LOCUS AB210023 4886 bp mRNA linear HUM 19-SEP-2015
DEFINITION Homo sapiens mRNA for STAG1 variant protein, clone: ha02979.
ACCESSION AB210023
VERSION AB210023.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4886)
AUTHORS Kikuno,R.F., Nagase,T. and Ohara,O.
TITLE Direct Submission
JOURNAL Submitted (30-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Takahiro Nagase
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
REFERENCE 2
AUTHORS Nakajima,D., Saito,K., Yamakawa,H., Kikuno,R.F., Nakayama,M.,
Ohara,R., Okazaki,N., Koga,H., Nagase,T. and Ohara,O.
TITLE Preparation of a set of expression-ready clones of mammalian long
cDNAs encoding large proteins by the ORF trap cloning method.
JOURNAL Unpublished (2005)
COMMENT
FEATURES Location/Qualifiers
source 1..4886
/cell_line="KG-1"
/cell_type="myeloblast"
/clone="ha02979"
/db_xref="H-InvDB:HIT000329898"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
CDS 258..4034
/codon_start=1
/gene="STAG1 variant protein"
/note="stromal antigen 1, STAG1 variant"
/product="STAG1 variant protein"
/protein_id="BAE06105.2"
/translation="MITSELPVLQDSTNETTAHSDAGSELEETEVKGKRKRGRPGRPP
STNKKPRKSPGEKSRIEAGIRGAGRGRANGHPQQNGEGEPVTLFEVVKLGKSAMQSVV
DDWIESYKQDRDIALLDLINFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSG
DYPLTMPGPQWKKFRSNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAF
RHTSTLAAMKLMTALVNVALNLSIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKE
LQENQDEIENMMNSIFKGIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKY
VGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVE
AIRLVTLILHGSEEALSNEDCENVYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQAEEA
LAKRRGRNSPNGNLIRMLVLFFLESELHEHAAYLVDSLWESSQELLKDWECMTELLLE
EPVQGEEAMSDRQESALIELMVCTIRQAAEAHPPVGRGTGKRVLTAKERKTQIDDRNK
LTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEIYSTGRMEKHLDALLKQIKFVV
EKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQLIDEFVDRFNHSVEDLLQEGEE
ADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLLKTGIEHGAMPEQIVVQALQC
SHYSILWQLVKITDGSPSKEDLLVLRKTVKSFLAVCQQCLSNVNTPVKEQAFMLLCDL
LMIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDHVFIDQDEENQSMEGDEEDEA
NKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMKYYNDYGDIIKETLSKTRQI
DKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELARRFALTFGLDQIKTRE
AVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLEVLSEFSSKLLRQDKKTVHSYLEKFL
TEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNSGSSSSKTSSVRNKKGRPPLHKKR
VEDESLDNTWLNRTDTMIQTPGPLPAPQLTSTVLRENSRPMGDQIQEPESEHGSEPDF
LHNPQMQISWLGQPKLEDLNRKDRTGMNYMKVRTGVRHAVRGLMEEDAEPIFEDVMMS
SRSQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMPMF"
BASE COUNT 1551 a 892 c 1107 g 1336 t
ORIGIN
1 ggaaaatgcc accagatggc gggttaggat tgcagctccg ttgaaggcgc ggcccccgct
61 cccgaacccc cggcgaccac cccgtaacaa cccccccaca tcgggaataa cacaccggag
