LOCUS AB593115 8972 bp mRNA linear HUM 24-AUG-2011
DEFINITION Homo sapiens SEC16A mRNA for protein transport protein Sec16A,
complete cds, clone: HP07225-RBd18G07.
ACCESSION AB593115
VERSION AB593115.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 8972)
AUTHORS Kato,S.
TITLE Direct Submission
JOURNAL Submitted (05-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Seishi Kato
National Rehabilitation Center for Persons with Disabilities,
Research Institute, Department of Rehabilitation Engineering; 4-1
Namiki, Tokorozawa, Saitama 359-8555, Japan
URL :http://www.rehab.go.jp/
REFERENCE 2
AUTHORS Oshikawa,M., Tsutsui,C., Ikegami,T., Fuchida,Y., Matsubara,M.,
Toyama,S., Usami,R., Ohtoko,K. and Kato,S.
TITLE Full-Length Transcriptome Analysis of Human Retina-Derived Cell
Lines ARPE-19 and Y79 Using the Vector-Capping Method
JOURNAL Invest. Ophthalmol. Vis. Sci. 52, 6662-6670 (2011)
COMMENT For cDNA clones and library availability, please contact
RIKEN BioResource Center.
E-mail: dnabank@brc.riken.jp
URL:http://dna.brc.riken.jp/
FEATURES Location/Qualifiers
source 1..8972
/cell_line="Y79"
/cell_type="retinoblastoma"
/clone="HP07225-RBd18G07"
/clone_lib="pGCAP10/Y79 cDNA"
/db_xref="H-InvDB:HIT000563916"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="The library was prepared by Vector-capping method."
/organism="Homo sapiens"
CDS 320..7324
/codon_start=1
/gene="SEC16A"
/product="protein transport protein Sec16A"
/protein_id="BAJ84055.1"
/transl_table=1
/translation="MQPPPQTVPSGMAGPPPAGNPRSVFWASSPYRRRANNNAAVAPT
TCPLQPVTDPFAFSRQALQSTPLGSSSKSSPPVLQGPAPAGFSQHPGLLVPHTHARDS
SQGPCEPLPGPLTQPRAHASPFSGALTPSAPPGPEMNRSAEVGPSSEPEVQTLPYLPH
YIPGVDPETSHGGHPHGNMPGLDRPLSRQNPHDGVVTPAASPSLPQPGLQMPGQWGPV
QGGPQPSGQHRSPCPEGPVPSGVPCATSVPHFPTPSILHQGPGHEQHSPLVAPPAALP
SDGRDEVSHLQSGSHLANNSDPESTFRQNPRIVNHWASPELRQNPGVKNEHRPASALV
NPLARGDSPENRTHHPLGAGAGSGCAPLEADSGASGALAMFFQGGETENEENLSSEKA
GLSGQADFDDFCSSPGLGRPPAPTHVGAGSLCQALLPGPSNEAAGDVWGDTASTGVPD
ASGSQYENVENLEFVQNQEVLPSEPLNLDPSSPSDQFRYGPLPGPAVPRHGAVCHTGA
PDATLHTVHPDSVSSSYSSRSHGRLSGSARPQELVGTFIQQEVGKPEDEASGSFFKQI
DSSPVGGETDETTVSQNYRGSVSQPSTPSPPKPTGIFQTSANSSFEPVKSHLVGVKPF
EADRANVVGEVRETCVRQKQCRPAAALPDASPGNLEQPPDNMETLCAPQVCPLPLNST
TEAVHMLPHAGAPPLDTVYPAPEKRPSARTQGPVKCESPATTLWAQSELPDFGGNVLL
APAAPALYVCAKPQPPVVQPPEEAMSGQQSRNPSSAAPVQSRGGIGASENLENPPKMG
EEEALQSQASSGYASLLSSPPTESLQNPPVLIAQPDHSYNLAQPINFSVSLSNSHEKN
QSWREALVGDRPAVSSWALGGDSGENTSLSGIPTSSVLSLSLPSSVAQSNFPQGSGAS
