LOCUS AB290164 7043 bp mRNA linear HUM 02-FEB-2008
DEFINITION Homo sapiens mRNA for DNAH5/KIAA1603 variant protein, partial cds.
ACCESSION AB290164
VERSION AB290164.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7043)
AUTHORS Kikuno,R.F., Yamakawa,H., Nagase,T. and Ohara,O.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Hisashi Yamakawa
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
REFERENCE 2
AUTHORS Yamakawa,H., Kikuno,R.F., Nagase,T. and Ohara,O.
TITLE Multiplex amplification and cloning of 5'-ends of cDNA by
ligase-free recombination: Preparation of full-lemgth cDNA clones
encoding motor proteins
JOURNAL Unpublished (2007)
COMMENT
FEATURES Location/Qualifiers
source 1..7043
/clone="fj10308y2"
/db_xref="H-InvDB:HIT000409109"
/db_xref="taxon:9606"
/mol_type="mRNA"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1..5920
/codon_start=2
/note="Start codon is not identified"
/note="dynein, axonemal, heavy chain 5, DNAH5 variant"
/product="DNAH5 variant protein"
/protein_id="BAG06718.1"
/transl_table=1
/translation="TVFIDDVNMPIINEWGDQVTNEIVRQLMEQNGFYNLEKPGEFTS
IVDIQFLAAMIHPGGGRNDIPQRLKRQFSIFNCTLPSEASVDKIFGVIGVGHYCTQRG
FSEEVRDSVTKLVPLTRRLWQMTKIKMLPTPAKFHYVFNLRDLSRVWQGMLNTTSEVI
KEPNDLLKLWKHECKRVIADRFTVSSDVTWFDKALVSLVEEEFGEEKKLLVDCGIDTY
FVDFLRDAPEAAGETSEEADAETPKIYEPIESFSHLKERLNMFLQLYNESIRGAGMDM
VFFADAMVHLVKISRVIRTPQGNALLVGVGGSGKQSLTRLASFIAGYVSFQITLTRSY
NTSNLMEDLKVLYRTAGQQGKGITFIFTDNEIKDESFLEYMNNVLSSGEVSNLFARDE
IDEINSDLASVMKKEFPRCLPTNENLHDYFMSRVRQNLHIVLCFSPVGEKFRNRALKF
PALISGCTIDWFSRWPKDALVAVSEHFLTSYDIDCSLEIKKEVVQCMGSFQDGVAEKC
VDYFQRFRRSTHVTPKSYLSFIQGYKFIYGEKHVEVRTLANRMNTGLEKLKEASESVA
ALSKELEAKEKELQVANDKADMVLKEVTMKAQAAEKVKAEVQKVKDRAQAIVDSISKD
KAIAEEKLEAAKPALEEAEAALQTIRPSDIATVRTLGRPPHLIMRIMDCVLLLFQRKV
SAVKIDLEKSCTMPSWQESLKLMTAGNFLQNLQQFPKDTINEEVIEFLSPYFEMPDYN
IETAKRVCGNVAGLCSWTKAMASFFSINKEVLPLKANLVVQENRHLLAMQDLQKAQAE
LDDKQAELDVVQAEYEQAMTEKQTLLEDAERCRHKMQTASTLISGLAGEKERWTEQSQ
EFAAQTKRLVGDVLLATAFLSYSGPFNQEFRDLLLNDWRKEMKARKIPFGKNLNLSEM
LIDAPTISEWNLQGLPNDDLSIQNGIIVTKASRYPLLIDPQTQGKIWIKNKESRNELQ
ITSLNHKYFRNHLEDSLSLGRPLLIEDVGEELDPALDNVLERNFIKTGSTFKVKVGDK
EVDVLDGFRLYITTKLPNPAYTPEISARTSIIDFTVTMKGLEDQLLGRVILTEKQELE
KERTHLMEDVTANKRRMKELEDNLLYRLTSTQGSLVEDESLIVVLSNTKRTAEEVTQK
LEISAETEVQINSAREEYRPVATRGSILYFLITEMRLVNEMYQTSLRQFLGLFDLSLA
RSVKSPITSKRIANIIEHMTYEVYKYAARGLYEEHKFLFTLLLTLKIDIQRNRVKHEE
FLTLIKGGASLDLKACPPKPSKWILDITWLNLVELSKLRQFSDVLDQISRNEKMWKIW
FDKENPEEEPLPNAYDKSLDCFRRLLLIRSWCPDRTIAQARKYIVDSMGEKYAEGVIL
DLEKTWEESDPRTPLICLLSMGSDPTDSIIALGKRLKIETRYVSMGQGQEVHARKLLQ
QTMANGGWALLQNCHLGLDFMDELMDIIIETELVHDAFRLWMTTEVHKQFPITLLQMS
IKFANDPPQGLRAGLKRTYSGVSQDLLDVSSGSQWKPMLYAVAFLHSTVQERRKFGAL
GWNIPYEFNQADFNATVQFIQNHLDDMDVKKGVSWTTIRYMIGEIQYGGRVTDDYDKR
LLNTFAKVWFSENMFGPDFSFYQGYNIPKCSTVDNYLQYIQSLPAYDSPEVFGLHPNA
DITYQSKLAKDVLDTILGIQPKDTSGGGDETREAVVARLADDMLEKLPPDYVPFEVKE
RLQKMGPFQPMNIFLRQEIDRMQRVLSLVRSTLTELKLAIDGTIIMSENLRDALDCMF
