimated_length=unknown
exon 1651..1679
/gene="IPM150"
gap 1870..1969
/estimated_length=unknown
exon 2076..2140
/gene="IPM150"
gap 2274..2373
/estimated_length=unknown
exon 2512..2615
/gene="IPM150"
gap 2685..2784
/estimated_length=unknown
exon 2947..3087
/gene="IPM150"
gap 3162..3261
/estimated_length=unknown
exon 3357..3415
/gene="IPM150"
gap 3562..3661
/estimated_length=unknown
exon 3814..3834
/gene="IPM150"
gap 3956..4055
/estimated_length=unknown
exon 4147..4394
/gene="IPM150"
gap 4500..4599
/estimated_length=unknown
exon 4747..4823
/gene="IPM150"
gap 4947..5046
/estimated_length=unknown
exon 5317..5395
/gene="IPM150"
gap 5485..5584
/estimated_length=unknown
exon 5728..6260
/gene="IPM150"
gap 6401..6500
/estimated_length=unknown
exon 6611..6830
/gene="IPM150"
gap 6949..7048
/estimated_length=unknown
exon 7119..7317
/gene="IPM150"
gap 7526..7625
/estimated_length=unknown
exon 7719..7791
/gene="IPM150"
gap 8006..8105
/estimated_length=unknown
exon 8518..8595
/gene="IPM150"
BASE COUNT 2440 a 1522 c 1403 g 2369 t
ORIGIN
1 tacataaatt aacaccctca taaaggtaaa ccaagaaggt tatcctcaat catctggtat
61 caatatataa ttatttttca catttctgtt actttttaat gagatttgag gttgttctgt
121 gattgttatc agaattacca atgcacaaaa gccagaatgt atttggaaac tagaagagct
181 atttttgttt tttggatttt tctccaagtt caaggaacca aaggtaagtt acttaaatgt
241 ttacttttaa attgcttatc tataaaatct accgatagaa gtgaatattt agaaccaaca
301 aggctaccaa nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
361 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ttataatttt
421 cagtttattt cagtacttta tccatatatg tcacatataa cacataaatg tatatattca
481 ccaggatatc aatctttctt ttacagatat ctccattaac atataccatt ctgaaactaa
541 agacatagac aatcccccaa gaaatgaaac aactgaaagt actgaaaaaa tgtacaaaat
601 gtcaactatg agacgaatat tcgatttggc aaagcatcga acaaaaagat ccgcattttt
661 cccaacgggg gttaaagtct gtccacagga atccatgaaa cagattttag acagtcttca
721 agcttattat agattgagag gtaaggaaag agatgaaacc gtttagcctt gtgttatttc
781 catcccttcc ctttcattca tccataggtt gtctttagcc taaaacttcc agttctgtca
841 tttagccaca agaattataa aaatcaacct agtgataatc tgatagtaat gaataataaa
901 cattcaaaac tatggtagat atcagctctt atggtttaaa tatatctnnn nnnnnnnnnn
961 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1021 nnnnnnnnnn nnnnnnnnnn nnnnnnnaat tagtgtgtcg acataagcca tgaaataatt
1081 ttccatgtta ttagactttg cttgggattg ggtacgggga ccctcttagg catggccatt
1141 aatgactctg tattacagtg tgtcaggaag cagtatggga agcatatcgg atctttctgg
1201 atcgcatccc tgacacaggg gaatatcagg actgggtcag catctgccag caggagacct
1261 tctgcctctt tgacattgga aaaaacttca gcaattccca ggagcacctg gatcttctcc
1321 agcaggtgag cctaaacacc acatggttat ttggaacact gcacgaacag ttcccaggct
1381 ccagccctag gccttttgaa ttggtttcac aacgtaaggg ttaattgaag aagtgcttgg
1441 aggtatctga ttaggccaat agaaattttn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1501 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1561 nnnnnnnnna agggaatgaa aattgaactt taactcttcg gttggcatta tctcctggta
1621 aaattacatt ttatctttat ctttttgcag agaataaaac agagaagttt ccctgacagg
