LOCUS AB210016 3725 bp mRNA linear HUM 02-JUL-2005
DEFINITION Homo sapiens mRNA for C9orf88 variant protein, partial cds, clone:
fj09409.
ACCESSION AB210016
VERSION AB210016.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3725)
AUTHORS Kikuno,R.F., Nagase,T. and Ohara,O.
TITLE Direct Submission
JOURNAL Submitted (30-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Takahiro Nagase
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
REFERENCE 2
AUTHORS Nakajima,D., Saito,K., Yamakawa,H., Kikuno,R.F., Nakayama,M.,
Ohara,R., Okazaki,N., Koga,H., Nagase,T. and Ohara,O.
TITLE Preparation of a set of expression-ready clones of mammalian long
cDNAs encoding large proteins by the ORF trap cloning method.
JOURNAL Unpublished (2005)
COMMENT
FEATURES Location/Qualifiers
source 1..3725
/clone="fj09409"
/db_xref="H-InvDB:HIT000329891"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1..2222
/codon_start=3
/gene="C9orf88 variant protein"
/note="chromosome 9 open reading frame 88, C9orf88
variant"
/product="C9orf88 variant protein"
/protein_id="BAE06098.1"
/translation="HLDDARRQHIAEKTGKILTEFLQFYEDQYGVALFNSMRHEIEGT
GLPQAQLLWRKVPLDERIVFSGNLFQHQEDSKKWRNRFSLVPHNYGLVLYENKAAYER
QVPPRAVINSAGYKILTSVDQYLELIGNSLPGTTAKSGSAPILKCPTQFPLILWHPYA
RHYYFCMMTEAEQDKWQAVLQDCIRHCNNGIPEDSKVEGPAFTDAIRMYRQSKELYGT
WEMLCGNEVQILSNLVMEELGPELKAELGPRLKGKPQERQRQWIQISDAVYHMVYEQA
KARFEEVLSKVQQVQPAMQAVIRTDMDQIITSKEHLASKIRAFILPKAEVCVRNHVQP
YIPSILEALMVPTSQGFTEVRDVFFKEVTDMNLNVINEGGIDKLGEYMEKLSRLAYHP
LKMQSCYEKMESLRLDGLQQRFDVSSTSVFKQRAQIHMREQMDNAVYTFETLLHQELG
KGPTKEELCKSIQRVLERVLKKYDYDSSSVRKRFFREALLQISIPFLLKKLAPTCKSE
LPRFQELIFEDFARFILVENTYEEVVLQTVMKDILQAVKEAAVQRKHNLYRDSMVMHN
SDPNLHLLAEGAPIDWGEEYSNSGGGGSPSPSTPESATLSEKRRRAKQVVSVVQDEEV
GLPFEASPESPPPASPDGVTEIRGLLAQGLRPESPPPAGPLLNGAPAGESPQPKAAPE
ASSPPASPLQHLLPGKAVDLGPPKPSDQETGEQVSSPSSHPALHTTTEDSAGVQTEF"
BASE COUNT 702 a 1147 c 1179 g 697 t
ORIGIN
1 cgcacctgga cgacgcccgg cgccagcaca tcgcagaaaa aaccgggaag atcctgacgg
61 agttcctcca gttctatgaa gaccagtatg gcgtggctct cttcaacagc atgcgccatg
121 agattgaggg cacggggctg ccgcaggccc agctgctctg gcgcaaggtg ccactggacg
181 agcgcatcgt cttctcgggg aacctcttcc agcaccagga ggacagcaag aagtggagaa
241 accgcttcag cctcgtgccc cacaactacg ggctggtgct ctacgaaaac aaagcggcct
301 atgagcggca ggtcccacca cgagccgtca tcaacagtgc aggctacaaa atcctcacgt
361 ccgtggacca atacctggag ctcattggca actccttacc agggaccacg gcaaagtcgg
421 gcagtgcccc catcctcaag tgccccacac agttcccgct catcctctgg catccttatg
481 cgcgtcacta ctacttctgc atgatgacag aagccgagca ggacaagtgg caggctgtgc
541 tgcaggactg catccggcac tgcaacaatg gaatccctga ggactccaag gtagagggcc
601 ctgcgttcac agatgccatc cgcatgtacc gacagtccaa ggagctgtac ggcacctggg
661 agatgctgtg tgggaacgag gtgcagatcc tgagcaacct ggtgatggag gagctgggcc
721 ctgagctgaa ggcagagctc ggcccgcggc tgaaggggaa accgcaggag cggcagcggc
781 agtggatcca gatctcggac gccgtgtacc acatggtgta cgagcaggcc aaggcgcgct
841 tcgaggaggt gctgtccaag gtgcagcagg tgcagccggc catgcaggcc gtcatccgaa
901 ctgacatgga ccaaattatc acctccaagg agcaccttgc cagcaagatc cgagccttca
961 tcctccccaa ggcagaggtg tgcgtgcgga accatgtcca gccctacatc ccatccatcc
1021 tggaggccct gatggtcccc accagccagg gcttcactga ggtgcgagat gtcttcttca
