LOCUS AB209891 6259 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for adenosine deaminase, RNA-specific isoform
ADAR-a variant protein.
ACCESSION AB209891
VERSION AB209891.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6259)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..6259
/clone="eg01092"
/db_xref="H-InvDB:HIT000329826"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003002602"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="aorta endothelial cell"
CDS <1..3736
/codon_start=2
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="adenosine deaminase, RNA-specific isoform
ADAR-a variant"
/protein_id="BAD93128.1"
/translation="GGGSRPHWQPPGVRPCPEEVQDPGYSLSGYYTHPFQGYEHRQLR
YQQPGPGSSPSSFLLKQIEFLKGQLPEAPVIGKQTPSLPPSLPGLRPRFPVLLASSTR
GRQVDIRGVPRGVHLGSQGLQRGFQHPSPRGRSLPQRGVDCLSSHFQELSIYQDQEQR
ILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVS
TQAWNQHSGVVRPDGHSQGAPNSDPSLEPEDRNSTSVSEDLLEPFIAVSAQAWNQHSG
VVRPDSHSQGSPNSDPGLEPEDSNSTSALEDPLEFLDMAEIKEKICDYLFNVSDSSAL
NLAKNIGLTKARDINAVLIDMERQGDVYRQGTTPPIWHLTDKKRERMQIKRNTNSVPE
TAPAAIPETRRNAEFLTCNIPTSNASNNMVTTEKVENGQEPVIKLENRQEARPEPARL
KPPVHYNGPSKAGYVDFENGQWATDDIPDDLNSIRAAPGEFRAIMEMPSFYSHGLPRC
SPYKKLTECQLKNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPP
AEAGSKKVAKQDAAMKAMTILLEEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSA
TSFFSGKSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPS
KKVAKQMAAEEAMKALHGEATNSMASDNQPEGMISESLDNLESMMPNKVRKIGELVRY
LNTNPVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQG
KQEAADAALRVLIGENEKAERMGFTEVTPVTGASLRRTMLLLSRSPEAQPKTLPLTGS
TFHDQIAMLSHRCFNTLTNSFQPSLLGRKILAAIIMKKDSEDMGVVVSLGTGNRCVKG
DSLSLKGETVNDCHAEIISRRGFIRFLYSELMKYNSQTAKDSIFEPAKGGEKLQIKKT
VSFHLYISTAPCGDGALFDKSCSDRAMESTESRHYPVFENPKQGKLRTKVENGEGTIP
VESSDIVPTWDGIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPIYLKSVTLGYL
FSQGHLTRAICCRVTRDGSAFEDGLRHPFIVNHPKVGRVSIYDSKRQSGKTKETSVNW
CLADGYDLEILDGTRGTVDGPRNELSRVSKKNIFLLFKKLCSFRYRRDLLRLSYGEAK
KAARDYETAKNYFKKGLKDMGYGNWISKPQEEKNFYLCPV"
BASE COUNT 1637 a 1592 c 1531 g 1499 t
ORIGIN
1 ggggggaggg tcgcggccgc actggcagcc tccgggtgtc cggccgtgtc ccgaggaagt
61 gcaagacccg gggtattccc tcagcggata ctacacccat ccatttcaag gctatgagca
121 cagacagctc agataccagc agcctgggcc aggatcttcc cccagtagtt tcctgcttaa
181 gcaaatagaa tttctcaagg ggcagctccc agaagcaccg gtgattggaa agcagacacc
241 gtcactgcca ccttccctcc caggactccg gccaaggttt ccagtactac ttgcctccag
301 taccagaggc aggcaagtgg acatcagggg tgtccccagg ggcgtgcatc tcggaagtca
361 ggggctccag agagggttcc agcatccttc accacgtggc aggagtctgc cacagagagg
421 tgttgattgc ctttcctcac atttccagga actgagtatc taccaagatc aggaacaaag
481 gatcttaaag ttcctggaag agcttgggga agggaaggcc accacagcac atgatctgtc
541 tgggaaactt gggactccga agaaagaaat caatcgagtt ttatactccc tggcaaagaa
601 gggcaagcta cagaaagagg caggaacacc ccctttgtgg aaaatcgcgg tctccactca
661 ggcttggaac cagcacagcg gagtggtaag accagacggt catagccaag gagccccaaa
721 ctcagacccg agtttggaac cggaagacag aaactccaca tctgtctcag aagatcttct
781 tgagcctttt attgcagtct cagctcaggc ttggaaccag cacagcggag tggtaagacc
841 agacagtcat agccaaggat ccccaaactc agacccaggt ttggaacctg aagacagcaa
901 ctccacatct gccttggaag atcctcttga gtttttagac atggccgaga tcaaggagaa
