LOCUS       AB300418                7564 bp    mRNA    linear   HUM 27-MAR-2008
DEFINITION  Homo sapiens N-TAF1 mRNA for TAF1 RNA polymerase II, TATA box
            binding protein (TBP)-associated factor, neuron specific isoform,
            complete cds.
ACCESSION   AB300418
VERSION     AB300418.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 7564)
  AUTHORS   Makino,S. and Tamiya,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2007) to the DDBJ/EMBL/GenBank databases.
            Contact:Satoshi Makino
            The University of Tokushima Graduate School of Medicine,
            Department of Neurology and Neuroscience; 3-18-15, Kuramoto-cho,
            Tokushima City, Tokushima 770-8503, Japan
REFERENCE   2
  AUTHORS   Makino,S. and Tamiya,G.
  TITLE     A neuron-specific isoform of TAF1
  JOURNAL   Unpublished (2007)
REFERENCE   3
  AUTHORS   Makino,S., Kaji,R., Ando,S., Tomizawa,M., Yasuno,K., Goto,S.,
            Matsumoto,S., Tabuena,M.D., Maranon,E., Dantes,M., Lee,L.V.,
            Ogasawara,K., Tooyama,I., Akatsu,H., Nishimura,M. and Tamiya,G.
  TITLE     Reduced neuron-specific expression of the TAF1 gene is associated
            with X-linked dystonia-parkinsonism.
  JOURNAL   Am. J. Hum. Genet. 80, 393-406 (2007)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..7564
                     /chromosome="X"
                     /db_xref="H-InvDB:HIT000409138"
                     /db_xref="taxon:9606"
                     /map="Xq13.1"
                     /mol_type="mRNA"
                     /organism="Homo sapiens"
                     /tissue_type="brain"
     CDS             4..5691
                     /codon_start=1
                     /gene="N-TAF1"
                     /note="complete translation frame of TAF1 with an
                     insertion of two amino acid residues, alanine and lysine"
                     /product="TAF1 RNA polymerase II, TATA box binding
                     protein (TBP)-associated factor, neuron specific isoform"
                     /protein_id="BAG15901.1"
                     /transl_table=1
                     /translation="MGPGCDLLLRTAATITAAAIMSDTDSDEDSAGGGPFSLAGFLFG
                     NINGAGQLEGESVLDDECKKHLAGLGALGLGSLITELTANEELTGTDGALVNDEGWVR
                     STEDAVDYSDINEVAEDESRRYQQTMGSLQPLCHSDYDEDDYDADCEDIDCKLMPPPP
                     PPPGPMKKDKDQDSITGVSENGEGIILPSIIAPSSLASEKVDFSSSSDSESEMGPQEA
                     TQAESEDGKLTLPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVW
                     RSARRKRKKKHRELIQEEQIQEVECSVESEVSQKSLWNYDYAPPPPPEQCLSDDEITM
                     MAPVESKFSQSTGDIDKVTDTKPRVAEWRYGPARLWYDMLGVPEDGSGFDYGFKLRKT
                     EHEPVIKSRMIEEFRKLEENNGTDLLADENFLMVTQLHWEDDIIWDGEDVKHKGTKPQ
                     RASLAGWLPSSMTRNAMAYNVQQGFAATLDDDKPWYSIFPIDNEDLVYGRWEDNIIWD
                     AQAMPRLLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSRILLGKT
                     GVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQQGLRGTFGGNIIQHSIPAVELRQPFF
                     PTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGGE
                     MFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKY
                     GETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELV
                     DIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFP
                     SHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA
                     AEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVT
                     GVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRK
                     FGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQ
                     RIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQE
                     RKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYVRCE
                     TVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKE
                     KLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQ
                     EEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRR
                     VGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVK
                     DYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSM
                     LDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHP
                     VNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQY
                     TKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQAK
                     PPDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQEGEDGDGDLADEEEGT
                     VQQPQASVLYEDLLMSEGEDDEEDAGSDEEGDNPFSAIQLSESGSDSDVGSGGIRPKQ
                     PRMLQENTRMDMENEESMMSYEGDGGEASHGLEDSNISYGSYEEPDPKSNTQDTSFSS
                     IGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE"
     misc_feature    5002..5007
                     /note="Additional exon, 5'-GCTAAG-3'"
BASE COUNT         2244 a         1553 c         1889 g         1878 t
ORIGIN      
        1 tctatgggac ccggctgcga tttgctgctg cggacagcag ctaccatcac tgctgccgcc
       61 atcatgtcag acacggacag cgacgaagat tccgctggag gcggcccatt ttctttagcg
      121 ggtttccttt tcggcaacat caatggagcc gggcagctgg agggggaaag cgtcttggat
      181 gatgaatgta agaagcactt ggcaggcttg ggggctttgg ggctgggcag cctgatcact
      241 gaactcacgg caaatgaaga attgaccggg actgacggtg ccttggtaaa tgatgaaggg
      301 tgggttagga gtacagaaga tgctgtggac tattcagaca tcaatgaggt ggcagaagat
      361 gaaagccgaa gataccagca gacgatgggg agcttgcagc ccctttgcca ctcagattat
      421 gatgaagatg actatgatgc tgattgtgaa gacattgatt gcaagttgat gcctcctcca
      481 cctccacccc cgggaccaat gaagaaggat aaggaccagg attctattac tggtgtgtct
      541 gaaaatggag aaggcatcat cttgccctcc atcattgccc cttcctcttt ggcctcagag
      601 aaagtggact tcagtagttc ctctgactca gaatctgaga tgggacctca ggaagcaaca
      661 caggcagaat ctgaagatgg aaagctgacc cttccattgg ctgggattat gcagcatgat
      721 gccaccaagc tgttgccaag tgtcacagaa ctttttccag aatttcgacc tggaaaggtg
      781 ttacgttttc tacgtctttt tggaccaggg aagaatgtcc catctgtttg gcggagtgct
      841 cggagaaaga ggaagaagaa gcaccgtgag ctgatacagg aagagcagat ccaggaggtg
      901 gagtgctcag tagaatcaga agtcagccag aagtctttgt ggaactacga ctacgctcca
      961 ccaccacctc cagagcagtg tctctctgat gatgaaatca cgatgatggc tcctgtggag
     1021 tccaaatttt cccaatcaac tggagatata gataaagtga cagataccaa accaagagtg
     1081 gctgagtggc gttatgggcc tgcccgactg tggtatgata tgctgggtgt ccctgaagat
     1141 ggcagtgggt ttgactatgg cttcaaactg agaaagacag aacatgaacc tgtgataaaa
     1201 tctagaatga tagaggaatt taggaaactt gaggaaaaca atggcactga tcttctggct
     1261 gatgaaaact tcctgatggt gacacagctg cattgggagg atgatatcat ctgggatggg
     1321 gaggatgtca aacacaaagg gacaaaacct cagcgtgcaa gcctggcagg ctggcttcct
     1381 tctagcatga ctaggaatgc gatggcttac aatgttcagc aaggttttgc agccactctt
     1441 gatgatgaca aaccttggta ctccattttt cccattgaca atgaggatct ggtatatgga
     1501 cgctgggagg acaatatcat ttgggatgct caggccatgc cccggctgtt ggaacctcct
     1561 gttttgacac ttgatcccaa tgatgagaac ctcattttgg aaattcctga tgagaaggaa
     1621 gaggccacct ctaactcccc ctccaaggag agtaagaagg aatcatctct gaagaagagt
     1681 cgaattctct tagggaaaac aggagtcatc aaggaggaac cacagcagaa catgtctcag
     1741 ccagaagtga aagatccatg gaatctctcc aatgatgagt attattatcc caagcaacag