121 acttttgggg ggaaactagg tcgatggtcg gcggcgcccg gatgggcagc tgaggattgc
181 ctttgaggtt attttaaaag ttttgagttg tacagcactt gattattttg ctgcattgtg
241 aaaggacctc tccagcaatg attacttcag aattaccagt gttacaggat tcaactaatg
301 aaactactgc ccattccgat gctggcagcg agcttgaaga aacagaggtc aaaggaaaaa
361 gaaaaagggg tcgtcctggc cggcctccat ctacaaataa gaaacctcga aaatctccag
421 gtgagaagag cagaattgaa gctggaatta gaggagcagg ccgtggaaga gctaatggac
481 accctcaaca gaatggggaa ggggagcctg tcacattatt tgaggtggtg aaactgggga
541 aaagtgcaat gcagtccgtg gtggatgact ggattgaatc atataaacaa gacagggaca
601 tcgcacttct ggatttaatc aactttttta tccagtgttc aggatgtcga ggtactgtga
661 gaatagagat gtttcgaaat atgcagaatg cagaaatcat cagaaaaatg actgaagaat
721 ttgatgagga cagtggtgat tatcctctta ccatgcctgg acctcagtgg aaaaaatttc
781 gttcaaactt ttgtgaattt attggagtcc tgattcgaca gtgtcagtat agcataattt
841 atgatgagta tatgatggac acagtaatct cccttttgac gggtttgtca gactcccagg
901 tcagagcttt taggcataca agtaccctgg ctgccatgaa gctcatgact gctctggtga
961 atgttgcctt aaacctcagt attcatcagg ataataccca gagacaatat gaagccgaga
1021 gaaataaaat gattgggaag agagccaatg aaaggttgga gttactactt cagaaacgca
1081 aagagctgca agaaaatcag gatgaaatcg aaaatatgat gaactctatt tttaagggta
1141 tatttgttca tagataccgt gatgctattg ctgagattag agccatttgt attgaagaaa
1201 ttggagtatg gatgaaaatg tatagtgatg ccttcctaaa tgacagttac ctaaaatatg
1261 ttggctggac tcttcatgac aggcaagggg aagtcaggct gaagtgtttg aaagctctgc
1321 agagtctata taccaataga gaattattcc ccaaattgga actattcact aaccgattca
1381 aggatcgcat tgtatcaatg acacttgata aagaatatga tgttgctgtg gaagctattc
1441 gattggttac tctgatactt catggaagtg aagaagctct ttccaatgaa gactgtgaaa
1501 atgtttacca cttggtgtac tcggcacatc gccctgttgc tgtggcagct ggagagttcc
1561 ttcacaaaaa gctatttagc agacatgacc cacaagcaga agaagcatta gcaaagagga
1621 ggggaagaaa cagcccgaat ggaaacctca ttaggatgct ggttcttttc tttcttgaaa
1681 gtgagttaca tgaacatgca gcctacttgg tggacagttt atgggagagc tctcaagaac
1741 tgttgaaaga ctgggaatgt atgacagagt tgctattaga agaacctgtt caaggagagg
1801 aagcaatgtc tgatcgtcaa gagagtgctc ttatagagct aatggtttgt acaattcgtc
1861 aagctgctga ggcacatcct ccagtgggaa ggggtaccgg caagagagtg ctaactgcca
1921 aagaaaggaa aactcaaatt gatgatagaa acaaattgac tgaacatttt attattacac
1981 ttcctatgtt actgtcaaag tattctgcag atgcagagaa ggtagcaaac ttgctacaaa
2041 tcccacagta ttttgattta gaaatctaca gcacaggtag aatggaaaag catctggatg
2101 ctttattaaa acagattaag tttgttgtgg agaaacacgt agaatcagat gttctagaag
2161 cctgcagtaa aacctatagt atcttatgca gtgaagaata taccatccag aacagagttg
2221 acatagctcg aagccagctg attgatgagt ttgtagatcg attcaatcat tctgtggaag
2281 acctattgca agagggagaa gaagctgatg atgatgacat ttacaatgtt ctttctacat
2341 taaagcggtt aacttctttt cacaatgcac atgatctcac aaaatgggat ctctttggta
2401 attgctacag attattgaag actggaattg aacatggagc catgccagaa cagatagtcg
2461 tgcaagcact gcagtgttcc cattattcga ttctttggca gttggtgaaa attactgatg
