LOCUS AB209871 6294 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for protein tyrosine phosphatase, receptor type,
G precursor variant protein.
ACCESSION AB209871
VERSION AB209871.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6294)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..6294
/clone="ef03938"
/db_xref="H-InvDB:HIT000329806"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003002544"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="aorta endothelial cell"
CDS <111..4703
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="protein tyrosine phosphatase, receptor type, G
precursor variant"
/protein_id="BAD93108.1"
/translation="TESSLSPPRGSSPAWLCVPGHFLRFSGGRSAASRIPRGLGPPSA
GGPWSGRAGEAPRLSGGSHGGKNLFNKFTSLLSSFRCAFSDMRRLLEPCWWILFLKIT
SSVLHYVVCFPALTEGYVGALHENRHGSAVQIRRRKASGDPYWAYSGAYGPEHWVTSS
VSCGGRHQSPIDILDQYARVGEEYQELQLDGFDNESSNKTWMKNTGKTVAILLKDDYF
VSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFYNPDDFDSFQTAI
SENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSY
YRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFR
PQQRLHDRVVSKSAVRDSWNHDMTDFLENPLGTEASKVCSSPPIHMKVQPLNQTALQV
SWSQPETIYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDLKATISHVSPDSLYLFRV
QAVCRNDMRSDFSQTMLFQANTTRIFQGTRIVKTGVPTASPASSADMAPISSGSSTWT
SSGIPFSFVSMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLP
TAASASKQAARPVLATTEALASPGPDGDSSPTKDGEGTEEGEKDEKSESEDGEREHEE
DGEKDSEKKEKSGVTHAAEERNQTEPSPTPSSPNRTAEGGHQTIPGHEQDHTAVPTDQ
TGGRRDAGPGLDPDMVTSTQVPPTATEEQYAGSDPKRPEMPSKKPMSRGDRFSEDSRF
ITVNPAEKNTSGMISRPAPGRMEWIIPLIVVSALTFVCLILLIAVLVYWRGCNKIKSK
GFPRRFREVPSSGERGEKGSRKCFQTAHFYVEDSSSPRVVPNESIPIIPIPDDMEAIP
VKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYD
HSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTG
IIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKK
GQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCS
AGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEA
ILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKE
KNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFW
RMIWDHNAQIIVMLPDNQSLAEDEFVYWPSREESMNCEAFTVTLISKDRLCLSNEEQI
IIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHD
EYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLS
LVSTKENGNGPMTVDKNGAVLIADESDPAESMESLV"
BASE COUNT 1734 a 1472 c 1475 g 1613 t
ORIGIN
1 atcctcggct gctcgccgcc gccgcccgcg gtccctgcct gccccaggcc cggggcatcg
61 ccgccggccg ccgactccgc gccctgcccg atcggctctc tcctttttaa acggaaagca
121 gcctttctcc gccgagagga tcgtccccag cgtggctctg cgttcccggt cactttttga
181 gattttccgg ggggcgctcg gcggcttccc ggattccaag gggactcggg ccgccgagcg
241 cggggggccc gtggagcggg cgagccgggg aagcgccccg gcttagcgga ggctcgcacg
301 gaggcaagaa cttattcaac aagtttacct ccctgctttc ctcttttcga tgtgcgtttt
361 cggacatgcg gaggttactg gaaccgtgtt ggtggatttt gttcctgaaa atcaccagtt
421 ccgtgctcca ttatgtcgtg tgcttccccg cgttgacaga aggctacgtt ggggccctgc
481 acgagaatag acacggcagc gcagtgcaga tccgcaggcg caaggcttca ggcgacccgt
541 actgggccta ctctggtgcc tatggtcctg agcactgggt cacgtctagt gtcagctgtg
601 ggggccgtca ccagtctcct attgacattt tagaccagta tgcgcgtgtt ggggaagaat
661 accaggaact gcaactcgat ggcttcgaca atgagtcttc taacaaaacc tggatgaaaa
721 acacagggaa aacagtcgcc atccttctga aagacgacta ttttgtcagt ggagctggtc
