LOCUS AB371586 8443 bp mRNA linear HUM 24-AUG-2011
DEFINITION Homo sapiens SPTBN1 mRNA for spectrin beta non-erythrocytic 1,
complete cds, clone: HP07744-ARiS088A21.
ACCESSION AB371586
VERSION AB371586.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 8443)
AUTHORS Kato,S.
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Seishi Kato
National Rehabilitation Center for Persons with Disabilities,
Research Institute, Department of Rehabilitation Engineering; 4-1
Namiki, Tokorozawa, Saitama 359-8555, Japan
REFERENCE 2
AUTHORS Oshikawa,M., Sugai,Y., Usami,R., Ohtoko,K., Toyama,S. and Kato,S.
TITLE Fine Expression Profiling of Full-length Transcripts using a
Size-unbiased cDNA Library Prepared with the Vector-capping Method
JOURNAL DNA Res. 15, 123-136 (2008)
COMMENT For cDNA clones and library availability, please contact
RIKEN BioResource Center.
E-mail: dnabank@brc.riken.jp
URL:http://dna.brc.riken.jp/
FEATURES Location/Qualifiers
source 1..8443
/cell_line="ARPE-19"
/cell_type="retinal pigment epithelium"
/clone="HP07744-ARiS088A21"
/clone_lib="pGCAP10/ARPE-19 cDNA"
/db_xref="H-InvDB:HIT000487003"
/db_xref="taxon:9606"
/mol_type="mRNA"
/organism="Homo sapiens"
CDS 240..7334
/codon_start=1
/gene="SPTBN1"
/product="spectrin beta non-erythrocytic 1"
/protein_id="BAG48315.1"
/transl_table=1
/translation="MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSR
IKALADEREAVQKKTFTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPK
PTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQ
DISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPD
LIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHY
FSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSL
VGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDI
NKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNF
GFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVARELEAENYHDIKRITARKDNVIR
LWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLVLSQDYGKHLLGVEDL
LQKHTLVEADIGIQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRVAHMEFCYQELC
QLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKILSSDDYGKDLTSVMRLLSKHRA
FEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIIYIREQWANLEQLSAIRKKRL
EEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQSLVKKHKDVAEEIANYRP
TLDTLHEQASALPQEHAESPDVRGRLSGIEERYKEVAELTRLRKQALQDTLALYKMFS
EADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQ
LMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYHLECNETKSWIR
EKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKLESEHPDQA
QAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSRTQTAIASE
DMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQA
LDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGA
EAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKNRE
TASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFD
ANKAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEI
EELQSQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDV
EDEILWVGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIV
TDSSSLSAEAIRQRLADLKQLWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSE
QELYMMSEEKAKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESER
ISMRQSKVDKLYAGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHEL
GQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEWKDGLN
EAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETL
QRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDAC
ESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKA
EIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLI
LEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHEAFEKSAATWDERFS
ALERLTTLELLEVRRQQEEEERKRRPPSPEPSTKVSEEAESQQQWDTSKGEQVSQNGL
PAEQGSPRMAETVDTSEMVNGATEQRTSSKESSPIPSPTSDRKAKTALPAQSAATLPA
RTQETPSAQMEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKTAASGIP
YHSEVPVSLKEAVCEVALDYKKKKHVFKLRLNDGNEYLFQAKDDEEMNTWIQAISSAI
SSDKHEVSASTQSTPASSRAQTLPTSVVTITSESSPGKREKDKEKDKEKRFSLFGKKK
"
BASE COUNT 2380 a 2100 c 2303 g 1660 t
ORIGIN
1 agtccctccc tcggccgcct ctcctcccgg agcgagcgcg cagccctgcg cagcagcgcc
61 cactggtccc gtcctgtgag ccccggcccc agccgcggac agacccgcgg agtcgcctcc
121 cggcccaccc gcccggccgc cgaggagcgg gaggaggacg ggaccccggc gcccccaccc
181 catccccggg agaactctaa gaaggagctg atgtggagga gcagctgaga cagttcaaga
241 tgacgaccac agtagccaca gactatgaca acattgagat ccagcagcag tacagtgatg
301 tcaacaaccg ctgggatgtc gacgactggg acaatgagaa cagctctgcg cggctttttg
361 agcggtcccg catcaaggct ctggcagatg agcgtgaagc cgtgcagaag aagaccttca
421 ccaagtgggt caattcccac cttgcccgtg tgtcctgccg gatcacagac ctgtacactg
481 accttcgaga tggacggatg ctcatcaagc tgctggaggt cctctctgga gagaggctgc
541 ctaaacccac caagggacga atgcgcatcc actgcttaga gaatgtggac aaggcccttc
601 agttcctgaa ggagcagaga gtccatcttg agaacatggg gtcccatgac atcgtggatg
661 gaaaccaccg gctgaccctt ggcctcatct ggaccatcat cctgcgcttc cagatccagg
721 atatcagtgt ggaaactgaa gacaacaaag agaagaaatc tgccaaggat gcattgctgt
781 tgtggtgcca gatgaagaca gctgggtacc ccaatgtcaa cattcacaat ttcaccacta
841 gctggaggga cggcatggcc ttcaatgcac tgatacacaa acaccggcct gacctgatag
901 attttgacaa actaaagaaa tctaacgcac actacaacct gcagaatgca tttaatctgg
961 cagaacagca cctcggcctc actaaactgt tggaccccga agacatcagc gtggaccatc
1021 ctgatgagaa gtccataatc acttatgtgg tgacttatta ccactacttc tctaagatga
1081 aggccttagc tgttgaagga aaacgaattg gaaaggtgct tgacaatgct attgaaacag
1141 aaaaaatgat tgaaaagtat gaatcacttg cctctgacct tctggaatgg attgaacaaa
1201 ccatcatcat tctgaacaat cgcaaatttg ccaattcact ggtcggggtt caacagcagc
1261 ttcaggcatt caacacttac cgcactgtgg agaaaccacc caaatttact gagaagggga
1321 acttggaagt gctgctcttc accattcaga gcaagatgag ggccaacaac cagaaggtct
