LOCUS HSAF000994 6476 bp mRNA linear HUM 31-OCT-1997 DEFINITION Homo sapiens ubiquitous TPR motif, Y isoform (UTY) mRNA, alternative transcript 3, complete cds. ACCESSION AF000994 VERSION AF000994.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 6476) AUTHORS Lahn,B.T. and Page,D.C. TITLE Functional coherence of the human Y chromosome JOURNAL Science 278 (5338), 675-680 (1997) PUBMED 9381176 REFERENCE 2 (bases 1 to 6476) AUTHORS Lahn,B.T. and Page,D.C. TITLE Direct Submission JOURNAL Submitted (23-APR-1997) Whitehead Institute, 9 Cambridge Center, Cambridge, MA 02142, USA FEATURES Location/Qualifiers source 1..6476 /db_xref="H-InvDB:HIT000061612" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="Y" gene 1..6476 /gene="UTY" /note="X/Y homologous gene" CDS 1006..5049 /gene="UTY" /note="alternative transcript 3" /codon_start=1 /product="ubiquitous TPR motif, Y isoform" /protein_id="AAC51841.1" /translation="MKSCAVSLTTAAVAFGDEAKKMAEGKASRESEEESVSLTVEERE ALGGMDSRLFGFVRLHEDGARTKTLLGKAVRCYESLILKAEGKVESDFFCQLGHFNLL LEDYSKALSAYQRYYSLQADYWKNAAFLYGLGLVYFYYNAFHWAIKAFQDVLYVDPSF CRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAHLYETQRKY HSAKEAYEQLLQTENLPAQVKATVLQQLGWMHHNMDLVGDKATKESYAIQYLQKSLEA DPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDA LQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNAARSKRCSNTSTLAARIK FLQNGSDNWNGGQSLSHHPVQQVYSLCLTPQKLQHLEQLRANRDNLNPAQKHQLEQLE SQFVLMQQMRHKEVAQVRTTGIHNGAITDSSLPTNSVSNRQPHGALTRVSSVSQPGVR PACVEKLLSSGAFSAGCIPCGTSKILGSTDTILLGSNCIAGSESNGNVPYLQQNTHTL PHNHTDLNSSTEEPWRKQLSNSAQGLHKSQSSCLSGPNEEQPLFSTGSAQYHQATSTG IKKANEHLTLPSNSVPQGDADSHLSCHTATSGGQQGIMFTKESKPSKNRSLVPETSRH TGDTSNGCADVKGLSNHVHQLIADAVSSPNHGDSPNLLIADNPQLSALLIGKANGNVG TGTCDKVNNIHPAVHTKTDHSVASSPSSAISTATPSPKSTEQRSINSVTSLNSPHSGL HTVNGEGLGKSQSSTKVDLPLASHRSTSQILPSMSVSICPSSTEVLKACRNPGKNGLS NSCILLDKCPPPRPPTSPYPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPKNPV TVIRGLAGALKLDLGLFSTKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWRCES NRSHTTIAKYAQYQASSFQESLREENEKRTQHKDHSDNESTSSENSGRRRKGPFKTIK FGTNIDLSDNKKWKLQLHELTKLPAFARVVSAGNLLTHVGHTILGMNTVQLYMKVPGS RTPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLED LYEANVPVYRFIQRPGDLVWINAGTVHWVQTVGWCNNIAWNVGPLTACQYKLAVERYE WNKLKSVKSPVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQYQTLREALVAAGK EVIWHGRTNDEPAHYCSICEVEVFNLLFVTNESNTQKTYIVHCHDCARKTSKSLENFV VLEQYKMEDLIQVYDQFTLALSLSSSS" BASE COUNT 1947 a 1281 c 1337 g 1911 t ORIGIN 1 gctcatcgtt tgttgtttag ataatatcat gaactgataa atgcagttgc cacgttgatt 61 ccctagggcc tggcttaccg