DARIPAWWKKASWVSSTLGFWFTELIERNSQFTSWVFNGRPHCFWMTGFFNPQGFLTA
MRQEITRANKGWALDNMVLCNEVTKWMKDDISAPPTEGVYVYGLYLEGAGWDKRNMKL
IESKPKVLFELMPVIRIYAENNTLRDPRFYSCPIYKKPVRTDLNYIAAVDLRTAQTPE
HWVLRGVALLCDVK"
BASE COUNT 2109 a 1437 c 1659 g 1838 t
ORIGIN
1 gaccgttttt attgatgatg tgaatatgcc aataatcaat gagtggggag atcaggttac
61 gaatgagata gtgcgacagc tgatggaaca aaatggattc tataatctag agaagcctgg
121 ggagttcacc agcatcgtgg acatccagtt tttggcagcc atgatccatc ctggtggtgg
181 acgcaatgac ataccccaaa gactcaagag gcagttctct atatttaatt gcacgttgcc
241 ctctgaagct tctgtggaca agatctttgg tgtgattggg gtaggccact actgtactca
301 gaggggtttc tcagaagaag tgagagattc tgtgacaaaa ttggtgcctc tgacacgccg
361 actatggcag atgaccaaga ttaaaatgct tcctacccct gcaaaattcc attatgtgtt
421 taacctacga gatctttctc gggtctggca gggaatgctg aacactactt cagaggtcat
481 caaggaacca aatgatctgt taaagctgtg gaagcatgag tgtaaacgtg ttatagctga
541 ccgtttcaca gtgtccagtg atgtgacctg gtttgataag gctttagtaa gtttggtaga
601 ggaggagttt ggtgaagaga aaaaactctt ggtggattgt ggaattgaca catattttgt
661 ggatttcttg agagatgcac ctgaagctgc aggtgaaaca tctgaagagg ctgatgctga
721 aacacctaaa atttatgagc caattgaatc ttttagtcac ctaaaagagc gtctgaatat
781 gttcctgcag ctctataatg agagcatccg tggcgccggc atggacatgg tgttctttgc
841 agatgccatg gttcacttag tcaagatctc tcgtgtcatt cgtactcctc agggaaatgc
901 cctcctggtc ggggtgggcg gatcaggaaa gcagagcctg acgaggttgg cttcattcat
961 tgctggctac gtttccttcc agatcactct gacgagatcc tacaacacat caaatctgat
1021 ggaagatctg aaggttttgt atcgaacagc tggtcagcaa ggcaaaggaa tcacttttat
1081 tttcacagac aatgagatta aagatgagtc atttttggaa tatatgaaca atgttttatc
1141 atcaggtgag gtctctaacc tatttgctcg agatgaaatt gatgaaatta atagcgacct
1201 ggcatcagtc atgaaaaaag aattccccag gtgccttcct accaatgaga acctgcacga
1261 ctacttcatg agtcgggtcc gacagaacct tcatattgtg ctctgcttct cgccagtggg
1321 ggagaaattt cgaaacagag ctttgaagtt ccctgcccta atttcaggat gcacaattga
1381 ctggttcagc cgatggccca aagatgcttt agttgctgtg tctgaacact tcctcacttc
1441 ctatgatatt gactgcagtt tggaaatcaa gaaggaggtg gtccaatgca tgggctcctt
1501 ccaggatggg gtggctgaga agtgtgttga ttattttcag agattccgac gttctaccca
1561 cgtgacgccc aaatcatacc tctcctttat tcagggctat aagttcatat atggagaaaa
1621 gcatgtggag gtgcggaccc tggccaacag aatgaatact ggattggaaa agctcaaaga
1681 agcttcagag tctgttgcag ccttgagtaa agaactggaa gcgaaagaaa aggagctaca
1741 agtggccaac gataaagccg acatggtctt aaaagaagtg acaatgaaag cacaggctgc
1801 tgaaaaggtc aaggctgagg tacagaaggt gaaggacagg gcccaggcca ttgtggacag
1861 catctctaaa gacaaagcca ttgctgaaga aaaactggaa gcagcaaaac cagctttaga
1921 agaggcagaa gctgcattgc agaccatcag gccttcggac atcgccactg ttcgcacgtt
1981 gggccgcccc cctcacctca tcatgcggat catggattgc gtactgctgc tgtttcaaag
2041 gaaagtcagt gctgtgaaaa ttgacctgga aaaaagctgt accatgccct cctggcagga
2101 atccttaaaa ttgatgactg cagggaactt tttacagaac ttacagcaat tcccaaaaga
2161 cacaatcaat gaagaggtga tagaattttt gagtccttac tttgaaatgc ctgactataa