1381 acatgccccg ggaggggaag ctcatctctg acatcaacaa ggcctgggaa agactggaaa
1441 aagcggaaca cgaaagagaa ctggctttgc ggaatgagct cataagacag gagaaactgg
1501 aacagctcgc ccgcagattt gatcgcaagg cagctatgag ggagacttgg ctgagcgaaa
1561 accagcgtct ggtgtctcag gacaactttg ggtttgacct tcctgcagtt gaggccgcca
1621 caaaaaagca cgaggccatt gagacagaca ttgccgcata cgaggagcgt gtgcaggctg
1681 tggtagccgt ggccagggag ctcgaggccg agaattacca cgacatcaag cgcatcacag
1741 cgaggaagga caatgtcatc cggctctggg aatacctact ggaactgctc agggcccgga
1801 gacagcggct cgagatgaac ctggggctgc agaagatatt ccaggaaatg ctctacatta
1861 tggactggat ggatgaaatg aaggtgctag tattgtctca agactatggc aaacacttac
1921 ttggtgtgga agacctgtta cagaagcaca ccctggttga agcagacatt ggcatccagg
1981 cagagcgggt gagaggtgtc aatgcctccg cccagaagtt cgcaacagac ggggaaggtt
2041 acaagccctg tgacccccag gtgatccgag accgcgtggc ccacatggag ttctgttatc
2101 aagagctttg ccagctggcg gctgagcgca gggcccgtct ggaagagtcc cgccgcctct
2161 ggaagttctt ctgggagatg gcagaagagg aaggctggat acgggagaag gagaagatcc
2221 tgtcctcgga cgattacggg aaagacctga ccagcgtcat gcgcctgctc agcaagcacc
2281 gggcgttcga ggacgagatg agcggccgca gtggccactt tgagcaggcc atcaaggaag
2341 gcgaagacat gatcgcggag gagcacttcg ggtcggagaa gatccgtgag aggatcattt
2401 acatccggga gcagtgggcc aacctagagc agctctcggc cattcggaag aagcgcctgg
2461 aggaggcctc cctgctgcac cagttccagg cagatgctga tgacattgat gcctggatgc
2521 tggacatcct caagattgtc tccagcagcg acgtgggcca cgatgagtat tccacacagt
2581 ctctggtcaa gaaacacaag gacgtggcgg aagagatcgc caattacagg cccacccttg
2641 acacgctgca cgaacaagcc agcgccctcc cccaggagca tgccgagtct ccagacgtga
2701 ggggcaggct gtcgggcatc gaggagcggt ataaggaggt ggcagagctg acgcggctgc
2761 ggaagcaggc actccaggac actctggccc tgtacaagat gttcagcgag gctgatgcct
2821 gtgagctctg gatcgacgag aaggagcagt ggctcaacaa catgcagatc ccagagaagc
2881 tggaggatct ggaggtcatc cagcacagat ttgagagcct agaaccagaa atgaacaacc
2941 aggcttcccg ggttgcagtg gtgaaccaga ttgcacgcca gctgatgcac agcggccacc
3001 caagtgagaa ggaaatcaaa gcccagcagg acaaactcaa cacaaggtgg agccagttca
3061 gagaactggt tgacaggaag aaggatgccc tcctgtctgc cctgagcatc cagaactacc
3121 acctcgagtg caatgaaacc aaatcctgga ttcgggaaaa gaccaaggtc atcgagtcca
3181 cccaggacct gggcaatgac ctggctggcg tcatggccct gcagcgcaag ctgaccggca
3241 tggagcggga cttggtggcc attgaggcaa agctgagtga cctgcagaag gaggcggaga
3301 agctggagtc cgagcacccc gaccaggccc aggccatcct gtctcggctg gccgagatca
3361 gcgacgtgtg ggaggagatg aagaccaccc tgaaaaaccg agaggcctcc ctgggagagg
3421 ccagcaagct gcagcagttc ctacgggact tggacgactt ccagtcctgg ctctctagga
3481 cccagacagc gatcgcctcg gaggacatgc caaacaccct gaccgaggct gagaagctgc
3541 tcacgcagca cgagaacatc aagaacgaga tcgacaacta cgaggaggac taccagaaga
3601 tgagggacat gggcgagatg gtcacccagg ggcagaccga tgcccagtac atgtttctgc
3661 ggcagcggct gcaggccctg gacactggat ggaacgagct ccacaagatg tgggagaaca