781 tacctggcag attcaaagct gagaaggtgg aatttcactg gggccacagc aatggctcag
841 cgggctctga acacagcatc aatggcagga ggtttcctgt tgagatgcag attttctttt
901 acaatccaga tgactttgac agctttcaaa ccgcaatttc tgagaacaga ataatcggag
961 ccatggccat attttttcaa gtcagtccga gggacaattc tgcactggat cctattatcc
1021 acgggttgaa gggtgtcgta catcatgaga aggagacctt tctggatcct ttcgtcctcc
1081 gggacctcct gcctgcatcc ctgggcagct attatcggta cacaggttcc ttgaccacac
1141 caccgtgtag cgaaatagtg gagtggatag tcttccggag acccgtcccc atctcttacc
1201 atcagcttga ggctttttat tccatcttca ccacggagca gcaagaccat gtcaagtcgg
1261 tggagtatct gagaaataac tttcgaccac agcagcgtct gcatgacagg gtggtgtcca
1321 agtccgccgt ccgtgactcc tggaaccacg acatgacaga cttcttagaa aacccactgg
1381 ggacagaagc ctctaaagtt tgcagctctc cacccatcca catgaaggtg cagcctctga
1441 accagacggc actgcaggtg tcctggagcc agccggagac tatctaccac ccacccatca
1501 tgaactacat gatctcctac agctggacca agaatgagga cgagaaggag aagacgttta
1561 caaaggacag cgacaaagac ttgaaagcca ccattagcca tgtctcaccc gatagccttt
1621 acctgttccg agtccaggcc gtgtgtcgga acgacatgcg cagcgacttt agccagacga
1681 tgctgtttca agctaatacc actcgaatat tccaagggac cagaatagtg aaaacaggag
1741 tgcccacagc gtctcctgcc tcttcagccg acatggcccc catcagctcg gggtcttcta
1801 cctggacgtc ctctggcatc ccattctcat ttgtttccat ggcaactggg atgggcccct
1861 cctccagtgg cagccaggcc acagtggcct cggtggtcac cagcacgctg ctcgccggcc
1921 tggggttcgg cggtggtggc atctcctctt tccccagcac tgtgtggccc acgcgcctcc
1981 cgacggccgc ctcagccagc aagcaggcgg ctaggccagt cctagccacc acagaggcct
2041 tggcttctcc agggcccgat ggtgattcgt caccaaccaa ggacggcgag ggcaccgagg
2101 aaggagagaa ggatgagaaa agcgagagtg aggatgggga gcgggagcac gaggaggatg
2161 gagagaagga ctccgaaaag aaggagaaga gtggggtgac ccacgctgcc gaggagcgga
2221 atcagacgga gcccagcccc acaccctcgt ctcctaacag gactgccgag ggagggcatc
2281 agactatacc tgggcatgag caggatcaca ctgccgtccc cacagaccag acgggcggaa
2341 ggagggatgc cggcccaggc ctggaccccg acatggtcac ctccacccaa gtgcccccca
2401 ccgccacaga ggagcagtat gcagggagtg atcccaagag gcccgaaatg ccatctaaaa
2461 agcctatgtc ccgcggggac cgattttctg aagacagcag atttatcact gttaatccag
2521 cggaaaaaaa cacctctgga atgataagcc gccctgctcc agggaggatg gagtggatca
2581 tccctctgat tgtggtatca gccttgacct tcgtgtgcct catccttctc attgctgtgc
2641 tcgtttactg gagagggtgt aacaaaataa agtccaaggg ctttcccaga cgtttccgtg
2701 aagtgccttc ttctggggag agaggagaga aggggagcag aaaatgtttt cagactgctc
2761 atttctatgt ggaagacagc agttcacctc gagtggtccc taatgaaagt attcctatta
2821 ttcctattcc ggatgacatg gaagccattc ctgtcaaaca gtttgtcaaa cacatcggtg
2881 agctctattc taataaccag catgggttct ctgaggattt tgaggaagtc cagcgctgta
2941 ctgctgatat gaacatcact gcagagcatt ccaatcatcc agaaaacaag cacaaaaaca
3001 gatacatcaa cattttagca tatgatcaca gtagggtgaa gttaagacct ttaccaggaa
3061 aagactctaa gcacagcgac tacattaatg caaactatgt tgatggttac aacaaagcaa
3121 aagcctacat tgccacccaa ggacctttga agtctacatt tgaagatttc tggaggatga
3181 tttgggaaca aaacactgga atcattgtga tgattacgaa ccttgtggaa aaaggaagac
3241 gaaaatgtga tcagtattgg ccaacagaga acagtgagga atatggaaac attattgtca
3301 cgctgaagag cacaaaaata catgcctgct acactgttcg tcgtttttca atcagaaata
3361 caaaagtgaa aaagggtcag aagggaaatc ccaagggtcg tcagaatgaa agggtagtga
3421 tccagtatca ctatacacag tggcctgaca tgggagttcc cgagtatgcc cttccagtac
3481 tgactttcgt gaggagatcc tcagcagctc ggatgccaga aacgggccct gtgttggtgc