EMVSNQPANLLVQPPSQPVPENLVPESQKDRKAGSALPGFANSPAGSTSVVLVPPAHG
TLVPDGNKANHSSHQEDTYGALDFTLSRTLENPVNVYNPSHSDSLASQQSVASHPRQS
GPGAPNLDRFYQQVTKDAQGQPGLERAQQELVPPQQQASPPQLPKAMFSELSNPESLP
AQGQAQNSAQSPASLVLVDAGQQLPPRPPQSSSVSLVSSGSGQAAVPSEQPWPQPVPA
LAPGPPPQDLAAYYYYRPLYDAYQPQYSLPYPPEPGAASLYYQDVYSLYEPRYRPYDG
AASAYAQNYRYPEPERPSSRASHSSERPPPRQGYPEGYYSSKSGWSSQSDYYASYYSS
QYDYGDPGHWDRYHYSARVRDPRTYDRRYWCDAEYDAYRREHSAFGDRPEKRDNNWRY
DPRFTGSFDDDPDPHRDPYGEEVDRRSVHSEHSARSLHSAHSLASRRSSLSSHSHQSQ
IYRSHNVAAGSYEAPLPPGSFHGDFAYGTYRSNFSSGPGFPEYGYPADTVWPAMEQVS
SRPTSPEKFSVPHVCARFGPGGQLIKVIPNLPSEGQPALVEVHSMEALLQHTSEQEEM
RAFPGPLAKDDTHKVDVINFAQNKAMKCLQNENLIDKESASLLWNFIVLLCRQNGTVV
GTDIAELLLRDHRTVWLPGKSPNEANLIDFTNEAVEQVEEEESGEAQLSFLTGGPAAA
ASSLERETERFRELLLYGRKKDALESAMKNGLWGHALLLASKMDSRTHARVMTRFANS
LPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLNNNMDVESRTMATM
GDTLASRGLLDAAHFCYLMAQAGFGVYTKKTTKLVLIGSNHSLPFLKFATNEAIQRTE
AYEYAQSLGAETCPLPSFQVFKFIYSCRLAEMGLATQAFHYCEAIAKSILTQPHLYSP
VLISQLVQMASQLRLFDPQLKEKPEEESLAAPTWLVHLQQVERQIKEGAGVWHQDGAL
PQQCPGTPSSEMEQLDRPGLSQPGALGIANPLLAVPAPSPEHSSPSVRLLPSAPQTLP
DGPLASPARVPMFPVPLPPGPLEPGPGCVTPGPALGFLEPSGPGLPPGVPPLQERRHL
LQEARSPDPGIVPQEAPVGNSLSELSEENFDGKFANLTPSRTVPDSEAPPGWDRADSG
PTQPPLSLSPAPETKRPGQAAKKETKEPKKGESWFFRWLPGKKKTEAYLPDDKNKSIV
WDEKKNQWVNLNEPEEEKKAPPPPPTSMPKTVQAAPPALPGPPGAPVNMYSRRAAGTR
ARYVDVLNPSGTQRSEPALAPADFVAPLAPLPIPSNLFVPTPVSSVRPQGRSGRNDGL
LALSSPDAEEPQLPDGTGREGPAAARGLANPEPAPEPKAPGDLPAAGGPPSGAMPFYN
PAQLAQACATSGSSRLGRIGQRKHLVLN"
BASE COUNT 1986 a 2643 c 2429 g 1914 t
ORIGIN
1 gcgaggagcg cgcccgcgtc agggccccgc gcttctcagc tgggcggagt agccgttctc
61 ggtgcgtgag cctgctggca tcggtcctgc agactgattt cccgcttgtg gccttgattg
121 aagaatccca tctcttctca catcttaaaa cgaaaaaaga ctgggagaaa gagccagcgt
181 aaacagggcg acgtactggg acggccccgg cgcgcctggc cgggcaggtg gcgaggggcg
241 gggccaagcg ctccaattaa ggaacagcta tatcctgctt ccttctgtaa gcagcatcga
301 cttgtgcaag ggttcagtca tgcagccacc gccccagacg gtcccgtctg gcatggctgg
361 gccacctcca gccgggaatc ctcggagcgt gttctgggct agcagccctt acaggagacg
421 ggctaataat aatgcagcag tggctccgac aacttgcccg ttgcagccgg tcacggatcc
481 atttgctttt agtagacagg cgctccaaag tacaccactg ggcagttcgt ccaaaagcag
541 tccacctgtc ttgcaaggcc cagcccccgc agggttttct cagcaccccg gtttgcttgt
601 gcctcacaca catgccagag atagctctca gggaccctgt gagcccctgc ctggacctct
661 gacacagccc agagcacatg ccagtccgtt ttctggtgca ttgacacctt cagcacctcc
721 tgggcctgag atgaacagga gtgcagaggt cggtcccagt tcagagcctg aagttcagac