actgaggtca taagatatta tgccttctct ttagacttgg 121 tcagtggaga ggaaatgggc aaagaaccag cctatggagg tgacaaggcc ttagggccaa 181 aagtcttgag ggtgaaggtt tagggcctgc gcagcttccc tgccatgccc cgcaaggtct 241 cgcattcgca aggcttgtga cagtgggagc ctcattacgg actctcctaa agtccatggt 301 gtcctctttt cgcatttgcg ccccgtgggt gatgcccgat gccgcccttc ccatcgctct 361 cttccccttc aagcgtatcg caactgcaaa aacacccagc acagacactc cattttctat 421 cttaatgcat ttaactagca caacctacag gttgttccat cccagagact acccttttct 481 ccatagacgt gaccatcaac caaccagcgg tcagaatcag tcagcctctg tcatgttcct 541 aggtccttgg cgaactggct gggcggggtc ccagcagcct aggagtacag tggagcaatg 601 cctgacgtaa gtcaacaaag atcacgtgag acgaatcagt cgcctagatt ggctacaact 661 aagtggttgg gagcggggag gtcgcggcgg ctgcgtgggg ttcgcccgtg acacaattac 721 aactttgtgc tggtgctggc aaagtttgtg attttaagaa attctgctgt gctctccagc 781 actgcgagct tctgccttcc ctgtagtttc ccagatgtga tccaggtagc cgagttccgc 841 tgcccgtgct tcggtagctt aagtctttgc ctcagctttt ttccttgcag ccgctgagga 901 ggcgataaaa ttggcgtcac agtctcaagc agcgattgaa ggcgtctttt caactactcg 961 attaaggttg ggtatcgtcg tgggacttgg aaatttgttg tttccatgaa atcctgcgca 1021 gtgtcgctca ctaccgccgc tgttgccttc ggtgatgagg caaagaaaat ggcggaagga 1081 aaagcgagcc gcgagagtga agaggagtct gttagcctga cagtcgagga aagggaggcg 1141 cttggtggca tggacagccg tctcttcggg ttcgtgaggc ttcatgaaga tggcgccaga 1201 acgaagaccc tactaggcaa ggctgttcgc tgctacgaat ctttaatctt aaaagctgaa 1261 ggaaaagtgg agtctgactt cttttgccaa ttaggtcact tcaacctctt gttggaagat 1321 tattcaaaag cattatctgc atatcagaga tattacagtt tacaggctga ctactggaag 1381 aatgctgcgt ttttatatgg ccttggtttg gtctacttct actacaatgc atttcattgg 1441 gcaattaaag catttcaaga tgtcctttat gttgacccca gcttttgtcg agccaaggaa 1501 attcatttac gacttgggct catgttcaaa gtgaacacag actacaagtc tagtttaaag 1561 cattttcagt tagccttgat tgactgtaat ccatgtactt tgtccaatgc tgaaattcaa 1621 tttcatattg cccatttgta tgaaacccag aggaagtatc attctgcaaa ggaggcatat 1681 gaacaacttt tgcagacaga aaaccttcct gcacaagtaa aagcaactgt attgcaacag 1741 ttaggttgga tgcatcataa tatggatcta gtaggagaca aagccacaaa ggaaagctat 1801 gctattcagt atctccaaaa gtctttggag gcagatccta attctggcca atcgtggtat 1861 tttcttggaa ggtgttattc aagtattggg aaagttcagg atgcctttat atcttacagg 1921 caatctattg ataaatcaga agcaagtgca gatacatggt gttcaatagg tgtgttgtat 1981 cagcagcaaa atcagcctat ggatgcttta caggcatata tttgtgctgt acaattggac 2041 catgggcatg ccgcagcctg gatggaccta ggtactctct atgaatcctg caatcaacct 2101 caagatgcca ttaaatgcta cctaaatgca gctagaagca aacgttgtag taatacctct 2161 acgcttgctg caagaattaa atttctacag aatggttctg ataactggaa tggtggccag 