961 aatctgcgac tatctcttca atgtgtctga ctcctctgcc ctgaatttgg ctaaaaatat
1021 tggccttacc aaggcccgag atataaatgc tgtgctaatt gacatggaaa ggcaggggga
1081 tgtctataga caagggacaa cccctcccat atggcatttg acagacaaga agcgagagag
1141 gatgcaaatc aagagaaata cgaacagtgt tcctgaaacc gctccagctg caatccctga
1201 gaccagaaga aacgcagagt tcctcacctg taatataccc acatcaaatg cctcaaataa
1261 catggtaacc acagaaaaag tggagaatgg gcaggaacct gtcataaagt tagaaaacag
1321 gcaagaggcc agaccagaac cagcaagact gaaaccacct gttcattaca atggcccctc
1381 aaaagcaggg tatgttgact ttgaaaatgg ccagtgggcc acagatgaca tcccagatga
1441 cttgaatagt atccgcgcag caccaggtga gtttcgagcc atcatggaga tgccctcctt
1501 ctacagtcat ggcttgccac ggtgttcacc ctacaagaaa ctgacagagt gccagctgaa
1561 gaaccccatc agcgggctgt tagaatatgc ccagttcgct agtcaaacct gtgagttcaa
1621 catgatagag cagagtggac caccccatga acctcgattt aaattccagg ttgtcatcaa
1681 tggccgagag tttcccccag ctgaagctgg aagcaagaaa gtggccaagc aggatgcagc
1741 tatgaaagcc atgacaattc tgctagagga agccaaagcc aaggacagtg gaaaatcaga
1801 agaatcatcc cactattcca cagagaaaga atcagagaag actgcagagt cccagacccc
1861 caccccttca gccacatcct tcttttctgg gaagagcccc gtcaccacac tgcttgagtg
1921 tatgcacaaa ttggggaact cctgcgaatt ccgtctcctg tccaaagaag gccctgccca
1981 tgaacccaag ttccaatact gtgttgcagt gggagcccaa actttcccca gtgtgagtgc
2041 tcccagcaag aaagtggcaa agcagatggc cgcagaggaa gccatgaagg ccctgcatgg
2101 ggaggcgacc aactccatgg cttctgataa ccagcctgaa ggtatgatct cagagtcact
2161 tgataacttg gaatccatga tgcccaacaa ggtcaggaag attggcgagc tcgtgagata
2221 cctgaacacc aaccctgtgg gtggcctttt ggagtacgcc cgctcccatg gctttgctgc
2281 tgaattcaag ttggtcgacc agtccggacc tcctcacgag cccaagttcg tttaccaagc
2341 aaaagttggg ggtcgctggt tcccagccgt ctgcgcacac agcaagaagc aaggcaagca
2401 ggaagcagca gatgcggctc tccgtgtctt gattggggag aacgagaagg cagaacgcat
2461 gggtttcaca gaggtaaccc cagtgacagg ggccagtctc agaagaacta tgctcctcct
2521 ctcaaggtcc ccagaagcac agccaaagac actccctctc actggcagca ccttccatga
2581 ccagatagcc atgctgagcc accggtgctt caacactctg actaacagct tccagccctc
2641 cttgctcggc cgcaagattc tggccgccat cattatgaaa aaagactctg aggacatggg
2701 tgtcgtcgtc agcttgggaa cagggaatcg ctgtgtgaaa ggagattctc tcagcctaaa
2761 aggagaaact gtcaatgact gccatgcaga aataatctcc cggagaggct tcatcaggtt
2821 tctctacagt gagttaatga aatacaactc ccagactgcg aaggatagta tatttgaacc
2881 tgctaaggga ggagaaaagc tccaaataaa aaagactgtg tcattccatc tgtatatcag
2941 cactgctccg tgtggagatg gcgccctctt tgacaagtcc tgcagcgacc gtgctatgga
3001 aagcacagaa tcccgccact accctgtctt cgagaatccc aaacaaggaa agctccgcac
3061 caaggtggag aacggagaag gcacaatccc tgtggaatcc agtgacattg tgcctacgtg
3121 ggatggcatt cggctcgggg agagactccg taccatgtcc tgtagtgaca aaatcctacg
3181 ctggaacgtg ctgggcctgc aaggggcact gttgacccac ttcctgcagc ccatttatct
3241 caaatctgtc acattgggtt accttttcag ccaagggcat ctgacccgtg ctatttgctg
3301 tcgtgtgaca agagatggga gtgcatttga ggatggacta cgacatccct ttattgtcaa
3361 ccaccccaag gttggcagag tcagcatata tgattccaaa aggcaatccg ggaagactaa
3421 ggagacaagc gtcaactggt gtctggctga tggctatgac ctggagatcc tggacggtac
3481 cagaggcact gtggatgggc cacggaatga attgtcccgg gtctccaaaa agaacatttt
3541 tcttctattt aagaagctct gctccttccg ttaccgcagg gatctactga gactctccta