781 tctgccatat cttcctcact acattccagg agtggatcct gaaacgtctc atgggggcca
841 ccctcatggg aacatgcctg ggctcgaccg acccctgagc aggcaaaacc cacatgacgg
901 tgtggtcacc ccagcagcat ccccttccct ccctcagcct ggtctgcaga tgccaggaca
961 gtgggggcca gtgcagggag gcccacagcc ctcggggcaa catcgttcac cctgccctga
1021 aggacctgtt cccagcgggg tgccctgtgc caccagcgtt cctcatttcc ccaccccgtc
1081 catcctacat cagggccctg gtcatgagca acacagccct ctggtggctc ccccagcagc
1141 cttgcccagt gatggaagag acgaggtgag ccacttgcaa agtggaagcc acctggccaa
1201 taactctgat cctgaaagta cattcaggca aaatcccaga attgtgaatc actgggcaag
1261 cccagagctc aggcagaatc caggagtgaa gaatgagcac cggcccgcct ctgctcttgt
1321 gaaccccctc gcccggggag atagcccaga aaaccgtacg caccacccac tgggggctgg
1381 ggccgggtct ggctgtgccc cgctagaagc agactcagga gcttcaggag ctctggcgat
1441 gtttttccaa gggggagaga cagaaaatga ggagaatctc tcatctgaaa aagcaggctt
1501 atctggtcaa gcggactttg acgatttctg ctccagccct gggctaggcc gtccgcccgc
1561 acctacacac gtgggggcag gcagcctctg ccaggccctt ctcccaggcc ccagcaatga
1621 ggctgctggt gatgtgtggg gtgacacagc gagcacaggg gtgccggatg ccagcggctc
1681 gcagtatgag aatgttgaga acttagaatt tgttcagaat caagaagttc tgccaagtga
1741 gcccctcaat ttggaccctt cctccccgag tgaccagttc agatatgggc cccttcctgg
1801 gccagctgtg cccaggcatg gtgctgtgtg ccacaccgga gcccctgatg ccacactgca
1861 tacagtgcac cctgacagcg tgtcatccag ctatagcagc agaagccacg gaaggctctc
1921 aggctcagcc aggccccagg agctggttgg cacattcatt cagcaagaag ttggaaaacc
1981 cgaggatgaa gcttcaggta gtttttttaa gcaaatcgat tcttctcccg taggaggtga
2041 aacagacgag accactgtga gccagaatta ccgtggcagc gtgtcccagc cctcaacccc
2101 gagccccccg aaacctacag gaatatttca gacaagtgca aatagttctt tcgaaccggt
2161 aaaatctcac ttagttgggg taaaaccatt tgaggcagat cgcgccaacg tggttggtga
2221 agtaagggag acctgtgtcc gccagaagca gtgcagacca gctgccgccc tgcccgatgc
2281 ttcccctggc aacctggagc agccaccaga caacatggag accctctgtg caccccaggt
2341 ctgtcccctg cctcttaact ccaccacgga agctgtgcac atgcttccgc acgcaggggc
2401 accgcccttg gatactgtgt atccagcacc cgagaagagg ccttcagcca ggacccaggg
2461 gcccgtgaag tgtgagagcc cagcaacgac tctgtgggcg caaagtgagc tgccagattt
2521 tggaggcaac gtccttctgg cccctgcagc cccggcgctt tatgtgtgtg caaaacctca
2581 gccacctgtt gttcagcctc cagaagaggc gatgtccggg cagcagtcac ggaacccaag
2641 ctcggcggcc ccggtgcaga gccgaggtgg cattggtgct tctgagaacc ttgagaatcc
2701 tcccaaaatg ggagaggagg aggcccttca gtcccaggcg agttctggtt atgcaagttt
2761 attatcctca ccgcccactg agtctctgca gaatcctcca gtcttgattg ctcagcctga