2221 agtctttcac atcatccagt acagcaagtt tattcgttgt gtttgacacc acagaaatta 2281 cagcacttgg aacaactgcg agcaaataga gataatttaa atccagcaca gaagcatcag 2341 ctggaacagt tagaaagtca gtttgtctta atgcagcaaa tgagacacaa agaagttgct 2401 caggtacgaa ctactggaat tcataacggg gccataactg attcatcact gcctacaaac 2461 tctgtctcta atcgacaacc acatggtgct ctgaccagag tatctagcgt ctctcagcct 2521 ggagttcgcc ctgcttgtgt tgaaaaactt ttgtccagtg gagctttttc tgcaggctgt 2581 attccttgtg gcacatcaaa aattctagga agtacagaca ctatcttgct aggcagtaat 2641 tgtatagcag gaagtgaaag taatggaaat gtgccttacc tgcagcaaaa tacacacact 2701 ctacctcata atcatacaga cctgaacagc agcacagaag agccatggag aaaacagcta 2761 tctaactccg ctcaggggct tcataaaagt cagagttcat gtttgtcagg acctaatgaa 2821 gaacaacctc tgttttccac tgggtcagcc cagtatcacc aggcaactag cactggtatt 2881 aagaaggcga atgaacatct cactctgcct agtaattcag taccacaggg ggatgctgac 2941 agtcacctct cctgtcatac tgctacctca ggtggacaac aaggcattat gtttaccaaa 3001 gagagcaagc cttcaaaaaa tagatccttg gtgcctgaaa caagcaggca tactggagac 3061 acatctaatg gctgtgctga tgtcaaggga ctttctaatc atgttcatca gttgatagca 3121 gatgctgttt ccagtcctaa ccatggagat tcaccaaatt tattaattgc agacaatcct 3181 cagctctctg ctttgttgat tggaaaagcc aatggcaatg tgggtactgg aacctgcgac 3241 aaagtgaata atattcaccc agctgttcat acaaagactg atcattctgt tgcctcttca 3301 ccctcttcag ccatttccac agcaacacct tctcctaaat ccactgagca gagaagcata 3361 aacagtgtta ccagccttaa cagtcctcac agtggattac acacagtcaa tggagagggg 3421 ctggggaagt cacagagctc tacaaaagta gacctgcctt tagctagcca cagatctact 3481 tctcagatct taccatcaat gtcagtgtct atatgcccca gttcaacaga agttctgaaa 3541 gcatgcagga atccaggtaa aaatggcttg tctaatagct gcattttgtt agataaatgt 3601 ccacctccaa gaccaccaac ttcaccatac ccacccttgc caaaggacaa gttgaatcca 3661 cccacaccta gtatttactt ggaaaataaa cgtgatgctt tctttcctcc attacatcaa 3721 ttttgtacaa atccaaaaaa ccctgttaca gtaatacgtg gccttgctgg agctcttaaa 3781 ttagatcttg gacttttctc taccaaaact ttggtagaag ctaacaatga acatatggta 3841 gaagtgagga cacagttgct gcaaccagca gatgaaaact gggatcccac tggaacaaag 3901 aaaatctggc gttgtgaaag caatagatct catactacaa ttgccaaata cgcacaatac 3961 caggcttcct ccttccagga atcattgaga gaagaaaatg agaaaagaac acaacacaaa 4021 gatcattcag ataacgaatc cacatcttca gagaattctg gaaggagaag gaaaggacct 4081 tttaaaacca taaaatttgg gaccaacatt gacctctctg ataacaaaaa gtggaagttg 4141 cagttacatg aactgactaa acttcctgct tttgcgcgtg tggtgtcagc aggaaatctt 4201 ctaacccatg ttgggcatac cattctgggc atgaatacag tacaactgta tatgaaagtt 4261 ccagggagtc ggacaccagg tcaccaagaa aataacaact tctgctctgt taacataaat 4321 attggtccag gagattgtga atggtttgtt