1081 aggaggtcac ggacatgaac ctgaacgtca tcaacgaggg cggcattgac aagctgggcg
1141 agtacatgga gaagctgtcc cggctggcgt accaccccct gaagatgcag agctgctatg
1201 agaagatgga gtcgctgcga ctggacgggc tgcagcagcg atttgatgtg tccagcacgt
1261 ccgtgttcaa gcagcgagcc cagatccaca tgcgggagca aatggacaat gccgtgtata
1321 cgttcgagac cctcctgcac caggagctgg ggaaggggcc caccaaggag gagctgtgca
1381 agtccatcca gcgggtcctg gagcgggtgc tgaagaaata cgactacgac agcagctctg
1441 tgcggaagag gttcttccgg gaggcgctgc tgcagatcag catcccgttc ctgctcaaga
1501 agctggcccc tacctgcaag tcggagctgc cccggttcca ggagctgatc ttcgaggact
1561 ttgccaggtt catcctggtg gaaaacacgt acgaggaggt ggtgctgcag accgtcatga
1621 aggacatcct gcaggctgtg aaggaggccg cggtgcagag gaagcacaac ctctaccggg
1681 acagcatggt catgcacaac agcgacccca acctgcacct gctggccgag ggcgccccca
1741 tcgactgggg cgaggagtac agcaacagcg gcgggggcgg cagccccagc cccagcaccc
1801 cggagtcagc caccctctcg gaaaagcgac ggcgcgccaa gcaggtggtc tctgtggtcc
1861 aggatgagga ggtggggctg ccctttgagg ctagccctga gtcaccacca cctgcgtccc
1921 cggacggtgt cactgagatc cgaggcctgc tggcccaagg tctgcggcct gagagccccc
1981 caccagccgg ccccctgctc aacggggccc ccgctgggga gagtccccag cctaaggccg
2041 cccccgaggc ctcctcgccg cctgcctcac ccctccagca tctcctgcct ggaaaggctg
2101 tggaccttgg gccccccaag cccagcgacc aggagactgg agagcaggtg tccagcccca
2161 gcagccaccc cgccctccac accaccaccg aggacagtgc aggggtgcag actgagttct
2221 aggccagtgg gtccctgact gctgcacatg gcacaggccg ttcccttccg gacccaggca
2281 ggctcagctc tggggagggc accctggtct gtgccttgtg ggtggaggcg gggcagggct
2341 gtgtggcacc gccagggagc gggcccacct gagtcacttt attgggttca gtcaacactt
2401 tcttgctccc tgttttctct tctgtgggat gatctcagat gcaggggctg gttttggggt
2461 tttcctgctt gtgccaaggg ctggacactg ctggggggct ggaaagcccc tcccttcctg
2521 tccttctgtg gcctccatcc cctcatgggt gctgccatcc ttcctggaga gagggaggtg
2581 aaagctggtg tgagcccagt gggttcccgc ccactcaccc aggagctggc tgggccagga
2641 ccgggagagg gagcactgct gccctcctgg ccctgctcct tccgcagtta ggggtggacc
2701 gagcctcgct ttccccactg ttctggaggg aaggggaagg agggggtctt caggctggag
2761 ccaggctggg ggtgctgggt ggagagatga gatttagggg gtgcctcatg gggtgggcag
2821 gcctggggtg aaatgagaaa ggcccagaac gtgcaggtct gcggagggga agtgtcctga
2881 gtgaaggagg ggacccccat cctgggggat gctgggagtg agtgagtgag tgagatggct
2941 gagtgagggt tatggggagc ctgaggtttt atgggcctgt gtatcccctt ctcccggccc
3001 cagcctgcct ccctcctgcc cgcctggccc acaggtctcc ctctggtccc tgtccctctg
3061 gtggttgggg atggagcggc agcaaggggt gtaatggggc tgggttctgt cttctacagg
3121 ccaccccgag gtcctcagtg gttgcctggg gagccggacg gggctcctga ggggtacagg
3181 ttgggtgggc cctccctgag ggtctggggt caggctttgg cctctgctgc ctctcagtca
3241 ccaagtcacc tccctctgaa aatccagtcc cttctttgga tgtccttgtg agtcactctg
3301 ggcctggctg tcgtccctcc tcagcttctt gttcctggga caagggtcaa gccaggatgg
3361 gcccaggcct gggatccccc accccaggac ccccaggccc cctcccctgc tgctttgcgg
3421 ggggcagggc agaaatggac tccttttggg tccccgaggt ggggtcccct cccagccctg
3481 catcctccgt gccgtagacc tgctccccag aggaggggcc ttgacccaca ggacgtgtgg
3541 tggcgcctgg cactcaggga cccccagctg ccccagccct ggtctctggc gcatctcttc
3601 cctcttgtcc cgaagatctg cgcctctagt gccttttgag gggttcccat catccctccc
3661 tgatattgta ttgaaaatat tatgcacact gttcatgctt ctactaatca ataaacgctt
3721 tattt
//