     1801 ggtcttcgag gcacctttgg agggaatatt atccagcatt caattcctgc tgtggaatta
     1861 cggcagccct tctttcccac ccacatgggg cccatcaaac tccggcagtt ccatcgccca
     1921 cctctgaaaa agtactcatt tggtgcactt tctcagccag gtccccactc agtccaacct
     1981 ttgctaaagc acatcaaaaa aaaggccaag atgagagaac aagagaggca agcttcaggt
     2041 ggtggagaga tgttttttat gcgcacacct caggacctca caggcaaaga tggtgatctt
     2101 attcttgcag aatatagtga ggaaaatgga cccttaatga tgcaggttgg catggcaacc
     2161 aagataaaga actattataa acggaaacct ggaaaagatc ctggagcacc agattgtaaa
     2221 tatggggaaa ctgtttactg ccatacatct cctttcctgg gttctctcca tcctggccaa
     2281 ttgctgcaag catttgagaa caaccttttt cgtgctccaa tttatcttca taagatgcca
     2341 gaaactgatt tcttgatcat tcggacaaga cagggttact atattcggga attagtggat
     2401 atttttgtgg ttggccagca gtgtcccttg tttgaagttc ctgggcctaa ctccaaaagg
     2461 gccaatacgc atattcgaga ctttctacag gtttttattt accgcctttt ctggaaaagt
     2521 aaagatcggc cacggaggat acgaatggaa gatataaaaa aagcctttcc ttcccattca
     2581 gaaagcagca tccggaagag gctaaagctc tgcgctgact tcaaacgcac agggatggac
     2641 tcaaactggt gggtgcttaa gtctgatttt cgtttaccaa cggaagaaga gatcagagct
     2701 atggtgtcac cagagcagtg ctgtgcttat tatagcatga tagctgcaga gcaacgactg
     2761 aaggatgctg gctatggtga gaaatccttt tttgctccag aagaagaaaa tgaggaagat
     2821 ttccagatga agattgatga tgaagttcgc actgcccctt ggaacaccac aagggccttc
     2881 attgctgcca tgaagggcaa gtgtctgcta gaggtgactg gggtggcaga tcccacgggg
     2941 tgtggtgaag gattctccta tgtgaagatt ccaaacaaac caacacagca gaaggatgat
     3001 aaagaaccgc agccagtgaa gaagacagtg acaggaacag atgcagacct tcgtcgcctt
     3061 tccctgaaaa atgccaagca acttctacgt aaatttggtg tgcctgagga agagattaaa
     3121 aagttgtccc gctgggaagt gattgatgtg gtgcgcacaa tgtcaacaga acaggctcgt
     3181 tctggagagg ggcccatgag taaatttgcc cgtggatcaa ggttttctgt ggctgagcat
     3241 caagagcgtt acaaagagga atgtcagcgc atctttgacc tacagaacaa ggttctgtca
     3301 tcaactgaag tcttatcaac tgacacagac agcagctcag ctgaagatag tgactttgaa
     3361 gaaatgggaa agaacattga gaacatgttg cagaacaaga aaaccagctc tcagctttca
     3421 cgtgaacggg aggaacagga gcggaaggaa ctacagcgaa tgctactggc agcaggctca
     3481 gcagcatccg gaaacaatca cagagatgat gacacagctt ccgtgactag ccttaactct
     3541 tctgccactg gacgctgtct caagatttat cgcacgtttc gagatgaaga ggggaaagag
     3601 tatgttcgct gtgagacagt ccgaaaacca gctgtcattg atgcctatgt gcgcatacgg
     3661 actacaaaag atgaggaatt cattcgaaaa tttgcccttt ttgatgaaca acatcgggaa
     3721 gagatgcgaa aagaacggcg gaggattcaa gagcaactga ggcggcttaa gaggaaccag
     3781 gaaaaggaga agcttaaggg tcctcctgag aagaagccca agaaaatgaa ggagcgtcct
     3841 gacctaaaac tgaaatgtgg ggcatgtggt gccattggac acatgaggac taacaaattc
     3901 tgccccctct attatcaaac aaatgcgcca ccttccaacc ctgttgccat gacagaagaa
     3961 caggaggagg agttggaaaa gacagtcatt cataatgata atgaagaact tatcaaggtt
     4021 gaagggacca aaattgtctt ggggaaacag ctaattgaga gtgcggatga ggttcgcaga
     4081 aaatctctgg ttctcaagtt tcctaaacag cagcttcctc caaagaagaa acggcgagtt
     4141 ggaaccactg ttcactgtga ctatttgaat agacctcata agtccatcca ccggcgccgc
     4201 acagacccta tggtgacgct gtcgtccatc ttggagtcta tcatcaatga catgagagat
     4261 cttccaaata catacccttt ccacactcca gtcaatgcaa aggttgtaaa ggactactac
     4321 aaaatcatca ctcggccaat ggacctacaa acactccgcg aaaacgtgcg taaacgcctc
     4381 tacccatctc gggaagagtt cagagagcat ctggagctaa ttgtgaaaaa tagtgcaacc
     4441 tacaatgggc caaaacactc attgactcag atctctcaat ccatgctgga tctctgtgat
     4501 gaaaaactca aagagaaaga agacaaatta gctcgcttag agaaagctat caaccccttg
     4561 ctggatgatg atgaccaagt ggcgttttct ttcattctgg acaacattgt cacccagaaa
     4621 atgatggcag ttccagattc ttggccattt catcacccag ttaataagaa atttgttcca