3541 actgcagtgc tggtgtgggc agaacaggca cctatattgt aatagacagc atgctgcaac
3601 agataaaaga caaaagcaca gttaacgtcc tgggattcct gaagcatatc aggacacagc
3661 gtaactacct cgtccagact gaggagcagt acattttcat ccatgatgcc ttgttggaag
3721 ccattcttgg aaaggagact gaagtatctt caaatcagct gcacagctat gttaacagca
3781 tccttatacc aggagtagga ggaaagacac gactggaaaa gcaattcaag ctggtcacac
3841 agtgtaatgc aaaatatgtg gaatgtttca gtgctcagaa agagtgtaac aaagaaaaga
3901 acagaaactc ttcagttgtg ccatctgagc gtgctcgagt gggtcttgca ccattgcctg
3961 gaatgaaagg aacagattac attaatgctt cttatatcat gggctattat aggagcaatg
4021 aatttattat aactcagcat cctctgccac atactacgaa agatttctgg cgaatgattt
4081 gggatcataa cgcacagatc attgtcatgc tgccagacaa ccagagcttg gcagaagatg
4141 agtttgtgta ctggccaagt cgagaagaat ccatgaactg tgaggccttt accgtcaccc
4201 ttatcagcaa agacagactg tgcctctcta atgaagaaca aattatcatc catgacttta
4261 tccttgaagc tacacaggat gactatgtct tagaagttcg gcactttcag tgtcccaaat
4321 ggcctaaccc agatgccccc ataagtagta cctttgaact tatcaacgtc atcaaggaag
4381 aggccttaac aagggatggt cccaccattg ttcatgatga gtatggagca gtttcagcag
4441 gaatgttatg tgcccttacc accctgtccc agcaactgga gaatgaaaat gctgtggatg
4501 ttttccaggt tgcaaaaatg atcaatctta tgaggcctgg agtattcaca gacattgaac
4561 aataccagtt catctataaa gcaatgctta gcttggtcag cactaaagaa aatggaaatg
4621 gtcccatgac agtagacaaa aatggtgctg ttcttattgc agatgaatca gaccctgctg
4681 agagcatgga gtccctagtg tgactggaat cctgaaaggg cacttaattt gtaaacttct
4741 gaagactgag aacttttttg aggccttttt tgccagactc taggttatac aataacccag
4801 ttactttttt acactgataa aagttttgat atttattttt tgccatttta tgtcttaatg
4861 gtatcctact gagcatttgc acctctgttc atttcacaca gtgaaacgca attttaccta
4921 gtttgcacta tatgatcagt gttactgcct ataatcttat acaacagcaa accctgatgt
4981 gacattccat gacgacatac atgctacttt tttttagttc aatacagtga aggtctttgt
5041 tatgacagtg aatattgctt ttattattat tattgctgaa gtggttgcat tctactagca
5101 ggcaatgctg tacttttctt cagtcctcct ctccttttta ttttaggcac tgttcaatac
5161 tgtatgcctt ctgtatttta atggagtgga tagcattgtt ttcttttaca gactagcagg
5221 ctactgggac ctaaaaaggt ctgttaatgt catggccttg aaacagttcc atttatgctg
5281 gttaagagat cccttaagaa gttagaaggc ttaagaactg cttcatgtga acatccctta
5341 ttagttacaa agttatattc acagtttttt aaaaatgtgt caaaataaag gataactctg
5401 tattacagct ttcacagtag ctatgtggac aatgtgttat ttccattttg actctctaaa
5461 atagctacat cctaaaatca gggctatctt taacaatagc aagatagcaa tattatatac
5521 aactcagtta tgagaccctt tagttattct ccattaatgc ttcttagttt gtaataccat
5581 acctcacagt aggtagaaga atgaaaactt ctgcaggtgt gtaattttga aactagtcct
5641 ctaaaaattc cctattactc ctatagcaat ctaataaaaa ctacctacat agttactgtt
5701 ttctttcctt ctttgccaaa tgttttataa taaatctctt aattacatac atttttctac
5761 ttaagattaa attggaaata ctgtattagc aaaagtcttg ggactatcta aactcccaca
5821 catagataaa tctgatttgg agagagaaat ttaaaatatt taattaaagg tgatacccac
5881 attttcaagt ttttaaaaga gggagatggc tttgtatgct tttgtgtagt ttagaacaga
5941 tacacattag taaaagatac caataatcat tagagctcaa ggaagttatt aggtgcagcc
6001 tctggagcca tactcacgct gcagtgcata atgggaaaat taggagcatt aataagaaat
6061 ttcagtagtg tttgtaagga aaataagcta cttactgaga tctgtttctt ctattgcatg
6121 tttgcttttg agggacagct tctgtcaaaa gtgaaatcat caccagaact gggcctgtta
6181 ggaagaatag ggttttattt actttttatg tcaattaact tcaacaaaaa ggccacgctg
6241 gctgctgtca tgccatctgg gtatgcatta aacattaatg atgatcagca ctga
//