2821 tcacagctat aatctggctc agcccattaa cttttctgtg tccttatcga actctcatga
2881 gaagaatcag tcctggagag aggctttggt gggggataga cctgcagtca gcagttgggc
2941 tctcggtggt gattctgggg agaacacttc tttgtctggg attccaacca gctctgtcct
3001 tagcttgtct ctgcctagca gtgttgccca aagtaatttt ccacaaggtt ctggtgcttc
3061 cgaaatggtt tctaatcagc ctgctaattt gctggttcaa ccaccatccc agccagttcc
3121 agagaacttg gttccagaaa gtcaaaagga tcgtaaggca ggaagtgctc ttcccggatt
3181 tgctaatagc cctgctggaa gcacaagtgt ggtgttagtt ccacctgcac acggcaccct
3241 ggtgcctgat ggtaataagg caaaccattc cagtcatcag gaagacactt acggagccct
3301 agactttacc ttaagcagga ctttggaaaa tcctgtaaac gtgtacaacc cgtcccattc
3361 tgacagcctc gcttctcagc aaagtgttgc cagtcatccc agacaatctg ggcctggggc
3421 gcctaacctt gaccgttttt atcagcaggt cacgaaagat gcccagggcc agcctggcct
3481 cgaaagagcc cagcaggagc tggtgccacc ccagcaacag gcttctcccc cacaactacc
3541 caaagccatg ttttcggagc tgtcaaatcc agaaagtctg cccgcacagg gacaggccca
3601 gaactcagca cagtcaccag caagtctggt tctggtcgac gcgggtcagc agctgccccc
3661 tcggcctcct cagtcctcta gcgtgtctct ggtgtccagt ggctctggcc aggcagctgt
3721 gccgtcagag cagccgtggc cacagccagt gcctgcactt gcccccggcc caccgcctca
3781 ggacctggcc gcctactact actaccggcc tttgtacgat gcctaccagc ctcagtactc
3841 tttgccgtac ccaccggagc ctggcgcagc ctccctctat taccaggatg tctacagcct
3901 ctatgagcct cgatacaggc cctatgatgg tgctgcgtct gcttacgccc agaactaccg
3961 ctatcccgag cccgagcggc ccagctcccg agccagccac tcctcggaac ggccacctcc
4021 caggcaagga tatcctgaag gatactatag ttccaaaagt ggatggagca gtcagagcga
4081 ttactatgca agctattact ccagccagta cgattatgga gatccaggtc actgggatcg
4141 ttaccactac agtgctagag tcagggaccc ccgcacctat gaccggaggt attggtgtga
4201 tgcagagtat gacgcataca ggagagagca ctctgccttc ggggacaggc ccgagaaacg
4261 tgacaacaac tggaggtacg atcctcgctt cacggggagt tttgacgatg accccgatcc
4321 gcacagagac ccttatgggg aagaggtgga ccggcgcagc gtccacagcg agcactcggc
4381 acggagcctg cacagcgcac acagcctggc cagccgccgc agcagcctca gctcccactc
4441 gcaccagagt cagatttaca gaagccacaa tgtggctgcc ggttcctacg aggccccgct
4501 tcctccaggc tcctttcacg gcgattttgc ctacggcacc taccgcagca atttcagcag
4561 tggccccggc ttcccagagt atggctaccc tgccgacacc gtctggcctg ccatggagca
4621 agtttcatca agaccaactt ctcctgaaaa attttcagtg cctcatgtct gtgccaggtt
4681 tggccctggc ggtcagctta tcaaagtgat tcccaatctg ccttcagaag gacagccggc
4741 cttggtggag gtccacagca tggaggcctt gctgcagcac acgtctgagc aggaggagat
4801 gcgggcgttc ccgggacccc tggccaaaga cgacacccat aaggtggatg tcattaattt
