LOCUS       AB451343                1986 bp    mRNA    linear   HUM 02-SEP-2008
DEFINITION  Homo sapiens DDX3X mRNA for ATP-dependent RNA helicase DDX3X,
            partial cds, clone: FLJ08002AAAF.
ACCESSION   AB451343
VERSION     AB451343.1
KEYWORDS    Gateway cloning system.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1986)
  AUTHORS   Kawamura,Y., Nomura,N. and Goshima,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2008) to the DDBJ/EMBL/GenBank databases.
            Contact:Naoki Goshima
            Biomedicinal Information Research Center (BIRC), National
            Institute of Advanced Industrial Science and Technology (AIST);
            2-42 Aomi, Koto-ku, Tokyo 135-0064, Japan
REFERENCE   2
  AUTHORS   Goshima,N., Kawamura,Y., Fukumoto,A., Miura,A., Honma,R.,
            Satoh,R., Wakamatsu,A., Yamamoto,J.-I., Kimura,K., Nishikawa,T.,
            Andoh,T., Iida,Y., Ishikawa,K., Ito,E., Kagawa,N., Kaminaga,C.,
            Kanehori,K., Kawakami,B., Kenmochi,K.-I., Kimura,R., Kobayashi,M.,
            Kuroita,T., Kuwayama,H., Maruyama,Y., Matsuo,K., Minami,K.,
            Mitsubori,M., Mori,M., Morishita,R., Murase,A., Nishikawa,A.,
            Nishikawa,S., Okamoto,T., Sakagami,N., Sakamoto,Y., Sasaki,Y.,
            Seki,T., Sono,S., Sugiyama,A., Sumiya,T., Takayama,T.,
            Takayama,Y., Takeda,H., Togashi,T., Yahata,K., Yamada,H.,
            Yanagisawa,Y., Endo,Y., Imamoto,F., Kisu,Y., Tanaka,S., Isogai,T.,
            Imai,J.-I., Watanabe,S. and Nomura,N.
  TITLE     Human Protein Factory: an infrastructure to convert the human
            transcriptome into the in vitro-expressed human proteome of
            versatile utility
  JOURNAL   Unpublished (2008)
COMMENT     This human Gateway entry clone was constructed by recombining an
            attB-attached open reading frame (ORF) fragment with attP
            sequences of the Gateway donor vector pDONR201. The ORF sequence
            in the entry clone is flanked with attL1 sequence (100 nt) -
            spacer nucleotides (TC) - Shine-Dalgano sequence (GAAGGAGATA) -
            spacer nucleotides (GA) - Kozak sequence (ACC) upstream of the
            translational initiation codon (ATG) and is also flanked with
            spacer nucleotides (TATG) - attL2 sequence (99 nt) downstream of
            the ORF. This is an F-type clone that deletes the stop codon for
            C-terminal tagged proteins. DNA sequences of the entire ORF and
            flanking regions were validated by sequencing. Clone structure of
            the ORF and flanking sequences is as follows:
            5'-caaataatgattttattttgactgatagtgacctgttcgttgcaacaaattgatgagcaatgct
            tttttataatgccaactttgtacaaaaaagcaggct TC GAAGGAGATA GA ACC 5'ORF3'
            TATG acccagctttcttgtacaaagttggcattataagaaagcattgcttatcaatttgttgcaac
            gaacaggtcactatcagtcaaaataaaatcattattg-3' (5'ORF3'; ORF sequence.
            attL sequences are described in lower cases).