2521 gctctccttc caaagaggat ttgttggtat tgaggaaaac ggtgaaatcc tttttggctg
2581 tttgccagca gtgcctgtct aatgttaata ctccagtgaa agaacaggct ttcatgttac
2641 tctgtgatct tctgatgatt ttcagccacc aattaatgac aggtggcaga gagggccttc
2701 agcctttggt gttcaatcca gatactggac tccaatctga actcctcagt tttgtgatgg
2761 atcacgtttt tattgaccaa gacgaggaga accagagcat ggagggtgat gaagaagatg
2821 aagctaataa aattgaggcc ttacataaaa gaaggaatct acttgctgct ttcagcaaac
2881 ttatcattta tgacattgtt gacatgcatg cagctgcaga catcttcaaa cactacatga
2941 agtattacaa tgactatggt gatattatta aggaaacact gagtaaaacc aggcagattg
3001 ataaaattca gtgtgccaag actctcattc tcagtttgca acagttattt aatgaacttg
3061 ttcaagagca aggtcccaac ctagatagga catctgccca tgtcagtggc attaaagaac
3121 tggcacgtcg ctttgccctt acatttggat tggaccagat taagacacga gaagcagttg
3181 ccacacttca caaggatggc atagagtttg catttaaata ccaaaatcag aaaggacaag
3241 agtatccacc tcctaatctg gcttttcttg aagtactaag tgaattttct tctaaacttc
3301 ttcgacagga caaaaagaca gttcattcat acctagagaa attccttacc gagcagatga
3361 tggaaaggag ggaggatgta tggcttccac tcatctccta tagaaattca ttagtcactg
3421 ggggtgaaga tgatagaatg tctgtgaaca gtggaagtag cagcagcaaa acctcatcag
3481 taaggaataa gaaaggacga cctccacttc ataaaaaacg agtagaagat gagagtctgg
3541 ataacacatg gctaaacagg actgacacca tgattcagac tcctggcccc ctgccagcac
3601 cacaactcac atccactgta ctgcgggaga acagtcggcc catgggagac cagattcaag
3661 aacctgagtc tgaacatggt tctgaaccag actttttaca caatcctcag atgcagatct
3721 cttggttagg ccagccgaag ttagaagact taaatcggaa ggacagaaca ggaatgaact
3781 acatgaaagt gagaactgga gtgaggcatg ctgttcgggg tctaatggag gaagatgctg
3841 agcccatctt tgaagatgtg atgatgtcat cccgaagcca gttagaagat atgaatgaag
3901 aatttgagga caccatggtt attgatctgc ctccatcaag aaatcggcga gagagagctg
3961 agctaaggcc agacttcttt gactctgcag ctatcataga agatgattca ggatttggaa
4021 tgcctatgtt ctgaagtctg aagaaaattt acaaatctgg aactctatta tttagagcta
4081 gaggcctata tactgtgata gcttgtatgg ggaaaaacac ttttgatgtg atctgatttg
4141 ttttttaatc aaatgattaa ggtcaatccc tttttgcagt gacagaagag gagcatgtaa
4201 attacccaag ggaatgttgg tgaatgtcaa ctcagaaaga ctgacctgaa aatcatttgt
4261 gtcctactat tggacttatc ccaatacaga tgtgtgtgtt tttctggagg gaggaagaaa
4321 ttttaaattt ttaaaacagc tgtcaagata aacactgtta tacacctgtt ttatgaaaac
4381 tcaacattga gtaaaaaaaa acatattttt aactttattt tcctgttgta caatttaaaa
4441 accgttttaa cattttgcct ttttatgttt taaaagctaa ccatttttat taaacctatg
4501 agtaagcagc tcatcctaat tgcgaagagt gttttggagt tcactggatt tggttgacct
4561 ttgtggaaca caaataatga aggagcagaa cattgacaag ctaagatgaa attctgacat
4621 agtacatctc tgccaaaaac cacacaccct ctgtggatat ggatatgaat tcccagattt
4681 tatatactct tgaataaaag gtttattttt atttataagt gggcataaaa taagaaatgt
4741 ccatgcagcc atttttccaa cagatgctgt acaccgttca ttttatatag actagggaga
4801 ttcaaataca gtgcattttc tattggtatt tgttctgtgc atttttagca acttctacca
4861 gcaaataaag tattctcagt aaaacg
//