3721 gacaaaatct cctatcccag tcacatgcct accagcagtt cctcagagac acgaagcaag
3781 ccgaagcctt tcttaacaac caggagtatg ttctggctca cactgaaatg cctaccacct
3841 tggaaggagc tgaagcagca attaaaaagc aagaggactt catgaccacc atggacgcca
3901 atgaggagaa gatcaatgct gtggtggaga ctggccggag gctggtgagc gatgggaaca
3961 tcaactcaga tcgcatccag gagaaggtgg actctattga tgacagacat aggaagaatc
4021 gtgagacagc cagtgaactt ttgatgaggt tgaaggacaa cagggatcta cagaaattcc
4081 tgcaagattg tcaagagctg tctctctgga tcaatgagaa gatgctcaca gcccaggaca
4141 tgtcttacga tgaagccaga aatctgcaca gtaaatggtt gaagcatcaa gcatttatgg
4201 cagaacttgc atccaacaaa gaatggcttg acaaaatcga gaaggaagga atgcagctca
4261 tttcagaaaa gcctgagacg gaagctgtgg tgaaggagaa actcactggt ttacataaaa
4321 tgtgggaagt ccttgaatcc actacccaga caaaggccca gcggctcttt gatgcaaaca
4381 aggccgaact tttcacccag agctgtgcag atctagacaa atggctgcac ggcctggaga
4441 gtcagattca gtctgatgac tatggcaaag acctgaccag tgtcaatatc ctgctgaaaa
4501 agcaacagat gctggagaat cagatggaag tgcggaagaa ggagatcgaa gagctccaaa
4561 gccaagccca ggccctgagt caggaaggga agagcaccga cgaggtagac agcaagcgcc
4621 tcaccgtgca gaccaagttc atggagttgc tggagccctt gaacgagagg aagcataacc
4681 tgctggcctc caaagagatc catcagttca acagggatgt ggaggacgag atcttgtggg
4741 ttggagagag gatgcctttg gcaacttcca cggatcatgg ccacaacctc cagactgtgc
4801 agctgttaat aaagaaaaat cagaccctcc agaaagaaat ccaggggcac cagcctcgca
4861 ttgacgacat ctttgagagg agccaaaaca tcgtcactga cagcagcagc ctcagcgctg
4921 aggccatcag acagaggctt gccgacctga agcagctgtg gggtctcctc attgaggaga
4981 cagagaaacg ccacaggcgg ctggaggagg cgcacagggc ccagcagtac tactttgacg
5041 ctgctgaggc cgaagcctgg atgagcgagc aggagctgta catgatgtca gaggagaagg
5101 ccaaggatga gcagagtgct gtctccatgt tgaagaagca ccagatctta gaacaagctg
5161 tggaggacta tgcagagacc gtgcatcagc tctccaagac cagccgggcc ctggtggccg
5221 acagccatcc tgaaagtgag cgcattagca tgcggcagtc caaagtggat aaactgtacg
5281 ctggtctgaa agaccttgct gaagagagaa gaggcaagct ggatgagaga cacaggttat
5341 tccagctcaa ccgggaggtg gacgacctgg agcagtggat cgctgagagg gaggtggtcg
5401 cagggtccca tgaactggga caggactatg agcatgtcac gatgttacaa gaacgattcc
5461 gggagtttgc ccgagacacc gggaacattg ggcaggagcg cgtggacacg gtcaatcacc
5521 tggcagatga gctcatcaac tctggacatt cagatgccgc caccatcgct gaatggaagg
5581 atggcctcaa tgaagcctgg gccgacctcc tggagctcat tgacacaaga acacagattc
5641 ttgccgcttc ctatgaactg cacaagtttt accacgatgc caaggagatc tttgggcgta
5701 tacaggacaa acacaagaaa ctccctgagg agcttgggag agatcagaac acagtggaga
5761 ccttacagag aatgcacact acatttgagc atgacatcca ggctctgggc acacaggtga
5821 ggcagctgca ggaggatgca gcccgcctcc aggcggccta tgcgggtgac aaggccgacg
5881 atatccagaa gcgcgagaac gaggtcctgg aagcctggaa gtccctcctg gacgcctgtg
5941 agagccgcag ggtgcggctg gtggacacag gggacaagtt ccgcttcttc agcatggtgc
6001 gcgacctcat gctctggatg gaggatgtca tccggcagat cgaggcccag gagaagccaa
6061 gggatgtatc atctgttgaa ctcttaatga ataatcatca aggcatcaaa gctgaaattg
