LOCUS AB593127 4439 bp mRNA linear HUM 24-AUG-2011
DEFINITION Homo sapiens IMPG2 mRNA for interphotoreceptor matrix proteoglycan
2, complete cds, clone: HP08405-RBd54F07.
ACCESSION AB593127
VERSION AB593127.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4439)
AUTHORS Kato,S.
TITLE Direct Submission
JOURNAL Submitted (05-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Seishi Kato
National Rehabilitation Center for Persons with Disabilities,
Research Institute, Department of Rehabilitation Engineering; 4-1
Namiki, Tokorozawa, Saitama 359-8555, Japan
URL :http://www.rehab.go.jp/
REFERENCE 2
AUTHORS Oshikawa,M., Tsutsui,C., Ikegami,T., Fuchida,Y., Matsubara,M.,
Toyama,S., Usami,R., Ohtoko,K. and Kato,S.
TITLE Full-Length Transcriptome Analysis of Human Retina-Derived Cell
Lines ARPE-19 and Y79 Using the Vector-Capping Method
JOURNAL Invest. Ophthalmol. Vis. Sci. 52, 6662-6670 (2011)
COMMENT For cDNA clones and library availability, please contact
RIKEN BioResource Center.
E-mail: dnabank@brc.riken.jp
URL:http://dna.brc.riken.jp/
FEATURES Location/Qualifiers
source 1..4439
/cell_line="Y79"
/cell_type="retinoblastoma"
/clone="HP08405-RBd54F07"
/clone_lib="pGCAP10/Y79 cDNA"
/db_xref="H-InvDB:HIT000563928"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="The library was prepared by Vector-capping method."
/organism="Homo sapiens"
CDS 195..3920
/codon_start=1
/gene="IMPG2"
/product="interphotoreceptor matrix proteoglycan 2"
/protein_id="BAJ84067.1"
/transl_table=1
/translation="MIMFPLFGKISLGILIFVLIEGDFPSLTAQTYLSIEEIQEPKSA
VSFLLPEESTDLSLATKKKQPLDRRETERQWLIRRRRSILFPNGVKICPDESVAEAVA
NHVKYFKVRVCQEAVWEAFRTFWDRLPGREEYHYWMNLCEDGVTSIFEMGTNFSESVE
HRSLIMKKLTYAKETVSSSELSSPVPVGDTSTLGDTTLSVPHPEVDAYEGASESSLER
PEESISNEIENVIEEATKPAGEQIAEFSIHLLGKQYREELQDSSSFHHQHLEEEFISE
VENAFTGLPGYKEIRVLEFRSPKENDSGVDVYYAVTFNGEAISNTTWDLISLHSNKVE
NHGLVELDDKPTVVYTISNFRDYIAETLQQNFLLGNSSLNPDPDSLQLINVRGVLRHQ
TEDLVWNTQSSSLQATPSSILDNTFQAAWPSADESITSSIPPLDFSSGPPSATGRELW
SESPLGDLVSTHKLAFPSKMGLSSSPEVLEVSSLTLHSVTPAVLQTGLPVASEERTSG
SHLVEDGLANVEESEDFLSIDSLPSSSFTQPVPKETIPSMEDSDVSLTSSPYLTSSIP
FGLDSLTSKVKDQLKVSPFLPDASMEKELIFDGGLGSGSGQKVDLITWPWSETSSEKS
AEPLSKPWLEDDDSLLPAEIEDKKLVLVDKMDSTDQISKHSKYEHDDRSTHFPEEEPL
SGPAVPIFADTAAESASLTLPKHISEVPGVDDYSVTKAPLILTSVAISASTDKSDQAD
AILREDMEQITESSNYEWFDSEVSMVKPDMQTLWTILPESERVWTRTSSLEKLSRDIL
ASTPQSADRLWLSVTQSTKLPPTTISTLLEDEVIMGVQDISLELDRIGTDYYQPEQVQ
EQNGKVGSYVEMSTSVHSTEMVSVAWPTEGGDDLSYTQTSGALVVFFSLRVTNMMFSE
DLFNKNSLEYKALEQRFLELLVPYLQSNLTGFQNLEILNFRNGSIVVNSRMKFANSVP
PNVNNAVYMILEDFCTTAYNTMNLAIDKYSLDVESGDEANPCKFQACNEFSECLVNPW
SGEAKCRCFPGYLSVEERPCQSLCDLQPDFCLNDGKCDIMPGHGAICRCRVGENWWYR
GKHCEEFVSEPVIIGITIASVVGLLVIFSAIIYFFIRTLQAHHDRSERESPFSGSSRQ