3601 tggtgaggcc aagaaagctg cccgtgacta cgagacggcc aagaactact tcaaaaaagg
3661 cctgaaggat atgggctatg ggaactggat tagcaaaccc caggaggaaa agaactttta
3721 tctctgccca gtatagtatg ctccagtgac agatggatta gggtgtgtca tactagggtg
3781 tgagagaggt aggtcgtagc attcctcatc acatggtcag gggatttttt tttctccttt
3841 tttttttctt tttaagccat aattggtgat actgaaaact ttgggttccc atttatcctg
3901 ctttctttgg gattgctagg caaggtctgg ccaggccccc cttttttccc ccaagtgaag
3961 aggcagaaac ctaagaagtt atcttttctt tctacccaaa gcatacatag tcactgagca
4021 cctgcggtcc atttcctctt aaaagttttg ttttgatttg tttccatttc ctttcccttt
4081 gtgtttgcta cactgacctc ttgcggtctt gattaggttt cagtcaactc tggatcatgt
4141 cagggactga taatttcatt tgtggattac gcagacccct ctacttcccc tctttccctt
4201 ctgagattct ttccttgtga tctgaatgtc tccttttccc cctcagaggg caaagaggtg
4261 aacataaagg atttggtgaa acatttgtaa gggtaggagt tgaaaactgc agttcccagt
4321 gccacggaag tgtgattgga gcctgcagat aatgctcagc catcctccca tcctgcactt
4381 tagccagctg cagggcgggc aaggcaagga aagctgcttc cctggaagtg tatcactttc
4441 tccggcagct gggaagtcta gaaccagcca gactgggtta agggagctgc tcaagcaata
4501 gcagaggttt cacccggcag gatgacacag accacttccc agggagcacg ggcatgcctt
4561 ggaatattgc caagcttcca gctgcctctt ctcttaaagc attcctagga atattttccc
4621 cgccaatgct gggcgtacac cctagccaac gggacaaatc ctagagggta taaaatcatc
4681 tctgctcaga taatcatgac ttagcaagaa taagggcaaa aaatcctgtt ggcttaacgt
4741 cactgttcca cctggtgtaa tatctctcat gacagtgaca ccaagggaag ttgactaagt
4801 cacatgtaaa ttaggagtgt tttaaagaat gccatagatg ttgattctta actgctacag
4861 ataacctgta attgagcaga tttaaaattc aggcatactt ttccatttat ccaagtgctt
4921 tcatttttcc agatggcttc agaagtaggc tcgtgggcag ggcgcagacc tgatctttat
4981 agggttgaca tagaaagcag tagttgtggg tgaaagggca ggttgtcttc aaactctgtg
5041 aggtagaatc ctttgtctat acctccatga acattgactc gtgtgttcag agcctttggc
5101 ctctctgtgg agtctggctc tctggctcct gtgcattctt tgaatagtca ctcgtaaaaa
5161 ctgtcagtgc ttgaaactgt ttcctttact catgttgaag ggactttgtt ggcttttaga
5221 gtgttggtca tgactccaag agcagagcag ggaagagccc aagcatagac ttggtgccgt
5281 ggtgaaggct gcagtccagt tttgtgatgc tgcttttacg tgtccctcga taacagtcag
5341 ctagacacac tcaggaggac tactgaggct ctgcgacctt caggagctga gcctgcctct
5401 ctcctttaga tgacagacct tcatctggga acgtgctgag ccagcaccct cagatgattt
5461 ccctccaaac tgctgactag gtcatcctct gtctggtaga gacattcaca tctttgcttt
5521 tattctgtgc tctctgtact tttgaccaaa aattgaccaa agtaagaaaa tgcaagttct
5581 aaaaatagac taaggatgcc tttgcagaac accaaagcat cccaaggaac tggtagggaa
5641 gtggcgcctg tctcctggag tggaagaggc ctgctccctg gctctgggtc tgctgggggc
5701 acagtaaatc agtcttggca cccacatcca gggcagagag gtctgtggtt ctcagcatca
5761 gaaggcagcg cagcccctct cctcttcagg ctacagggtt gtcacctgct gagtcctcag
5821 gttgtttggc ctctctggtc catcttgggc attaggttct ccagcagagc tctggccagc
5881 tgcctcttct ttaactggga acacaggctc tcacaagatc agaaccccca ctcaccccca
5941 agatcttatc tagcaagcct gtagtattca gtttctgttg taggaagaga gcgaggcatc
6001 cctgaattcc acgcatctgc tggaaacgag ccgtgtcaga tcgcacatcc ctgcgccccc
6061 atgcccccat gcccctctga gtcacacagg acagaggagg cagagcttct gcccactgtt
6121 atcttcactt tctttgtcca gtcttttgtt tttaataagc agtgaccctc cctactcttc
6181 tttttaatga tttttgtagt tgatttgtct gaactgtggc tactgtgcat tccttgaata
6241 atcacttgta aaaattgtc
//