     4681 gattattaca aagtgattgt caatccaatg gatttagaga ccatacgtaa gaacatctcc
     4741 aagcacaagt atcagagtcg ggagagcttt ctggatgatg taaaccttat tctggccaac
     4801 agtgttaagt ataatggacc tgagagtcag tatactaaga ctgcccagga gattgtgaac
     4861 gtctgttacc agacattgac tgagtatgat gaacatttga ctcaacttga gaaggatatt
     4921 tgtactgcta aagaagcagc tttggaggaa gcagaattag aaagcctgga cccaatgacc
     4981 ccagggccct acacgcctca ggctaagcct cctgatttgt atgataccaa cacatccctc
     5041 agtatgtctc gagatgcctc tgtatttcaa gatgagagca atatgtctgt cttggatatt
     5101 cccagtgcca ctccagaaaa gcaggtaaca caggaaggtg aagatggaga tggtgatctt
     5161 gcagatgaag aggaaggaac tgtacaacag cctcaagcca gtgtcctgta tgaggatttg
     5221 cttatgtctg aaggagaaga tgatgaggaa gatgctggga gtgatgaaga aggagacaat
     5281 cctttctctg ctatccagct gagtgaaagt ggaagtgact ctgatgtggg atctggtgga
     5341 ataagaccca aacaaccccg catgcttcag gagaacacaa ggatggacat ggaaaatgaa
     5401 gaaagcatga tgtcctatga gggagacggt ggggaggctt cccatggttt ggaggatagc
     5461 aacatcagtt atgggagcta tgaggagcct gatcccaagt cgaacaccca agacacaagc
     5521 ttcagcagca tcggtgggta tgaggtatca gaggaggaag aagatgagga ggaggaagag
     5581 cagcgctctg ggccgagcgt actaagccag gtccacctgt cagaggacga ggaggacagt
     5641 gaggatttcc actccattgc tggggacagt gacttggact ctgatgaatg aggcttcctt
     5701 tgggcctcct tggtcagcct tccctgttct ccagcctagg tggttcacct ttccccaatt
     5761 tgttcatatt tgtacagtat ctgatcctga aatcatgaaa ttaactaaca ccttagcctt
     5821 tttaaaagta gtaagtaaat gataataaat cacctctcct aatcttcctg gggcaatgtc
     5881 accctttgat ttaaaacaaa gcaaccccct ttcccctacc actacggaaa agagcaagct
     5941 catttttccg tgtcctcctt tatttaactc catttattgc ttttggtata atttttccct
     6001 ggggaaggag gggaaattat gaaagaacta gtaactttat gtcctcttga tgtattagga
     6061 aatttccggc caggcgtggt ggctcacacc tgtaatctca gcactctggg aggccgaggc
     6121 gggcagatca cctgaggtca gaagttcgag accagcttgg ccaacatggc gaaaccgcat
     6181 ctctactaaa aatacaaaaa ttagccaggt gtggtggcgt atgcctgtta atcctagcta
     6241 ctcgggaggc tgaggcagga gaattacttg aacccgggag gcagaggttg cagtgagtgg
     6301 aggtcacgcc actgcactcc agcctgggcg aaagagtgag attcagtctc aaaaaaaaaa
     6361 aaatttccaa gcatggtatc atctcacttt tctaatttac aggctggagc agatgagagc
     6421 cctcctgctg ggacagagaa ttgggttcta gtggactctg tgctacactt aaacctgtga
     6481 gacaaaccgc ccattatttt attatttaat tatgcaatgc ctagttccta aatggattgg
     6541 aggcaaatta ccgtaaattt tgaaacagcc tatatgtcag aaatgataat gttgccacct
     6601 aaatgttttc tgtccccccc accctcccca ggggaaatgg taggaaaatg gtaagtttct
     6661 tagggcaaag actgtgtctt ctgtttcttt tcatgcttag gatatggttc tgtgcatagt
     6721 aggtactcag taaatgttcc tagaatcata aaatcctcaa cagatatgtt actgagcatc
     6781 tgcttttcat gataagcact ctatcagatc cttgggatgc aaaggtaaat aagacaaatc
     6841 ccttttaccc aaagagctca ccatcaagtt gggggaggga aagtggaatt caaaacatgt
     6901 taataaatca tcatagtact gtgagataag tgcaattaag aagctagtta taaagtatag
     6961 gggaaataga ggagtaatca tgtctgaaaa gtcaggaaag tcttcctaga ggtaattttt
     7021 aagctgattg ttttagaatt agtagaagct tgccagatgg aaaagtccag gcaaagtgta
     7081 acatgaatgg gaaaggccac agtctagaaa tggcagagtg tgttcctagt ttgtttgttt
     7141 gtttgtttgt acctgccttg ttccaggaag gatttaatgt ggtttatatt ccagtccttt
     7201 aatgctggaa gggctgagat gagactgaaa gatgggcagg aagtatatca tcacaagctt
     7261 tgtgtttgat gttaatgtgt atgattttta tattatggga aataagctct tagaggagtg
     7321 atataatcag gtttgtgttt tagaaatctg tgtaatgaat gaatgaagaa agaaattgaa
     7381 gaatcatgta acatatgtga tcgcattttt gtaaaagaac catgtgtgtt tatatgtgtt
     7441 tatatatata cttgtgtatg caaaggtaaa agtctgaaag gatatatgct aactgttcac
     7501 aatgataacc ccccaggaat gggattggag gggagggggc ttctgtgttt gttatgtatg
     7561 ctgg
//