1681 caagtaccca aaatagagtg tgtgtgtgtg tgcttttgaa tttaaaaaga tcatataatg
1741 gagtgaaact aagctattct acctgtagga ttttatgtca gccactaaga gctgtgtaga
1801 ttattctgac agacaattcc tgcatataat gtactgaaga taaatcagta cataaaacaa
1861 aaataaatan nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1921 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnc ctataacttt
1981 tagggttact cagtataaga aatttaaatg tatgttctct actgtcatca agttctcttt
2041 caccacctct tccttctttt ctattgtact aatagaaaag atgaaatatc tgcagagaag
2101 acattgggag agcctggtga aaccattgtc atttcaacag gtaagcttag atctaatttc
2161 tttgcttctc aactttcatt caaatcatca tgatagcatg ttatttataa aacaattcct
2221 aattaaagat aatgtttata atgtactttc tcaaaactag cttatatttc taannnnnnn
2281 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2341 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnttaaaaa gatgagttca gaaggcacct
2401 aatatctgta aattccagaa tgacagaaaa agcatattga attttgacct cgttctaatt
2461 taaactcctc cattctcatt tttgtgtctt taatttttaa aattttcaca gatgttgcca
2521 acgtctcact tgggcctttc cctctcactc ctgatgacac cctcctcaat gaaattctcg
2581 ataatacact caacgacacc aagatgccta caacagtaag aagttcctag agttgatcta
2641 gctcttcatg tgcctgtttt tgttctttag caaaacagga aagannnnnn nnnnnnnnnn
2701 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2761 nnnnnnnnnn nnnnnnnnnn nnnnccagtc taggctctct ctaagtctag ttaaaggatt
2821 tgattcgaaa cgcgttaagc cttcataatc cacttcttga gacagtatca acatatatta
2881 tctaaaataa ccatttattt gtggtttagg ttaacagaag tccgtttttt ccttttttaa
2941 actcaggaaa gagaaacaga attcgctgtg ttggaggagc agagggtgga gctcagcgtc
3001 tctctggtaa accagaagtt caaggcagag ctcgctgact cccagtcccc atattaccag
3061 gagctagcag gaaagtccca acttcaggtg agtagacccg gcccatacaa ccacacctca
3121 agctgtgact gagaggtggg atgccgatag acataaaccc tnnnnnnnnn nnnnnnnnnn
3181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3241 nnnnnnnnnn nnnnnnnnnn ncccctaact catcaaaaga gttcaggttt ttcagttagg
3301 caagaactga cccagcagaa ccaaagagta ttttacaaat ttctttctct ctgcagatgc
3361 aaaagatatt taagaaactt ccaggattca aaaaaatcca tgtgttagga tttaggtaag
3421 taagagaatc aaactcttct caatttttaa attactttct tcctatcctt ttgtaaaaac
3481 aatgccataa ggattataag gtcctttttc ccagttgttt agctctgcca aatcctggaa
3541 acggactacg tttcagataa annnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3601 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3661 natatgaatc tttcaaagct ctgaacaaac aaaagagcaa tggaaagaaa tatttttttc
3721 ttttgtatat aaaataattc attgaatgtc tcaataaatg tcattaaatt tttttctctt
3781 tttcatgttt ccattgtgca tgatgaaatg aagaccaaag aaagaaaaag atgggtaatt
3841 tggactttaa gttttgaaat atagtacatt cccgtctccc ccaaatttat atactgattt
3901 tgcacaaata atttttacat ataatgtctt ggataagccc attacttttt gatggnnnnn
3961 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4021 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnntttgg ttaagctttg tagcaatcta
4081 gtgattctct ttgcaaggca tgtaacaatg gctttgggtg gggaatgtgt cctctgctat
4141 ctacagctca agctccacag agatgcaact tacggccatc tttaagagac acagtgcaga
4201 agcaaaaagc cctgcaagtg acctcctgtc ttttgattcc aacaaaattg aaagtgagga