2221 catcgaaact gctaaacgcg tatgtggaaa tgtagctggt ctttgttcct ggacgaaagc
2281 tatggcttcc ttcttttcta taaacaaaga agtactgcct ctgaaggcca acttggtggt
2341 gcaagagaat cgccatctcc tggccatgca ggatctgcag aaagcccagg ccgagttgga
2401 tgacaagcag gcggaacttg acgtggtgca ggctgagtat gaacaggcca tgactgaaaa
2461 gcagaccttg cttgaagatg cagagcgatg cagacacaag atgcagacag cttccacgct
2521 catcagtggc ttggcaggtg aaaaagaaag atggacagag caaagccaag agtttgctgc
2581 acaaactaaa agacttgtag gggatgtact gttggctaca gcttttctat cttattctgg
2641 tccatttaac caagagtttc gtgatcttct gttaaatgac tggcggaagg aaatgaaagc
2701 ccggaaaatt ccatttggaa agaacctaaa tctcagtgag atgttgattg atgctcctac
2761 tattagtgaa tggaacctcc aaggtctgcc aaatgatgac ttgtccattc aaaatggaat
2821 tattgtcacg aaggcatctc gttacccttt gttaattgat ccacagactc aaggcaagat
2881 ctggattaaa aataaagaaa gccgaaatga actccagatc acgtctttaa atcacaagta
2941 cttcagaaac cacctggaag acagcctttc tcttggaagg cctttgctta ttgaagatgt
3001 tggagaggaa ctagatccag cactagataa tgttttggaa agaaacttca ttaaaactgg
3061 gtctaccttt aaggtgaaag ttggtgacaa ggaagtagat gtgttggatg gctttagact
3121 ctacattacc accaaattgc ctaacccagc ctacacccct gagataagtg cccgtacctc
3181 catcattgac ttcactgtca ccatgaaagg tctagaagat cagttactgg ggagggtcat
3241 tctcacagag aagcaggaat tggagaaaga aagaactcat ctgatggaag atgtaactgc
3301 aaacaaaaga aggatgaagg aactagaaga taacttgctt taccgcctga caagtaccca
3361 ggggtccctg gtagaagatg aaagtctcat tgtcgtgctg agtaacacaa aaaggacagc
3421 cgaggaggtg acacagaagc tagaaatttc tgctgagaca gaagttcaaa ttaactcagc
3481 ccgggaggaa tacagacctg tggctacgcg gggcagcatc ctctacttcc tcattactga
3541 gatgcgcttg gttaatgaga tgtatcagac ttcgcttcgc cagtttctgg gcttatttga
3601 cctttcctta gccaggtctg tcaagagccc gattacaagc aagaggattg ctaatatcat
3661 cgagcacatg acctacgagg tttataagta tgctgcccga gggctgtacg aggagcacaa
3721 attcctgttc accttgttgc ttaccctaaa gattgacatc cagaggaacc gagtcaagca
3781 tgaagagttt ctcactctta ttaaaggagg tgcctcatta gaccttaaag cttgtcctcc
3841 aaaaccatca aaatggatcc tggacataac atggctgaat ttggtggaac ttagcaaact
3901 cagacagttt tcagatgtcc ttgaccagat atcgagaaat gagaaaatgt ggaaaatttg
3961 gtttgataag gaaaacccgg aggaggaacc tcttccaaat gcctatgata aatctcttga
4021 ctgcttcaga cgtcttctcc ttattagatc ctggtgtcct gacagaacca tcgcccaggc
4081 ccgcaagtac atcgtggact ccatgggaga aaaatatgcc gaaggtgtta ttttagactt
4141 ggagaagacg tgggaggaat ctgatccacg gacgccactc atctgtctcc tgtctatggg
4201 ctcagacccc acagattcca tcattgcctt ggggaagaga ttaaaaatag aaacccgtta
4261 tgtgtccatg ggccagggcc aggaagtcca tgctcggaag ctcttgcagc agaccatggc
4321 gaacggagga tgggcacttc tgcagaactg ccatctggga cttgatttca tggatgagct
4381 gatggacata atcatagaaa ctgagcttgt acatgatgcg ttccgcctct ggatgaccac
4441 cgaggttcat aagcagtttc ccattacact ccttcagatg tccattaaat ttgccaacga
4501 tcctccacaa ggcctccggg caggactgaa aagaacatat agtggtgtca gccaagacct
4561 gctggacgtg agctctgggt cccagtggaa gcccatgctg tacgcagtgg ctttcctgca
