LOCUS AB210032 5544 bp mRNA linear HUM 19-SEP-2015
DEFINITION Homo sapiens mRNA for ARID4B variant protein, clone: hh11923.
ACCESSION AB210032
VERSION AB210032.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5544)
AUTHORS Kikuno,R.F., Nagase,T. and Ohara,O.
TITLE Direct Submission
JOURNAL Submitted (30-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Takahiro Nagase
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
REFERENCE 2
AUTHORS Nakajima,D., Saito,K., Yamakawa,H., Kikuno,R.F., Nakayama,M.,
Ohara,R., Okazaki,N., Koga,H., Nagase,T. and Ohara,O.
TITLE Preparation of a set of expression-ready clones of mammalian long
cDNAs encoding large proteins by the ORF trap cloning method.
JOURNAL Unpublished (2005)
COMMENT
FEATURES Location/Qualifiers
source 1..5544
/clone="hh11923"
/db_xref="H-InvDB:HIT000329907"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 378..4316
/codon_start=1
/gene="ARID4B variant protein"
/note="AT rich interactive domain 4B (RBP1- like), ARID4B
variant"
/product="ARID4B variant protein"
/protein_id="BAE06114.2"
/translation="MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRH
DSSTVEVQDDHIKGPLKVGAIVEVKNLDGAYQEAVINKLTDASWYTVVFDDGDEKTLR
RSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSD
EDEDDRKQIDELLGKVVCVDYISLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFK
DGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWKTELKEDSSSS
EAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLG
YRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYG
FEEYCRSANIEFQMALPEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPR
EEKPIEDEIERKENIKPSLGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDKDDDTT
RVDESLNIKVEAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEDEDDDDNNEEEEF
ECYPPGMKVQVRYGRGKNQKMYEASIKDSDVEGGEVLYLVHYCGWNVRYDEWIKADKI
VRPADKNVPKIKHRKKIKNKLDKEKDKDEKYSPKNCKLRRLSKPPFQTNPSPEMVSKL
DLTDAKNSDTAHIKSIEITSILNGLQASESSAEDSEQEDERGAQDMDNNGKEESKIDH
LTNNRNDLISKEEQNSSSLLEENKVHADLVISKPVSKSPERLRKDIEVLSEDTDYEED
EVTKKRKDVKKDTTDKSSKPQIKRGKRRYCNTEECLKTGSPGKKEEKAKNKESLCMEN
SSNSSSDEDEEETKAKMTPTKKYNGLEEKRKSLRTTGFYSGFSEVAEKRIKLLNNSDE
RLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEAAASPPHPAPEEGVAEESLQTV
AEEESCSPSVELEKPPPVNVDSKPIEEKTVEVNDRKAEFPSSGSNSVLNTPPTTPESP
SSVTVTEGSRQQSSVTVSEPLAPNQEEVRSIKSETDSTIEVDSVAGELQDLQSEGNSS
PAGFDASVSSSSSNQPEPEHPEKACTGQKRVKDAQGGGSSSKKQKRSHKATVVNNKKK
GKGTNSSDSEELSAGESITKSQPVKSVSTGMKSHSTKSPARTQSPGKCGKNGDKDPDL
KEPSNRLPKVYKWSFQMSDLENMTSAERITILQEKLQEIRKHYLSLKSEVASIDRRRK
RLKKKERESAATSSSSSSPSSSSITAAVMLTLAEPSMSSASQNGMSVECR"
BASE COUNT 1951 a 934 c 1263 g 1396 t
ORIGIN
1 ggcggggcca gatgttgatc tcgctcccac ttgtcgggtc tgagcccgga acgggacgtg
61 ggcaggggct ctgtggcggg ccggtcctgc ccgcggccca caggccctcc tggcccctcg
121 gtggcccccg gccggcctct cgctcggacg cggcgcgtgg gggcgcggat tcgctcggcc
181 gggcgccgag gccctagggg agagcggccg gccctgcgcc ggacgccggg cttgttgcga
241 gtttcttctc tgacagaaat ggcgtcattg tcgtagacgg gaaactccgt cgggtctcga
301 caatggggac gggaagctgc cgagctgtgt gcagctgaac ctggtgtttt agaggatacc
361 ttggtcccag agtcatcatg aaggcccttg atgagcctcc ctatttgaca gtgggcactg
