LOCUS AB209894 6898 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for integrin alpha-V precursor variant protein.
ACCESSION AB209894
VERSION AB209894.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6898)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..6898
/clone="eg01636"
/db_xref="H-InvDB:HIT000329829"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003002610"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="aorta endothelial cell"
CDS <1..3298
/codon_start=2
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="integrin alpha-V precursor variant"
/protein_id="BAD93131.1"
/translation="ERRSRREAKDRLRCCPRPARSAPLVPGGRSEAQPSCLPRSCPGL
AEKRAAGKFGRAQAAGRGHWAPRWGGGRWLPLPAWRPARTSAMAFPPRRRLRLGPRGL
PLLLSGLLLPLCRAFNLDVDSPAEYSGPEGSYFGFAVDFFVPSASSRMFLLVGAPKAN
TTQPGIVEGGQVLKCDWSSTRRCQPIEFDATGNRDYAKDDPLEFKSHQWFGASVRSKQ
DKILACAPLYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSRQLISDQVAEIVSKYD
PNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVY
IYDGKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEV
GQVSVSLQRASGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKK
GIVYIFNGRSTGLNAVPSQILEGQWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFG
VDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGV
LPRKLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRD
ESEFRDKLTPITIFMEYRLDYRTAADTTGLQPILNQFTPANISRQAHILLDCGEDNVC
KPKLEVSVDSDQKKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNN
EALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQ
SSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHIFLPIPNWEHKENPETEEDVGPVV
QHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIDGPMNCTSDMEINPLRIK
ISSLQTTEKNDTVAGQGERDHLITKRDLALSEGDIHTLGCGVAQCLKIVCQVGRLDRG
KSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNVIEFPYKNLPIEDITNSTLVTTN
VTWGIQPAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQEREQLQP
HENGEGNSET"
BASE COUNT 2059 a 1224 c 1406 g 2209 t
ORIGIN
1 ggagcggcgg agccggaggg aagcaaagga ccgtctgcgc tgctgtcccc gccccgcgcg
61 ctctgcgccc ctcgtccctg gcggtcgctc cgaagctcag ccctcttgcc tgccccggag
121 ctgtcccggg ctagccgaga agagagcggc cggcaagttt gggcgcgcgc aggcggcggg
181 ccgcgggcac tgggcgcctc gctggggcgg ggggaggtgg ctaccgctcc cggcttggcg
241 tcccgcgcgc acttcggcga tggcttttcc gccgcggcga cggctgcgcc tcggtccccg
301 cggcctcccg cttcttctct cgggactcct gctacctctg tgccgcgcct tcaacctaga
361 cgtggacagt cctgccgagt actctggccc cgagggaagt tacttcggct tcgccgtgga
421 tttcttcgtg cccagcgcgt cttcccggat gtttcttctc gtgggagctc ccaaagcaaa
481 caccacccag cctgggattg tggaaggagg gcaggtcctc aaatgtgact ggtcttctac
541 ccgccggtgc cagccaattg aatttgatgc aacaggcaat agagattatg ccaaggatga
601 tccattggaa tttaagtccc atcagtggtt tggagcatct gtgaggtcga aacaggataa
661 aattttggcc tgtgccccat tgtaccattg gagaactgag atgaaacagg agcgagagcc
721 tgttggaaca tgctttcttc aagatggaac aaagactgtt gagtatgctc catgtagatc
781 acgtcagctt atttcggatc aagtggcaga aatcgtatct aaatacgacc ccaatgttta
841 cagcatcaag tataataacc aattagcaac tcggactgca caagctattt ttgatgacag
901 ctatttgggt tattctgtgg ctgtcggaga tttcaatggt gatggcatag atgactttgt
961 ttcaggagtt ccaagagcag caaggacttt gggaatggtt tatatttatg atgggaagaa
1021 catgtcctcc ttatacaatt ttactggcga gcagatggct gcatatttcg gattttctgt
1081 agctgccact gacattaatg gagatgatta tgcagatgtg tttattggag cacctctctt
1141 catggatcgt ggctctgatg gcaaactcca agaggtgggg caggtctcag tgtctctaca