4861 tgcacagaac aaagctatga aatgtttgca gaatgaaaac ttaattgaca aagagtctgc
4921 aagtcttctt tggaatttta ttgttctctt atgcagacaa aatgggaccg tggtagggac
4981 cgacattgcg gagcttctgt tacgagacca cagaacagtg tggcttcctg ggaagtcgcc
5041 caatgaagca aacctgattg atttcacgaa tgaggcagtg gagcaggtgg aagaggagga
5101 gtctggtgag gcccagctct ctttcctcac tggtggtccg gcggctgccg ccagctcgct
5161 cgagagagag accgagaggt tcagggagct gttgctgtat ggccgtaaga aggatgcttt
5221 ggagtctgca atgaagaatg gcctgtgggg tcacgctctg ctacttgcaa gtaagatgga
5281 cagccggaca cacgcccgag tcatgaccag gtttgctaac agcctcccaa tcaacgaccc
5341 tctgcagaca gtctaccagc tcatgtccgg acggatgcct gccgcgtcca cgtgctgtgg
5401 agacgagaaa tggggagatt ggaggccgca cctcgccatg gtcttgtcca acttgaacaa
5461 caacatggac gtcgagtcca ggacgatggc taccatgggc gacactctgg cttcaagggg
5521 cctcttggat gcggcccact tctgctacct catggcccag gcgggatttg gtgtttacac
5581 gaagaaaact acaaagcttg tcttaatcgg atccaatcac agtttgccat tcttaaagtt
5641 cgcaaccaac gaagcaatcc agaggacgga agcctatgag tacgcccagt ccctgggtgc
5701 cgagacctgc cccctgccta gtttccaggt gtttaagttc atctactcct gccgcctggc
5761 ggaaatgggg ctggccacgc aagccttcca ctactgtgag gccatcgcga agagcatcct
5821 gacgcagccg cacctgtatt ccccggtgtt gatcagccag cttgtgcaga tggcttccca
5881 gttacgactc ttcgatcccc agctgaaaga gaagccagaa gaggagtcct tggccgcacc
5941 cacgtggctg gttcacctgc agcaggtgga gcggcagatt aaggaggggg ctggagtatg
6001 gcatcaggat ggagccctcc cgcagcagtg tcctggcact ccgagttccg agatggagca
6061 gttggacagg ccaggactca gtcagccagg agccctgggg atcgccaacc ctctgctggc
6121 ggtgcctgca ccgagccctg agcactcgag cccgagcgtg cggctgctgc cctcagctcc
6181 gcagacgctc cctgacggcc cattggccag tcctgccaga gtgccgatgt tcccagtgcc
6241 actgcccccg gggcccctgg agccgggtcc tggctgtgtg accccagggc ctgcacttgg
6301 cttcctggag ccctccgggc ctggcctccc acctggtgtg ccacctctgc aggaaaggag
6361 acacttgctc caggaagcca ggagcccaga cccagggata gtgccgcagg aggcgcctgt
6421 tggaaactca ctttccgagc taagcgaaga aaattttgat ggaaaatttg ctaatctgac
6481 cccctcgagg acggtgccag actcggaggc ccccccaggg tgggatcgtg ccgactcggg
6541 tcccacgcag ccacctctgt ctctctcacc cgctcccgaa acaaagagac ccggacaggc
6601 agccaagaaa gaaacgaagg aacctaagaa gggtgaatcc tggttctttc gttggctacc
6661 tggaaagaaa aagacagaag cttatttgcc agatgacaag aacaaatcga ttgtttggga
6721 tgaaaagaaa aaccagtggg tgaatttaaa tgagccagaa gaggagaaga aagccccgcc
6781 cccacctcca acctcgatgc ccaagactgt gcaagctgcc ccgcctgccc tcccagggcc
6841 tcctggagcc cccgtgaaca tgtactctag aagagcagca ggaaccagag ctcgctacgt