421 atgtgagtgc taaatacaga ggagcctttt gtgaagccaa gatcaagaca gcaaaaagac
481 ttgtcaaagt caaggtgaca tttagacatg attcttcaac agtggaagtt caggatgacc
541 acataaaggg cccactaaag gtaggagcta ttgtggaagt gaagaatctt gatggtgcat
601 atcaggaagc tgttatcaat aaactaacag atgcgagttg gtacactgta gtttttgatg
661 acggagatga gaagacactg agacgatctt cactgtgcct gaaaggagag aggcattttg
721 ctgaaagtga aacattagac cagctcccac tcaccaaccc tgagcatttt ggcactccag
781 tcataggaaa gaaaacaaat agaggaagaa gatctaatca tataccagag gaagagtctt
841 catcatcctc cagtgatgaa gatgaggatg ataggaaaca gattgatgag ctactaggca
901 aagttgtatg tgtagattac attagtttgg ataaaaagaa agcactgtgg tttcctgcat
961 tggtggtttg tcctgattgt agtgatgaga ttgctgtaaa aaaggacaat attcttgttc
1021 gatctttcaa agatggaaaa tttacttcag ttccaagaaa agatgtccat gaaattacta
1081 gtgacactgc accaaagcct gatgctgttt taaagcaagc ctttgaacag gcacttgaat
1141 ttcacaaaag tagaactatt cctgctaact ggaagactga attgaaagaa gatagctcta
1201 gcagtgaagc agaggaagaa gaggaggagg aagatgatga aaaagaaaag gaggataata
1261 gcagtgaaga agaagaagaa atagaaccat ttccagaaga aagggagaac tttcttcagc
1321 aattgtacaa atttatggaa gatagaggta cacctattaa caaacgacct gtacttggat
1381 atcgaaattt gaatctcttt aagttattca gacttgtaca caaacttgga ggatttgata
1441 atattgaaag tggagctgtt tggaaacaag tctaccaaga tcttggaatc cctgtcttaa
1501 attcagctgc aggatacaat gttaaatgtg cttataaaaa atacttatat ggttttgagg
1561 agtactgtag atcagccaac attgaatttc agatggcatt gccagagaaa gttgttaaca
1621 agcaatgtaa ggagtgtgaa aatgtaaaag aaataaaagt taaggaggaa aatgaaacag
1681 agatcaaaga aataaagatg gaggaggaga ggaatataat accaagagaa gaaaagccta
1741 ttgaggatga aattgaaaga aaagaaaata ttaagccctc tctgggaagt aaaaagaatt
1801 tattagaatc tatacctaca cattctgatc aggaaaaaga agttaacatt aaaaaaccag
1861 aagacaatga aaatctggat gacaaagatg atgacacaac tagggtagat gaatccctca
1921 acataaaggt agaagctgag gaagaaaaag caaaatctgg agatgaaacg aataaagaag
1981 aagatgaaga tgatgaagaa gcagaagagg aggaggagga ggaagaagaa gaagaggatg
2041 aagatgatga tgacaacaat gaggaagagg agtttgagtg ctatccacca ggcatgaaag
2101 tccaagtgcg gtatggacga gggaaaaatc aaaaaatgta tgaagctagt attaaagatt
2161 ctgatgtcga aggtggagag gtcctttact tggtgcatta ctgcggatgg aatgtgagat
2221 acgatgaatg gattaaagca gataaaatag taagacctgc tgataaaaat gtgccaaaga
2281 taaaacatcg gaagaaaata aagaataaat tagacaaaga aaaagacaaa gatgaaaaat
2341 actctccaaa aaactgtaaa cttcggcgct tgtccaaacc accatttcag acaaatccat
2401 ctcctgaaat ggtatccaaa ctggatctca ctgatgccaa aaactctgat actgctcata
2461 ttaagtccat agaaattact tcgatcctta atggacttca agcttctgaa agttctgctg
2521 aagacagtga gcaggaagat gagagaggtg ctcaagacat ggataataat ggcaaagagg
2581 aatctaagat tgatcatttg accaacaaca gaaatgatct tatttcaaag gaggaacaga
2641 acagttcatc tttgctagaa gaaaacaaag ttcatgcaga tttggtaata tccaaaccag
2701 tgtcaaaatc tccagaaaga ttaaggaaag atatagaagt attatccgaa gatactgatt
2761 atgaagaaga tgaagtcaca aaaaagagaa aggatgtcaa gaaggacaca acagataaat
2821 cttcaaaacc acaaataaaa cgtggtaaaa gaaggtattg caatacagaa gagtgtctaa
2881 aaactggatc acctggcaaa aaggaagaga aggccaagaa caaagaatca ctttgcatgg
2941 aaaacagtag caacagctct tcagatgaag atgaagaaga aacaaaagca aagatgacac