1201 gagagcttca ggagacttcc agacgacaaa gctgaatgga tttgaggtct ttgcacggtt
1261 tggcagtgcc atagctcctt tgggagatct ggaccaggat ggtttcaatg atattgcaat
1321 tgctgctcca tatgggggtg aagataaaaa aggaattgtt tatatcttca atggaagatc
1381 aacaggcttg aacgcagtcc catctcaaat ccttgaaggg cagtgggctg ctcgaagcat
1441 gccaccaagc tttggctatt caatgaaagg agccacagat atagacaaaa atggatatcc
1501 agacttaatt gtaggagctt ttggtgtaga tcgagctatc ttatacaggg ccagaccagt
1561 tatcactgta aatgctggtc ttgaagtgta ccctagcatt ttaaatcaag acaataaaac
1621 ctgctcactg cctggaacag ctctcaaagt ttcctgtttt aatgttaggt tctgcttaaa
1681 ggcagatggc aaaggagtac ttcccaggaa acttaatttc caggtggaac ttcttttgga
1741 taaactcaag caaaagggag caattcgacg agcactgttt ctctacagca ggtccccaag
1801 tcactccaag aacatgacta tttcaagggg gggactgatg cagtgtgagg aattgatagc
1861 gtatctgcgg gatgaatctg aatttagaga caaactcact ccaattacta tttttatgga
1921 atatcggttg gattatagaa cagctgctga tacaacaggc ttgcaaccca ttcttaacca
1981 gttcacgcct gctaacatta gtcgacaggc tcacattcta cttgactgtg gtgaagacaa
2041 tgtctgtaaa cccaagctgg aagtttctgt agatagtgat caaaagaaga tctatattgg
2101 ggatgacaac cctctgacat tgattgttaa ggctcagaat caaggagaag gtgcctacga
2161 agctgagctc atcgtttcca ttccactgca ggctgatttc atcggggttg tccgaaacaa
2221 tgaagcctta gcaagacttt cctgtgcatt taagacagaa aaccaaactc gccaggtggt
2281 atgtgacctt ggaaacccaa tgaaggctgg aactcaactc ttagctggtc ttcgtttcag
2341 tgtgcaccag cagtcagaga tggatacttc tgtgaaattt gacttacaaa tccaaagctc
2401 aaatctattt gacaaagtaa gcccagttgt atctcacaaa gttgatcttg ctgttttagc
2461 tgcagttgag ataagaggag tctcgagtcc tgatcatatc tttcttccga ttccaaactg
2521 ggagcacaag gagaaccctg agactgaaga agatgttggg ccagttgttc agcacatcta
2581 tgagctgaga aacaatggtc caagttcatt cagcaaggca atgctccatc ttcagtggcc
2641 ttacaaatat aataataaca ctctgttgta tatccttcat tatgatattg atggaccaat
2701 gaactgcact tcagatatgg agatcaaccc tttgagaatt aagatctcat ctttgcaaac
2761 aactgaaaag aatgacacgg ttgccgggca aggtgagcgg gaccatctca tcactaagcg
2821 ggatcttgcc ctcagtgaag gagatattca cactttgggt tgtggagttg ctcagtgctt
2881 gaagattgtc tgccaagttg ggagattaga cagaggaaag agtgcaatct tgtacgtaaa
2941 gtcattactg tggactgaga cttttatgaa taaagaaaat cagaatcatt cctattctct
3001 gaagtcgtct gcttcattta atgtcataga gtttccttat aagaatcttc caattgagga
3061 tatcaccaac tccacattgg ttaccactaa tgtcacctgg ggcattcagc cagcgcccat
3121 gcctgtgcct gtgtgggtga tcattttagc agttctagca ggattgttgc tactggctgt
3181 tttggtattt gtaatgtaca ggatgggctt ttttaaacgg gtccggccac ctcaagaaga
3241 acaagaaagg gagcagcttc aacctcatga aaatggtgaa ggaaactcag aaacttaact
3301 gcagttttta agttatgcta catcttgacc cactagaatt agcaacttta ttatagattt
3361 aaactttctt catgaggagt aaaaatccaa ggctttactg ctgatagtgc taattggcat
3421 taaccacaaa atgagaatta tatttgtcaa ccttctcctt ataaataagt tcagacatac
3481 atttaataac atagggtgac ttgtgttttt aggtatttaa ataataaaat ttcaagggat
3541 agtttttatt caatgtatat aagacaggta gtgcctgatt tactacttta tataaaatag
3601 tacctccttc agttactgtt tctgatttaa tgtacggaac tttatttgtt gttgttgttg
3661 ttgttgttgt tgttgtttta aagcagtcca aatttggacc ttagcaatca tgtcttttgt
3721 ataggtactt aatgttaata catattacac tacagtttac ttttcagaat actaaagact
3781 ttataactgc atgaacttgg atttttttaa tcactcatat ggtagaattt tataaacaca
3841 tacatgatac catccaaatt cttgctttta ataacaaagg tacaatattt tgttttagta
3901 tgaaaatctg gtagatccta ttacacttct gtttatatta aatccacaat attttattac
3961 atttttaact tgtataaatt ttaggtcaaa tccttcaagc caacctatac taaaaattag
4021 ttccataatc acaaatggct cttttgtgta attgtttaat ttcacctgaa tatcataatg