PDSLSSIENAVKYNPVYESHRAGCEKYEGPYPQHPFYSSASGDVIGGLSREEIRQMYE
SSELSREEIQERMRVLELYANDPEFAAFVREQQVEEV"
BASE COUNT 1262 a 899 c 1020 g 1258 t
ORIGIN
1 gtgagagcta ctttgaaagg acaaccattt ttctttccgc taatttataa tggttttgaa
61 gtggttgttc attctcaaac atagactttt aaatgttagg tctttcctat aactctttgt
121 tattggaagt ttcaaggatt tggacactca attaaggatt ctgtcctctc ctcattcctt
181 tggttttggc ccaaatgatt atgtttcctc tttttgggaa gatttctctg ggtattttga
241 tatttgtcct gatagaagga gactttccat cattaacagc acaaacctac ttatctatag
301 aggagatcca agaacccaag agtgcagttt cttttctcct gcctgaagaa tcaacagacc
361 tttctctagc taccaaaaag aaacagcctc tggaccgcag agaaactgaa agacagtggt
421 taatcagaag gcggagatct attctgtttc ctaatggagt gaaaatctgc ccagatgaaa
481 gtgttgcaga ggctgtggca aatcatgtga agtattttaa agtccgagtg tgtcaggaag
541 ctgtctggga agccttcagg actttttggg atcgacttcc tgggcgtgag gaatatcatt
601 actggatgaa tttgtgtgag gatggagtca caagtatatt tgaaatgggc acaaatttta
661 gtgaatctgt ggaacataga agcttaatca tgaagaaact gacttatgca aaggaaactg
721 taagcagctc tgaactgtct tctccagttc ctgttggtga tacttcaaca ttgggagaca
781 ctactctcag tgttccacat ccagaggtgg acgcctatga aggtgcctca gagagcagct
841 tggaaaggcc agaggagagt attagcaatg aaattgagaa tgtgatagaa gaagccacaa
901 aaccagcagg tgaacagatt gcagaattca gtatccacct tttggggaag cagtacaggg
961 aagaactaca ggattcctcc agctttcacc accagcacct tgaagaagaa tttatttcag
1021 aggttgaaaa tgcatttact gggttaccag gctacaagga aattcgtgta cttgaattta
1081 ggtcccccaa ggaaaatgac agtggcgtag atgtttacta tgcagttacc ttcaatggtg
1141 aggccatcag caataccacc tgggacctca ttagccttca ctccaacaag gtggaaaacc
1201 atggccttgt ggaactggat gataaaccca ctgttgttta tacaatcagt aacttcagag
1261 attatattgc tgagacattg cagcagaatt ttttgctggg gaactcttcc ttgaatccag
1321 atcctgattc cctgcagctt atcaatgtga gaggagtttt gcgtcaccaa actgaagatc
1381 tagtttggaa cacccaaagt tcaagtcttc aggcaacgcc gtcatctatt ctggataata
1441 cctttcaagc tgcatggccc tcagcagatg aatccatcac cagcagtatt ccaccacttg
1501 atttcagctc tggtcctccc tcagccactg gcagggaact ctggtcagaa agtcctttgg
1561 gtgatttagt gtctacacac aaattagcct ttccctcgaa gatgggcctc agctcttccc
1621 cagaggtttt agaggttagc agcttgactc ttcattctgt caccccggca gtgcttcaga
1681 ctggcttgcc tgtggcttct gaggaaagga cttctggatc tcacttggta gaagatggat
1741 tagccaatgt tgaagagtca gaagattttc tttctattga ttcattgcct tcaagttcat
1801 tcactcaacc tgtgccaaaa gaaacaatac catccatgga agactctgat gtgtccttaa
1861 catcttcacc atatctgacc tcttctatac cttttggctt ggactccttg acctccaaag
1921 tcaaagacca attaaaagtg agccctttcc tgccagatgc atccatggaa aaagagttaa
1981 tatttgacgg tggtttaggt tcagggtctg ggcaaaaggt agatctgatt acttggccat
2041 ggagtgagac ttcatcagag aagagcgctg aaccactgtc caagccgtgg cttgaagatg
2101 atgattcact tttgccagct gagattgaag acaagaaact agttttagtt gacaaaatgg