3001 caactaagaa atacaatggt ttggaggaaa aaagaaaatc tctacggaca actggtttct
3061 attcaggatt ttcagaagtg gcagaaaaaa ggattaaact tttaaataac tctgatgaaa
3121 gacttcaaaa cagcagggcc aaagatcgaa aagatgtctg gtcaagtatt cagggacagt
3181 ggcctaaaaa aacgctgaaa gagctttttt cagactctga tactgaggct gcagcttccc
3241 caccgcatcc tgccccagag gagggggtgg cagaggagtc actgcagact gtggctgaag
3301 aggagagttg ttcacccagt gtagaactag aaaaaccacc tccagtcaat gtcgatagta
3361 aacccattga agaaaaaaca gtagaggtca atgacagaaa agcagaattt ccaagtagtg
3421 gcagtaattc agtgctaaat acccctccta ctacacctga atcgccttca tcagtcactg
3481 taacagaagg cagccggcag cagtcttctg taacagtatc agaaccactg gctccaaacc
3541 aagaagaggt tcgaagtatc aagagtgaaa ctgatagcac aattgaggtg gatagtgttg
3601 ctggggagct ccaagacctc cagtctgaag ggaatagctc gccagcaggt tttgatgcca
3661 gtgtgagctc aagcagtagt aatcagccag aaccagaaca tcctgaaaaa gcctgtacag
3721 gtcagaaaag agtgaaagat gctcagggag gaggaagttc atcaaaaaag cagaaaagaa
3781 gccataaagc aacagtggta aacaacaaaa agaagggaaa aggcacaaat agtagtgata
3841 gtgaagaact ttcagctggt gaaagtataa ctaagagtca gccagtcaaa tcagtttcca
3901 ctggaatgaa gtctcatagt accaaatctc ccgcaaggac gcagtctcca ggaaaatgtg
3961 gaaagaatgg tgataaggat cctgatctca aggaacccag taatcgatta cccaaagttt
4021 acaaatggag ttttcagatg tcggacctgg aaaatatgac aagtgccgaa cgcatcacaa
4081 ttcttcaaga aaaacttcaa gaaatcagaa aacattatct gtcattaaaa tctgaagtag
4141 cttccattga tcggaggaga aagcgtttaa agaagaaaga gagagaaagt gctgctacat
4201 cctcatcctc ctcttcacct tcatccagtt ccataacagc tgctgttatg ttaactttag
4261 ctgaaccgtc aatgtccagc gcatcacaaa atggaatgtc agttgagtgc aggtgacagc
4321 aggacttgct aaagcacttt gcacttaatg gctgttgagg gccacttttt ttttatactg
4381 cacagtggca caaaaaaata tcagacaagc actattttat atttaaaaat tgtttcttga
4441 caagctgact tggcacttaa gtgcactttt ttatgaagaa aaagtacaat gaactgcttt
4501 tcctcaagca ataattgttt ccaacttgtc tgggaattgt gtgtctggta actggaaggc
4561 cttccactgt ggcaaatgga ggcttttcac tgcctgtaga gacaatacag taagcatagt
4621 taaggggtgg gtcagaacat gttaagataa cttactgtat atgtattccc ttgtattttg
4681 ttaaagctgg aacatttgat atttttccat ttatttatga aaaaatatga acctattttc
4741 atttgtacaa ggtaattgtt ttttaaagca agtcacctta gggtggcttt aattgtataa
4801 gtcaagcaca tgtaataaat tcaaaacctg cagttaacag gatattagac atcaatcctg
4861 gtaaccaaat attaaagatt ctctttaaaa aagactgaac atgtttacag gtttgaatta
4921 ggctaaaagg tcttgcagtg gcttttcatg gcccttcaaa ttggaatgga actactgtac
4981 tttgccattt ttctataaat cagtattttt ttttaatttt gatatacatt gtgtgaaaaa
5041 agaaaatggc taataaactg tattaaatct taaacaatgt ataaagattg tacttagcca
5101 gttcaaagtg tatatttatt cataatgaat tataacagtt atatttttgt gttttcttgt
5161 aaatgtttct tttcccttaa atacagataa ttcatttgta ttgcttattt tattatgagc
5221 tacaacaaaa ggacttcagg aacaagtaat gtattagtat ggttcaagat tgttgatagg
5281 aactgtctca aaaggatggt ggttatttta aatataaata gctaatgggg gtggtaggcc
5341 tataaaatta aatgccttgt ataaaatcca aaatgaatgc aaaattgttt tcacttgtat
5401 tgactttatg ttgtatgatt ccaatctctg ttctgtttgg cacttgtatt taattcttca
5461 cctttgtaag acatttgtat attgtggatg tgttcattca agctatttaa tatctggcac
5521 tgttaataca cagtacttta ttgt
//