4081 cttaaagcca tatggagttg gaaattattt ccaaagcata tttattccat tgttttagtc
4141 tggctattta cagtataaaa aaagcatttt tattaaaata ctgtgtagtt ctttgagata
4201 gttgcttatg catatagtat tacattctta gagtagagca gagtttttag ttagtattaa
4261 tttattttcc tccattcatg tacttttcct tatatttcca aaactgttac tgagaatggg
4321 tcaagatcag tgagaaatct ttacagttga caggaacctg gaccccttac cccaacttta
4381 tgagtaatgc ttggaataaa aactcttaag gcaactcact gatttacttc tagcaatagc
4441 atgatgttac aggaatatta cctctgttta agcaaggtaa tgtgtaaaat cagtctcggc
4501 tgtcagaata acttctaaaa ggtattttta taagcagttc aagttactga aaacctttta
4561 aacctttctg aagttcgtta gtataaatta cttttctagg attattaata aaagccacat
4621 aggtggcaag ttgtagtttt atatggcttt gtagagtggt gaaccttcta gaggaatata
4681 tgatttattc acagttcctc aaggcctggg gatgatgatc agttatacct atttttgtgc
4741 aattacatca tgttgtacat tagaaatgga gagtttaata gctctttaac tgctgtcctc
4801 attaggtaat gataaatatt tcccttaaat aattgactat tttgctgtgt tttaaaaatg
4861 attgaaattt atcttgccat atctcataat ttcatgcaca agttgactga gctaatcttg
4921 agaatatatt cgtaaaatag gagcacattt agttgaggta tacaaggtag gactctagac
4981 aaaaccttct attttagctt tagtgaattt caaaagtaat gggtcttgga gtatagattt
5041 ttattagtag cttgaaagag cttaatcata tgcagtaagt atttttatta ccaataaatt
5101 taaaattttt taagaaaaat atttttatcc tagggccaag tgttgcctgc caccaatcag
5161 taagttagtc tataacaaat tttaccctaa cagttttacc acctagtaac agtcatttct
5221 gaaaatatgt tggatagaaa gtcactcttt ggcaaaagtg ttagaatttg cttttgtgcc
5281 atctattcct tttatggcat ctatcttgaa agtaatcttg tattggagat tgaaagatgc
5341 tgtaatttag aaattaacat gatatcttaa attaccttta tgaaatatag ttttgtataa
5401 tagcatagat tttccttcaa aaaatgaaca tttatatatc tacaaaaata tggagaagag
5461 taatttgaaa gcctactttc tgaagaaaat ggtgggattt tttttatcat gattaaatat
5521 caaaaaattg ccctatgaaa actttaaatc tctaaaacat ttgaaatact accatatttg
5581 tgatttattg agaataaaaa tccattttga aatgtaaaat ttttatgatc tgattcagtt
5641 ttaagaaaac atgaatgaac tagaagatat taaaaacatt tgacattggt aagaaatatt
5701 gatactgata ttgattttta tataggtatt tatttcagaa ttgatatttt gagaaaaata
5761 catgtgagtc attttttctg tttctctttt ctcttaacga ttatcactgt aattctgaat
5821 ctgaaaggta aaacaattag tcaaaatatt attgccatca ttctacctgt gttatgaaac
5881 tacttattca tagttaattc tcattaacac ttacatttcc ataaagaaaa ctcaagtatt
5941 aataaaagag actttactgg cttaagaggg ctgtgaaaga tttttgatag tgaatcatga
6001 ccctaaggga gagatttgtg tgataaaagt attgtatata atagatcagc gatttttgta
6061 aggcaaacag aatttgtaag ttggcagatc ttcctaagtt gcaaaatgta atgatgagct
6121 tggtggagaa gaatgagtcg ttcttggaat acctatgtgc agccactacc catctcaatg
6181 tcaccttgtt tgcattcttg gatagcttgt atatgtagta gtttgatgaa taatttaaag
6241 aaaaacacct aaaatttgaa aaatgattgt aggatcaaaa aaggcagatg aaattactta
6301 atactcagtg ttttggagag tattcctttt agtttgttgg ttggctggtt tgaacgatag
6361 aaatatgcag catgcaatat atgcttatat ttcattttaa tttctgatat ataatgaact
6421 tcttgggaga ggtactgaat ctttgatgtt ttttgtcatt gttctcaagt gcaatataac
6481 aatgtaacca aatctagata atttcaaagt tgtcattaat ttagtaagcc taatataaac
6541 aaatatttgt attatttttg ttagcaggaa agagtgatta agtgaggtta tttaccccta
6601 aatggtccat tctgcattgt atttcaggct ggaaatgaat tattctttac cagttttgaa
6661 acactttgaa atatcctaag gtaacttgga agctgtgtag tatatcaaat taatttgcta
6721 cctaataaca tagaaagtaa atatctttgt ggtcacccac attgggtgag acagaaaatg
6781 aatctgttct aaaatttgta atttgctaac ttgatttgag ttagtgaaaa ctggtacagt
6841 gttctgcttg atttacaaca tgtaacttgt gactgtacaa taaacataag catatggt
//