4621 ctccactgtc caggagaggc gcaagttcgg tgccctgggg tggaatatcc cctacgaatt
4681 taaccaagcg gactttaatg ccactgtgca gttcatccaa aaccacttgg atgacatgga
4741 tgtcaaaaag ggtgtctcct ggaccaccat ccgctacatg ataggagaga ttcaatatgg
4801 aggcagagtc actgacgact atgataagag attgttgaac acatttgcta aggtttggtt
4861 cagtgaaaat atgtttggac cagatttcag tttttaccaa ggatacaata ttccaaaatg
4921 cagcacagtg gataactatc ttcagtatat ccagagtttg cctgcctatg acagccctga
4981 ggtgtttggg ctgcacccca atgctgacat cacctaccag agcaagctgg ccaaggacgt
5041 gctggacacc atcctaggca tccaacccaa ggacacctct ggtggagggg atgagacccg
5101 ggaggcggtg gtggcccggc tggctgatga tatgctggag aagctgcccc cagactatgt
5161 cccctttgaa gtaaaagaga ggctgcagaa gatggggcca ttccagccta tgaacatttt
5221 cctcaggcag gaaatagaca gaatgcaaag ggtactcagc cttgtccgca gcaccctcac
5281 tgagctgaaa cttgctattg atggcaccat catcatgagc gaaaatctgc gagatgcatt
5341 ggattgcatg tttgatgcta gaatccctgc ttggtggaaa aaagcttctt gggtttctag
5401 tacgctgggt ttctggttta ctgaacttat agaaagaaac agccagttta cctcgtgggt
5461 tttcaatggc cgacctcact gcttttggat gacgggtttt tttaaccccc agggattttt
5521 aactgcaatg cgacaggaaa taactcgggc caacaaaggc tgggctctgg acaatatggt
5581 gctttgcaat gaagtcacca aatggatgaa ggacgacatt tctgcccctc ccacagaggg
5641 tgtctatgtc tatggcttat atcttgaagg tgctggctgg gacaagagga acatgaaact
5701 cattgaatca aagccaaaag tgctctttga gttgatgcct gtcataagga tttatgcaga
5761 aaacaatact ttacgagatc ctcggtttta ctcctgtccc atctataaga agccagttcg
5821 aacggacttg aactacattg ccgctgtgga tctcaggaca gcccagaccc ctgaacactg
5881 ggtgctccgt ggggttgccc ttctgtgtga tgtcaagtaa catgtgggga gtgtccccac
5941 ccaatgcttt ggaaaatgca agatctaaat tattgtaacc tttatttctg tatgactgct
6001 ggacagtgta tgttaggtcg tttatgcaat taatgagctg cataggtttt ccccactcct
6061 taattggatg cttatatttt acttgtttca tcattagtga ccaatgtctg agtttgttga
6121 aaatgttatt tagtgatata aaagtaaatt tacagcatcc taatgaagtg tggccctcaa
6181 atccacagta gtatattttc ttcttacttc gctccgaaga ctgactaggg taagcagaca
6241 gtatttctct gggaggaatt attcttctgt taacgtggcc tggtaacagc caagttcttg
6301 aaggtaacag ggcaagtctg tgctgatttt gcttctattg cctttcgtat ttaggtcaag
6361 ttaagagact tattttcagg gtttcaagca gccaattaaa aatacctttt aaaaaataga
6421 aggaaataga agaatggatt aagaatgtaa atagaaaatt tatgtaaaca tagagaataa
6481 acgtagaaca atgcttaagc ctacttataa ttaataatga aatactaatt gataattctt
6541 ataataaaaa ttaaagctaa aagtaaatga tagcatgctc tcagtaaaac tgatccactc
6601 acaaattgct ggagcaatgt aaatcaaccc aacctttttg taaaatgatt aaatacagaa
6661 agagccataa aaatattcac acccttggat ctttgttttc tctacatcaa ggaaacaatt
6721 taaaagactg aaaacagtct atataaaatt gcatttaata acagaaaaaa atggaaaaat
6781 cataaatatt caatagtcag gctatggtta aggaaattaa gagatatttg gcaaccataa
6841 aaaacaattt tgaagattcc ataatatgaa atggtagacc cagactgtta agtgaaagat
6901 ttagtttaca aaatattgag cacactgtga ttataacagc aaatatattt gcatgtggac
6961 aaagattaga tggcaagata gaaaaataag aacagatgtg atagcaagaa ttatagttgg
7021 cttgaaaaaa tgtgatgatc agg
//