LOCUS AB210016 3725 bp mRNA linear HUM 02-JUL-2005 DEFINITION Homo sapiens mRNA for C9orf88 variant protein, partial cds, clone: fj09409. ACCESSION AB210016 VERSION AB210016.1 KEYWORDS FLI_CDNA. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3725) AUTHORS Kikuno,R.F., Nagase,T. and Ohara,O. TITLE Direct Submission JOURNAL Submitted (30-MAR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Takahiro Nagase Kazusa DNA Research Institute, Department of Human Gene Research; 2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan REFERENCE 2 AUTHORS Nakajima,D., Saito,K., Yamakawa,H., Kikuno,R.F., Nakayama,M., Ohara,R., Okazaki,N., Koga,H., Nagase,T. and Ohara,O. TITLE Preparation of a set of expression-ready clones of mammalian long cDNAs encoding large proteins by the ORF trap cloning method. JOURNAL Unpublished (2005) COMMENT FEATURES Location/Qualifiers source 1..3725 /clone="fj09409" /db_xref="H-InvDB:HIT000329891" /db_xref="taxon:9606" /mol_type="mRNA" /note="vector:pBluescriptII SK plus" /organism="Homo sapiens" /tissue_type="brain" CDS <1..2222 /codon_start=3 /gene="C9orf88 variant protein" /note="chromosome 9 open reading frame 88, C9orf88 variant" /product="C9orf88 variant protein" /protein_id="BAE06098.1" /translation="HLDDARRQHIAEKTGKILTEFLQFYEDQYGVALFNSMRHEIEGT GLPQAQLLWRKVPLDERIVFSGNLFQHQEDSKKWRNRFSLVPHNYGLVLYENKAAYER QVPPRAVINSAGYKILTSVDQYLELIGNSLPGTTAKSGSAPILKCPTQFPLILWHPYA RHYYFCMMTEAEQDKWQAVLQDCIRHCNNGIPEDSKVEGPAFTDAIRMYRQSKELYGT WEMLCGNEVQILSNLVMEELGPELKAELGPRLKGKPQERQRQWIQISDAVYHMVYEQA KARFEEVLSKVQQVQPAMQAVIRTDMDQIITSKEHLASKIRAFILPKAEVCVRNHVQP YIPSILEALMVPTSQGFTEVRDVFFKEVTDMNLNVINEGGIDKLGEYMEKLSRLAYHP LKMQSCYEKMESLRLDGLQQRFDVSSTSVFKQRAQIHMREQMDNAVYTFETLLHQELG KGPTKEELCKSIQRVLERVLKKYDYDSSSVRKRFFREALLQISIPFLLKKLAPTCKSE LPRFQELIFEDFARFILVENTYEEVVLQTVMKDILQAVKEAAVQRKHNLYRDSMVMHN SDPNLHLLAEGAPIDWGEEYSNSGGGGSPSPSTPESATLSEKRRRAKQVVSVVQDEEV GLPFEASPESPPPASPDGVTEIRGLLAQGLRPESPPPAGPLLNGAPAGESPQPKAAPE ASSPPASPLQHLLPGKAVDLGPPKPSDQETGEQVSSPSSHPALHTTTEDSAGVQTEF" BASE COUNT 702 a 1147 c 1179 g 697 t ORIGIN 1 cgcacctgga cgacgcccgg cgccagcaca tcgcagaaaa aaccgggaag atcctgacgg 61 agttcctcca gttctatgaa gaccagtatg gcgtggctct cttcaacagc atgcgccatg 121 agattgaggg cacggggctg ccgcaggccc agctgctctg gcgcaaggtg ccactggacg 181 agcgcatcgt cttctcgggg aacctcttcc agcaccagga ggacagcaag aagtggagaa 241 accgcttcag cctcgtgccc cacaactacg ggctggtgct ctacgaaaac aaagcggcct 301 atgagcggca ggtcccacca cgagccgtca tcaacagtgc aggctacaaa atcctcacgt 361 ccgtggacca atacctggag ctcattggca actccttacc agggaccacg gcaaagtcgg 421 gcagtgcccc catcctcaag tgccccacac agttcccgct catcctctgg catccttatg 481 cgcgtcacta ctacttctgc atgatgacag aagccgagca ggacaagtgg caggctgtgc 541 tgcaggactg catccggcac tgcaacaatg gaatccctga ggactccaag gtagagggcc 601 ctgcgttcac agatgccatc cgcatgtacc gacagtccaa ggagctgtac ggcacctggg 661 agatgctgtg tgggaacgag gtgcagatcc tgagcaacct ggtgatggag gagctgggcc 721 ctgagctgaa ggcagagctc ggcccgcggc tgaaggggaa accgcaggag cggcagcggc 781 agtggatcca gatctcggac gccgtgtacc acatggtgta cgagcaggcc aaggcgcgct 841 tcgaggaggt gctgtccaag gtgcagcagg tgcagccggc catgcaggcc gtcatccgaa 901 ctgacatgga ccaaattatc acctccaagg agcaccttgc cagcaagatc cgagccttca 961 tcctccccaa ggcagaggtg tgcgtgcgga accatgtcca gccctacatc