gtacctgaag attattgggg tgttctgaat 4381 gacttctgtg aaaaaaataa tttgaatttt ttaatgagtt cttggtggcc caaccttgaa 4441 gatctttatg aagcaaatgt ccctgtgtat agatttattc agcgacctgg agatttggtc 4501 tggataaatg caggcactgt gcattgggtt caaactgttg gctggtgcaa taacattgcc 4561 tggaatgttg gtccacttac agcctgccag tataaattgg cagtggaacg gtatgaatgg 4621 aacaaattga aaagtgtgaa gtcaccagta cccatggtgc atctttcctg gaatatggca 4681 cgaaatatca aagtctcaga tccaaagctt tttgaaatga ttaagtattg tcttttgaaa 4741 attctgaagc aatatcagac attgagagaa gctcttgttg cagcaggaaa agaggttata 4801 tggcatgggc ggacaaatga tgaaccagct cattactgta gcatttgtga ggtggaggtt 4861 tttaatctgc tttttgtcac taatgaaagc aatactcaaa aaacctacat agtacattgc 4921 catgattgtg cacgaaaaac aagcaaaagt ttggaaaatt ttgtggtgct cgaacagtac 4981 aaaatggagg acctaatcca agtttatgat caatttacac tagctctttc attatcatcc 5041 tcatcttgat atagttccat gaatattaaa tgagattatt tctgctcttc aggaaatttc 5101 tgcaccactg gttttgtagc tgtttcataa aactgttgac taaaagctat gtctatgcaa 5161 ccttccaaga atagtatgtc aagcaactgg acacagtgct gcctctgctt caggacttaa 5221 catgctgatc cagctgtact tcagaaaaat aatattaatc atatgttttg tgtacgtatg 5281 acaaactgtc aaagtgacac agaatactga tttgaagata gcctttttta tgtttctcta 5341 tttctgggct gatgaattaa tattcatttg tattttaacc ctgcagaatt ttccttagtt 5401 aaaaacactt tcctagctgg tcatttcttc ataagatagc aaatttaaat ctctcctcga 5461 tcagctttta aaaaatgtgt actattatct gaggaagttt tttactgctt tatgtttttg 5521 tgtgttttga ggccatgatg attacatttg tggttccaaa ataatttttt taaatattaa 5581 tagcccatat acaaagataa tggattgcac atagacaaag aaataaactt cagatttgtg 5641 atttttgttt ctaaacttga tacagattta cactatttat aaatacgtat ttattgcctg 5701 aaaatatttg tgaatggaat gttgtttttt tccagacgta actgccatta aatactaagg 5761 agttctgtag ttttaaacac tactcctatt acattttata tgtgtagata aaactgctta 5821 gtattataca gaaattttta ttaaaattgt taaatgttta aagggtttcc caatgtttga 5881 gtttaaaaaa gactttctga aaaaatccac tttttgttca ttttcaaacc taatgattat 5941 atgtatttta tatgtgtgtg tatgtgtaca cacatgtata atatatacag aaacctcgat 6001 atataattgt atagatttta aaagttttat tttttacatc tatggtagtt tttgaggtgc 6061 ctattataaa gtattacgga agtttgctgt ttttaaagta aatgtctttt agtgtgattt 6121 attaagttgt agtcaccata gtgatagccc ataaataatt gctggaaaat tgtattttat 6181 aacagtagaa aacatatagt cagtgaagta aatattttaa aggaaacatt atatagattt 6241 gataaatgtt gtttataatt aagagtttct tatggaaaag agattcagaa tgataacctc 6301 ttttagagaa caaataagtg acttattttt ttaaagctag atgactttga aatgctatac 6361 tgtcctgctt gtacaacatg gtttggggtg aaggggagga aagtattaaa aaatctatat 6421 cgctagtaaa ttgtaataag ttctattaaa acttgtattt catatgaaaa aaaaaa //