4261 agtctatcat ggaaccatgg aggaggacaa gcaaccagaa atctatctca cagctacaga
4321 cctcaaaagg ctgatcagca aagcactaga ggaagaacaa tctttggatg tggggacaat
4381 tcagttcact gatggtcagt taatgattgc ttagttctga gtttattctc attttggcag
4441 agactaagaa tgtgaatgtc tcatggaaac tgtcatttta acttgggtct tctaaagtcn
4501 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4561 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnt ttctatgcct ctggtttcct
4621 aatgatttgt tgtactactc cttaaggatt ggttattccg catatttcaa cctggactgt
4681 tttattgtcc caaccacaaa agaaaaagga aagatacatt caaatcttgt gattttttac
4741 ccatagaaat tgctggatca ctgccagcct ttggtcctga cacccaatca gagctgccca
4801 catcttttgc tgttataaca gaggtaagtt tgttgtcctt ttgttcttta actaggaaca
4861 aagtctcaaa accttccacc aaagaacaaa tcancttaag aaatgaacag agcaaaatcc
4921 cctttnccaa tgctaattaa acctttnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4981 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
5041 nnnnnnataa atcaaagtat cttagctgtt agttaagtct attcaggcag attcagttat
5101 ccgagaagca atagatctta ttttaccact gtatcaatgg atgttatcct tttagaacat
5161 atttctatat cagaaccttc ctccatagta gattcaagtc aacaacaaaa tagtttgcct
5221 aaatttaaat gaaaattttg aaatatgggt atagcccttc tcatatacat acaaacatcc
5281 tttctcaaca tctgtcttgc aaaattcatt cttcaggatg ctactttgag tccagaactt
5341 cctcctgttg aaccccagct tgagacagtg gacggagcag agcatggtct acctggtaag
5401 tttcccctca caaagtctat gttagatgac aacatangct ttgaggaatc ccattatgat
5461 actgcctcaa agaccagtga caaannnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
5521 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
5581 nnnnaaattt gctttttggt tgtatactac agatctacgc tttagctatg tattttctta
5641 agttaagctt aattttggat tttctttttt tcactttcta ttctttgggg aatacttgga
5701 cataatgaaa ttgtacttcc tccacagaca cttcttggtc tccacctgct atggcctcta
5761 cctccctgtc agaagctcca cctttcttta tggcatcaag catcttctct ctgactgatc
5821 aaggcaccac agatacaatg gccactgacc agacaatgct agtaccaggg ctcaccatcc
5881 ccaccagtga ttattctgca atcagccaac tggctctggg aatttcacat ccacctgcat
5941 cttcagatga cagccgatca agtgcaggtg gcgaagatat ggtcagacac ctagatgaaa
6001 tggatctgtc tgacactcct gccccatctg aggtaccaga gctcagcgaa tatgtttctg
6061 tcccagatca tttcttggag gataccactc ctgtctcagc tttacagtat atcaccacta
6121 gttctatgac cattgccccc aagggccgag agctggtagt gttcttcagt ctgcgtgttg
6181 ctaacatggc cttctccaac gacctgttca acaagagctc tctggagtac cgagctctgg
6241 agcaacaatt cacacagctg gtgagtgggc actgctcaca attccaattc tttgtctctt
6301 ctttctttgt tgttatttta taatataatt attggctgtc ttgagcaatt agtgttagta
6361 gaaacaaacc gccaagccag ctattgctga agacattcaa nnnnnnnnnn nnnnnnnnnn
6421 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
6481 nnnnnnnnnn nnnnnnnnnn aaaaggaact aaaatatatg tctcggttaa tgaaaagtga
6541 gtgtaagtgg aattagcagc agctgagcac ttagaacaca gttaagagga aaccatcttt
6601 tattttgcag ctggttccat atctacgatc caatcttaca ggatttaagc aacttgaaat
6661 acttaacttc agaaacggga gtgtgattgt gaatagcaaa atgaagtttg ctaagtcagt
6721 gccgtataac ctcaccaagg ctgtgcacgg ggtcttggag gattttcgtt ctgctgcagc