6121 atgcacgtaa tgacagtttc acaacctgca ttgaacttgg gaaatccctg ttggcgagaa
6181 aacactatgc atctgaggag atcaaggaaa aattactgca gttgacggaa aagaggaaag
6241 aaatgatcga caagtgggaa gaccgatggg aatggttaag actgattctg gaggtccatc
6301 agttctcaag agacgccagt gtggccgagg cctggctgct tggacaggag ccgtacctat
6361 ccagccgaga gataggccag agcgtggacg aggtggagaa gctcatcaag cgccacgagg
6421 catttgaaaa gtctgcagca acctgggatg agaggttctc tgccctggaa aggctgacta
6481 cattggagtt actggaagtg cgcagacagc aagaggaaga ggagaggaag aggcggccac
6541 cttctcccga gccgagcacg aaggtttcag aggaagccga gtcccagcag cagtgggata
6601 cttcaaaagg agaacaagtt tcccaaaacg gtttgccagc tgaacaggga tctccacgga
6661 tggcagaaac ggtggacaca agcgaaatgg tcaacggcgc tacagaacaa aggacgagct
6721 ctaaagagtc cagccccatc ccctccccga cctctgatcg taaagccaag actgccctcc
6781 cagcccagag tgccgccacc ttaccagcca gaacccagga gacaccttcg gcccagatgg
6841 aaggcttcct caatcggaaa cacgagtggg aggcccacaa taagaaagcc tcaagcaggt
6901 cctggcacaa tgtttattgt gtcataaata accaagaaat gggtttctac aaagatgcaa
6961 agactgctgc ttctggaatt ccctaccaca gcgaggtccc tgtgagtttg aaagaagctg
7021 tctgcgaagt ggcccttgat tacaaaaaga agaaacacgt attcaagcta agactaaatg
7081 atggcaatga gtacctcttc caagccaaag acgatgagga aatgaacaca tggatccagg
7141 ctatctcttc cgccatctcc tctgataaac acgaggtgtc tgccagcacc cagagcacgc
7201 cagcatccag ccgcgcgcag accctcccca ccagcgtcgt caccatcacc agcgagtcca
7261 gtcccggcaa gcgggaaaag gacaaagaga aagacaaaga gaagcggttc agcctttttg
7321 gcaaaaagaa atgaactcct ttccttcacc tcctgccctt ctcttacctt ttcagtgaaa
7381 ttccagcatg caagctcaga accaacacat tactctctgt gcctaatgtt cctcaatgtg
7441 gttgattttt tttttttttt aatttataga gcatttcggg gggggtgggg gaaacacacc
7501 taaacacttt atctccaagt tacaaaagtt tgaggtgcag agggaaggcc agattttttt
7561 tttaatgaaa ttatatagat tagatctcag tatttaaact gttcctcaat tttgtgaggc
7621 tgtgttggaa ataacccgcc tctagtgctg ttggtatgca aggcagcggt gcttaatcaa
7681 tatttcctgt gctcaccaga ggcaaaatgt accaatatcc tgacaccatt ctctctccat
7741 ttacttctgg tggttaccct gactcttgac tcttagaagt gcccgagatg gggctaacct
7801 ttattaaaca gatcgcatat tatgatcttg ctgcagccac agtgcagctc cacattaact
7861 ctacagacca aaccatttgt atctggcatc acttactaac acacgacatg cggcttttct
7921 gcatcaactg ctatgacggt taagaatgtc agtatacaag aaggaataga aaactgatac
7981 tgttttaaat aatctgtaat ttcaattttt tttttttttt tgctgaaata cattatattg
8041 tacgtttgag ataattctag tacaaagtat aataaaacta gatgtataat aaacccttta
8101 aatcattggt aagtgtacaa gtggtggaac tgaagcattt actggacaaa gtaatgttac
8161 tctaatggtt acttgctcgt gcgttgccac actgtgttat aatttgcttc atttccttgc
8221 tatttgatac atagtgtgca tttctctgtc actgtaacta ttgtaatgac aaattttcat
8281 cttactgcac aatcaaaatg acattgatag gaatgaactc cagaggctgg gcctgaacag
8341 ggaggtggtc gctcaggcct ggtgctcagt cgtacgacct gtacctctca acttttgccc
8401 tatctgttaa atatatgcta tgtcattaaa tgcttttaaa tct
//