2161 attccacaga ccaaattagt aagcactcaa aatatgaaca tgatgacaga tccacacact
2221 ttccagagga agagcctctt agtgggcctg ctgtgcccat cttcgcagat actgcagctg
2281 aatctgcgtc tctaaccctc cccaagcaca tatcagaagt acctggtgtt gatgattact
2341 cagttaccaa agcacctctt atactgacat ctgtagcaat ctctgcctct actgataaat
2401 cagatcaggc agatgccatc ctaagggagg atatggaaca aattactgag tcatccaact
2461 atgaatggtt tgacagtgag gtttcaatgg taaagccaga tatgcaaact ttgtggacta
2521 tattgccaga atcagagaga gtttggacaa gaacttcttc cctagagaaa ttgtccagag
2581 acatattggc aagtacacca cagagtgctg acaggctctg gttatctgtg acacagtcta
2641 ccaaattgcc tccaaccaca atctccaccc tgctagagga tgaagtaatt atgggtgtac
2701 aggatatttc gttagaactg gaccggatag gcacagatta ctatcagcct gagcaagtcc
2761 aagagcaaaa tggcaaggtt ggtagttatg tggaaatgtc aacaagtgtt cactccacag
2821 agatggttag tgtggcttgg cccacagaag gaggagatga cttgagttat acccagactt
2881 caggagcttt ggtggttttc ttcagcctcc gagtgactaa catgatgttt tcagaagatc
2941 tgtttaataa aaactccttg gagtataaag ccctggagca aagattctta gaattgctgg
3001 ttccctatct ccagtcaaat ctcacggggt tccagaactt agaaatcctc aacttcagaa
3061 atggcagcat tgtggtgaac agtcgaatga agtttgccaa ttctgtccct cctaacgtca
3121 acaatgcggt gtacatgatt ctggaagact tttgtaccac tgcctacaat accatgaact
3181 tggctattga taaatactct cttgatgtgg aatcaggtga tgaagccaac ccttgcaagt
3241 ttcaggcctg taatgaattt tcagagtgtc tggtcaaccc ctggagtgga gaagcaaagt
3301 gcagatgctt ccctggatac ctgagtgtgg aagaacggcc ctgtcagagt ctctgtgacc
3361 tacagcctga cttctgcttg aatgatggaa agtgtgacat tatgcctggg cacggggcca
3421 tttgtaggtg ccgggtgggt gagaactggt ggtaccgagg caagcactgt gaggaatttg
3481 tgtctgagcc cgtgatcata ggcatcacta ttgcctccgt ggttggactt cttgtcatct
3541 tttctgctat catctacttc ttcatcagga ctctccaagc acaccatgac aggagtgaaa
3601 gagagagtcc cttcagtggc tccagcaggc agcctgacag cctctcatct attgagaatg
3661 ctgtgaagta caaccccgtg tatgaaagtc acagggctgg atgtgagaag tatgagggac
3721 cctatcctca gcatcccttc tacagctctg ctagcggaga cgtgattggt gggctgagca
3781 gagaagaaat cagacagatg tatgagagca gtgagctttc cagagaggaa attcaagaga
3841 gaatgagagt tttggaactg tatgccaatg atcctgagtt tgcagctttt gtgagagagc
3901 aacaagtgga agaggtttaa ccaaaactcc tgttctgaaa ctgattagaa gcctggagaa
3961 gatggagatt acttgttact tatgtcatat aattaacctg gattttaaac actgttggaa
4021 gaagagtttt ctatgaaaaa attaaatata gggcacactg tttttttttc agcttaagtt
4081 ttcagaatgt agtaagagat gttaccattt ttatttctat aaagactgaa tgctgtgttt
4141 aaataaattg aaaactacgt aaactctgga aagtattcta taagaaaaag ctggacctag
4201 gatttagggc tgcagttgct gtctgcttct gaatcactgg gggtgtctcc taagaactgt
4261 gcctcgggtt tttcaatagg aaaataaggt gagactcttc catggagaag tctggcttag
4321 taagggaata ttttggagca tatttgttat tgttgggtag aaggggaaac ctttgaaata
4381 gtcttaatgg atagtttata atcaggcatt catctaaata aaattctttc ttttttttg
//