ccatccatcc 1021 tggaggccct gatggtcccc accagccagg gcttcactga ggtgcgagat gtcttcttca 1081 aggaggtcac ggacatgaac ctgaacgtca tcaacgaggg cggcattgac aagctgggcg 1141 agtacatgga gaagctgtcc cggctggcgt accaccccct gaagatgcag agctgctatg 1201 agaagatgga gtcgctgcga ctggacgggc tgcagcagcg atttgatgtg tccagcacgt 1261 ccgtgttcaa gcagcgagcc cagatccaca tgcgggagca aatggacaat gccgtgtata 1321 cgttcgagac cctcctgcac caggagctgg ggaaggggcc caccaaggag gagctgtgca 1381 agtccatcca gcgggtcctg gagcgggtgc tgaagaaata cgactacgac agcagctctg 1441 tgcggaagag gttcttccgg gaggcgctgc tgcagatcag catcccgttc ctgctcaaga 1501 agctggcccc tacctgcaag tcggagctgc cccggttcca ggagctgatc ttcgaggact 1561 ttgccaggtt catcctggtg gaaaacacgt acgaggaggt ggtgctgcag accgtcatga 1621 aggacatcct gcaggctgtg aaggaggccg cggtgcagag gaagcacaac ctctaccggg 1681 acagcatggt catgcacaac agcgacccca acctgcacct gctggccgag ggcgccccca 1741 tcgactgggg cgaggagtac agcaacagcg gcgggggcgg cagccccagc cccagcaccc 1801 cggagtcagc caccctctcg gaaaagcgac ggcgcgccaa gcaggtggtc tctgtggtcc 1861 aggatgagga ggtggggctg ccctttgagg ctagccctga gtcaccacca cctgcgtccc 1921 cggacggtgt cactgagatc cgaggcctgc tggcccaagg tctgcggcct gagagccccc 1981 caccagccgg ccccctgctc aacggggccc ccgctgggga gagtccccag cctaaggccg 2041 cccccgaggc ctcctcgccg cctgcctcac ccctccagca tctcctgcct ggaaaggctg 2101 tggaccttgg gccccccaag cccagcgacc aggagactgg agagcaggtg tccagcccca 2161 gcagccaccc cgccctccac accaccaccg aggacagtgc aggggtgcag actgagttct 2221 aggccagtgg gtccctgact gctgcacatg gcacaggccg ttcccttccg gacccaggca 2281 ggctcagctc tggggagggc accctggtct gtgccttgtg ggtggaggcg gggcagggct 2341 gtgtggcacc gccagggagc gggcccacct gagtcacttt attgggttca gtcaacactt 2401 tcttgctccc tgttttctct tctgtgggat gatctcagat gcaggggctg gttttggggt 2461 tttcctgctt gtgccaaggg ctggacactg ctggggggct ggaaagcccc tcccttcctg 2521 tccttctgtg gcctccatcc cctcatgggt gctgccatcc ttcctggaga gagggaggtg 2581 aaagctggtg tgagcccagt gggttcccgc ccactcaccc aggagctggc tgggccagga 2641 ccgggagagg gagcactgct gccctcctgg ccctgctcct tccgcagtta ggggtggacc 2701 gagcctcgct ttccccactg ttctggaggg aaggggaagg agggggtctt caggctggag 2761 ccaggctggg ggtgctgggt ggagagatga gatttagggg gtgcctcatg gggtgggcag 2821 gcctggggtg aaatgagaaa ggcccagaac gtgcaggtct gcggagggga agtgtcctga 2881 gtgaaggagg ggacccccat cctgggggat gctgggagtg agtgagtgag tgagatggct 2941 gagtgagggt tatggggagc ctgaggtttt atgggcctgt gtatcccctt ctcccggccc 3001 cagcctgcct ccctcctgcc cgcctggccc acaggtctcc ctctggtccc tgtccctctg 3061 gtggttgggg atggagcggc agcaaggggt gtaatggggc tgggttctgt cttctacagg 3121 ccaccccgag gtcctcagtg gttgcctggg gagccggacg gggctcctga ggggtacagg 3181 ttgggtgggc cctccctgag ggtctggggt caggctttgg cctctgctgc ctctcagtca 3241 ccaagtcacc tccctctgaa aatccagtcc cttctttgga tgtccttgtg agtcactctg 3301 ggcctggctg tcgtccctcc tcagcttctt gttcctggga caagggtcaa gccaggatgg 3361 gcccaggcct gggatccccc accccaggac ccccaggccc cctcccctgc tgctttgcgg 3421 ggggcagggc agaaatggac tccttttggg tccccgaggt ggggtcccct cccagccctg 3481 catcctccgt gccgtagacc tgctccccag aggaggggcc ttgacccaca ggacgtgtgg 3541 tggcgcctgg cactcaggga cccccagctg ccccagccct ggtctctggc gcatctcttc 3601 cctcttgtcc cgaagatctg cgcctctagt gccttttgag gggttcccat catccctccc 3661 tgatattgta ttgaaaatat tatgcacact gttcatgctt ctactaatca ataaacgctt 3721 tattt //