6781 ccaacaactc catctggaaa tagacagcta ctctctcaac attgaaccag gtaaaagaat
6841 ccaacccaga aagtggtaga gatgttttgt tcattttttt aatttccgtt ctgtttttaa
6901 gcacacgttt caatctttag gccacaaaaa tcaaactgaa atgataccnn nnnnnnnnnn
6961 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
7021 nnnnnnnnnn nnnnnnnnnn nnnnnnnncc tttgactgct gccagttcca ttgcttagct
7081 attcatacat gcgttaaaat ctgccccatt tcttacagct gatcaagcag atccctgcaa
7141 gttcctggcc tgcggcgaat ttgcccaatg tgtaaagaac gaacggactg aggaagcgga
7201 gtgtcgctgc aaaccaggat atgacagcca ggggagcctg gacggtctgg aaccaggcct
7261 ctgtggccct ggcacaaagg aatgcgaggt cctccaggga aagggagctc catgcaggtg
7321 ggtcaagcat gctaacgtca cagactcaag aactcattac ttacacttct gagaaaccca
7381 tcattagagt aaattcatat ggtcctttca acccatggtt tttaaacttt agtgagcgta
7441 gaaatcaccc agaaaagggc cctgttaaaa caacatggct gcaccctact atgccctgtt
7501 tctgattcag taggtctgga tggggnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
7561 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
7621 nnnnntgatg ttaaaactaa aacagtagaa agatgtagtt actattaatg ttgataagcc
7681 caagaaacaa gatactatgt ttttgctttc ttttgtaggt tgccagatca ctctgaaaat
7741 caagcataca aaactagtgt taaaaagttc caaaatcaac aaaataacaa ggtaaaatca
7801 tactttctaa gttggttgca attactaaac ttgacttttn naggaaattn aaaacattta
7861 tgtccctctt attttaaata gagataagca agatactttt tatttttaat ttactgtttt
7921 aagggggtga cattttctag tgcaaggata gagtcagaag gctgggatta accaaatgtg
7981 tagataaaca cagatacaaa catcannnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
8041 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
8101 nnnnnctctt agtcaaggcc agaacaagta tcaatgctga ttattcctgg ctatgtggat
8161 ttctgtgttg acagagcatt cagaggagca catgggttcc ctgaggaagc atgctataat
8221 acactaatgg tgtctactat ggttggatgg aaaatggtga ctcattcaca gactatctgc
8281 cactcctgct ctatgagatg ggtcagcctg agaatctaaa taggcttaag agggcatgga
8341 gtacatttct agtaggttat aaagttaaga atattttgag gccatcttca acatttcaaa
8401 gaagatgtca taaatgcaag cacatcctct tatctaccag tggcagtaat attggaatga
8461 ccattggttt gaccttgggt ggcatttctt aagttcttaa aactatttct ctttcaggta
8521 atcagtaaaa gaaattctga attactgacc gtagaatatg aagaatttaa ccatcaagat
8581 tgggaaggaa attaaaaact gaaaatgtac aattatcatt taggctatct caagagagat
8641 gatttgcctt ctcaaggaaa atggagacag gcatattcat gggtcatcaa aatccagaca
8701 tacagtcaac actgagaatc agcacacacc atatttcaaa tatagaagag tcatgtactt
8761 ggcaaccagt aaattctgaa gaaaaaagac acttacttat tattaaaacc ccaaatgcaa
8821 tcagcgaaac atatttttac tattcttgga tgatagtcaa aatgatcata agccaggttt
8881 gcttccacct tccctgaaaa ttttactcac agatcatttg caacaagcat agcttactta
8941 ttgtttaggg actgaacaat ttattgggaa gcaaactctt tatatgctag aaagtacatt
9001 taaaagatga ctacttacgc agggagatgc aggtctctct aaacgcatga atgtatgtag
9061 tgtgtaggca ctgtagtgag tgtatatatg ctccacacta cgtctgataa acacaaacct
9121 cagtattcag ttattaggca cactagtttt atacgcaact actgcttaca tagtagactg
9181 ttttgttgcc aataatcttt gaattgttct ttaaaagaaa ctgaggttca gatacacata
9241 ccatggaaaa atcttacttt tcttgttact acacaaagct attttaaaga agatgctatg
9301 ttgggagaag ggcgaagttg tactatatga cataatcaat
//