6901 tgacgtcctg aacccaagcg ggacccagcg gagcgagccg gctctcgctc ctgcggactt
6961 tgtcgctcca ctcgcgccac tcccaattcc ttctaacttg ttcgtgccaa ccccagtgtc
7021 ttcagtgaga ccccagggac gttcgggacg gaatgatggc ctcctcgctc tctcatcccc
7081 agatgcagaa gaaccacagc ttccagacgg gactggcagg gaagggcctg cagcagctag
7141 gggcctggcc aatccagagc ctgccccaga gcccaaggct cctggcgacc tccctgctgc
7201 agggggccct cccagcgggg ccatgccctt ctacaaccct gctcagctgg cacaggcctg
7261 cgccacctcc gggagctcaa ggctagggag gattggccag aggaagcacc tggtgctgaa
7321 ctaggcttgc cctgctgtga acttgcactt ggagccctga cgctgctgtt ctccccgaag
7381 aacccgaccg acctccgcga tctccgtccc gcccccaggg agacacagca gtgactcaga
7441 gctggtcgca cactgtgcct ccctcctcac cgcccatcgt aatgaattat tttgaaaatt
7501 aattccacca tcctttcaga ttctggatgg aaagactgaa tctttgactc agaattgttt
7561 gccgaaaaga atgatgtgac tttcttagtc gtttaggatg atttaaggat atagtattcc
7621 tggtcattta agaatgttca ttcattgaag ctggagctgt ctctgccaca ggagagccac
7681 atggtcggta gtaaccaggg cctctccaag cccagctgtg agtcactgcc cagtgagtcc
7741 cgcgcttcct ttaaggtgct gggagcaaag agagggtgac tgaggcagac cccaacccct
7801 gctctgcacc atctgggccc tcgccgtgtt tgaacctggc tgaatgagtg gagggcgctg
7861 tgttctcaat cagcgcctcc gaggagccgt ggggttcctt cggcattagt tcacggtttt
7921 tgagagaggc cctagttact gcagtgaatt tctttcctgt tgcaaagacg cttccagcct
7981 cactttactt tctgtggcct gatgaggacc atgggtgatt ttgtgtaccc aaagcgctgg
8041 ggactgccca ccgtgtggcc cagtcactgg gaaggagccc cagagagccg gctgtctgac
8101 atgatggctc agggtggtca tccaggttga aaactgaccg tgtgatgttt gatttgggct
8161 tcatttcgtg tgtaggagca cggttagact cactgttaag gaagctggat gcacttctct
8221 aaaaggctgc actttccgtg agcacttttc gtggtacaat ccacatgacc cactttctcc
8281 cctgggggac gttggttcag aggttggtag cacttgggga gagtgtctta acacagtttc
8341 ttgacagcag ctctggaact tagtatttct gccccgagtt ttgccacact gagactttga
8401 gtagctcctg gtggactcaa ccctgttcaa ctcagagacg ggcctcctct cactgatgca
8461 aagctttaag gcttctctga ctgttctgaa actcttcgta ttcttgtcaa gtctaaagag
8521 actgaagaaa agatttaaat actaataaaa atcagtagat aatttctgta ggttctgctg
8581 gaggaataca aactgtttgg tgttttaaat ttaagtgtag aaattgtaga atgtggaatt
8641 agcacagatc cttcctggct ttctgtttca cttgatcatt tagcccagac cacccaggat
8701 gttttccaaa atgttccaca ggcgtgtccc gctggatcca tttgtccttg tcacttggag
8761 aaaggccagt ccctgtgacg gggcagccct ctctgtccct cggtcagctc gtgtgaatcc
8821 tgggacctct tccggtcggc tctgcccgct gttctggggt cgactgccac gacttttgat
8881 tcaagaagct tcctccaggc gggagcggct atttttccta aatgagaatt gttacattgc
8941 aaattgttga ataaaatatt ttgcgctcct tc
//