            Clone information: http://www.HGPD.jp/
            This clone was produced in the "Functional Analysis of Protein and
            Research Application" project supported by the New Energy and
            Industrial Technology Development Organization (NEDO), Japan
FEATURES             Location/Qualifiers
     source          1..1986
                     /clone="FLJ08002AAAF"
                     /db_xref="H-InvDB:HIT000487556"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="Vector: pDONR201"
                     /organism="Homo sapiens"
     CDS             1..>1986
                     /codon_start=1
                     /gene="DDX3X"
                     /product="ATP-dependent RNA helicase DDX3X"
                     /protein_id="BAG70157.1"
                     /transl_table=1
                     /translation="MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLR
                     NREATKGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRS
                     DYDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINF
                     EKYDDIPVGATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKR
                     DLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTR
                     ELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERG
                     KIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQML
                     ARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVET
                     KKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS
                     NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQE
                     VPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGARDYRQSSGASSSSFSSSRASSSRSG
                     GGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN"
BASE COUNT          570 a          369 c          545 g          502 t
ORIGIN      
        1 atgagtcatg tggcagtgga aaatgcgctc gggctggacc agcagtttgc tggcctagac
       61 ctgaactctt cagataatca gagtggagga agtacagcca gcaaagggcg ctatattcct
      121 cctcatttaa ggaaccgaga agctactaaa ggtttctacg ataaagacag ttcagggtgg
      181 agttctagca aagataagga tgcgtatagc agttttggat ctcgtagtga ttcaagaggg
      241 aagtctagct tcttcagtga tcgtggaagt ggatcaaggg gaaggtttga tgatcgtgga
      301 cggagtgatt acgatggcat tggcagccgt ggtgacagaa gtggctttgg caaatttgaa
      361 cgtggtggaa acagtcgctg gtgtgacaaa tcagatgaag atgattggtc aaaaccactc
      421 ccaccaagtg aacgcttgga acaggaactc ttttctggag gcaacactgg gattaatttt
      481 gagaaatacg atgacattcc agttggggca acaggcaaca actgtcctcc acatattgaa
      541 agtttcagtg atgttgagat gggagaaatt atcatgggaa acattgagct tactcgttat
      601 actcgcccaa ctccagtgca aaagcatgct attcctatta tcaaagagaa aagagacttg
      661 atggcttgtg cccaaacagg gtctggaaaa actgcagcat ttctgttgcc catcttgagt
      721 cagatttatt cagatggccc aggcgaggct ttgagggcca tgaaggaaaa tggaaggtat
      781 gggcgccgca aacaataccc aatctccttg gtattagcac caacgagaga gttggcagta
      841 cagatctacg aggaagccag aaaattttca taccgatcta gagttcgtcc ttgcgtggtt
      901 tatggtggtg ccgatattgg tcagcagatt cgagacttgg aacgtggatg ccatttgtta
      961 gtagccactc caggacgtct agtggatatg atggaaagag gaaagattgg attagacttt
     1021 tgcaaatact tggtgttaga tgaagctgat cggatgttgg atatggggtt tgagcctcag
     1081 attcgtagaa tagtcgaaca agatactatg cctccaaagg gtgtccgcca cactatgatg
     1141 tttagtgcta cttttcctaa ggaaatacag atgctggctc gtgatttctt agatgaatat
     1201 atcttcttgg ctgtaggaag agttggctct acctctgaaa acatcacaca gaaagtagtt
     1261 tgggtggaag aatcagacaa acggtcattt ctgcttgacc tcctaaatgc aacaggcaag
     1321 gattcactga ccttagtgtt tgtggagacc aaaaagggtg cagattctct ggaggatttc
     1381 ttataccatg aaggatacgc atgtaccagc atccatggag accgttctca gagggataga
     1441 gaagaggccc ttcaccagtt ccgctcagga aaaagcccaa ttttagtggc tacagcagta
     1501 gcagcaagag gactggacat ttcaaatgtg aaacatgtta tcaattttga cttgccaagt
     1561 gatattgaag aatatgtaca tcgtattggt cgtacgggac gtgtaggaaa ccttggcctg
     1621 gcaacctcat tctttaacga gaggaacata aatattacta aggatttgtt ggatcttctt
     1681 gttgaagcta aacaagaagt gccgtcttgg ttagaaaaca tggcttatga acaccactac
     1741 aagggtagca gtcgtggacg ttctaagagt agcagattta gtggagggtt tggtgccaga
     1801 gactaccgac aaagtagcgg tgccagcagt tccagcttca gcagcagccg cgcaagcagc
     1861 agccgcagtg gcggaggtgg ccacggtagc agcagaggat ttggtggagg tggctatgga
     1921 ggcttttaca acagtgatgg atatggagga aattataact cccagggggt tgactggtgg
     1981 ggtaac
//