LOCUS AB209775 2452 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for sphingomyelin phosphodiesterase 1, acid
lysosomal isoform 1 precursor variant protein.
ACCESSION AB209775
VERSION AB209775.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2452)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..2452
/clone="bm01791"
/db_xref="H-InvDB:HIT000329710"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003002202"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <70..2064
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="sphingomyelin phosphodiesterase 1, acid
lysosomal isoform 1 precursor variant"
/protein_id="BAD93012.1"
/translation="SGVPGAARGPEGWLGSRPGGTGQTNQPRVGSATMPRYGASLRQS
CPRSGREQGQDGTAGAPGLLWMGLALALALALALALALSDSRVLWAPAEAHPLSPQGH
PARLHRIVPRLRDVFGWGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKI
APPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPK
PPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGA
GYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVWHQTRQDQLRALTTV
TALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEA
LRTLRIGGFYALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAED
RGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLS
RPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIP
HWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGTPCR
LATLCAQLSARADSPALCRHLMPDGSLPEAQSLWPRPLFC"
BASE COUNT 470 a 768 c 710 g 504 t
ORIGIN
1 ggaagaggaa ggggcggagc tgctttgcgg ccggccgcgg agcagtcagc cgactacaga
61 gaagggtaat cgggtgtccc cggcgccgcc cggggccctg agggctggct agggtccagg
121 ccggggggga cgggacagac gaaccagccc cgtgtaggaa gcgcgacaat gccccgctac
181 ggagcgtcac tccgccagag ctgccccagg tccggccggg agcagggaca agacgggacc
241 gccggagccc ccggactcct ttggatgggc ctggcgctgg cgctggcgct ggcgctggcg
301 ctggcgctgg ctctgtctga ctctcgggtt ctctgggctc cggcagaggc tcaccctctt
361 tctccccaag gccatcctgc caggttacat cgcatagtgc cccggctccg agatgtcttt
421 gggtggggga acctcacctg cccaatctgc aaaggtctat tcaccgccat caacctcggg
481 ctgaagaagg aacccaatgt ggctcgcgtg ggctccgtgg ccatcaagct gtgcaatctg
541 ctgaagatag caccacctgc cgtgtgccaa tccattgtcc acctctttga ggatgacatg
601 gtggaggtgt ggagacgctc agtgctgagc ccatctgagg cctgtggcct gctcctgggc
661 tccacctgtg ggcactggga cattttctca tcttggaaca tctctttgcc tactgtgccg
721 aagccgcccc ccaaaccccc tagcccccca gccccaggtg cccctgtcag ccgcatcctc
781 ttcctcactg acctgcactg ggatcatgac tacctggagg gcacggaccc tgactgtgca
841 gacccactgt gctgccgccg gggttctggc ctgccgcccg catcccggcc aggtgccgga
901 tactggggcg aatacagcaa gtgtgacctg cccctgagga ccctggagag cctgttgagt
961 gggctgggcc cagccggccc ttttgatatg gtgtactgga caggagacat ccccgcacat
1021 gatgtctggc accagactcg tcaggaccaa ctgcgggccc tgaccaccgt cacagcactt
1081 gtgaggaagt tcctggggcc agtgccagtg taccctgctg tgggtaacca tgaaagcaca
1141 cctgtcaata gcttccctcc ccccttcatt gagggcaacc actcctcccg ctggctctat
1201 gaagcgatgg ccaaggcttg ggagccctgg ctgcctgccg aagccctgcg caccctcaga
1261 attggggggt tctatgctct ttccccatac cccggtctcc gcctcatctc tctcaatatg
1321 aatttttgtt cccgtgagaa cttctggctc ttgatcaact ccacggatcc cgcaggacag
1381 ctccagtggc tggtggggga gcttcaggct gctgaggatc gaggagacaa agtgcatata
1441 attggccaca ttcccccagg gcactgtctg aagagctgga gctggaatta ttaccgaatt
1501 gtagccaggt atgagaacac cctggctgct cagttctttg gccacactca tgtggatgaa
1561 tttgaggtct tctatgatga agagactctg agccggccgc tggctgtagc cttcctggca
1621 cccagtgcaa ctacctacat cggccttaat cctggttacc gtgtgtacca aatagatgga
1681 aactactccg ggagctctca cgtggtcctg gaccatgaga cctacatcct gaatctgacc
1741 caggcaaaca taccgggagc cataccgcac tggcagcttc tctacagggc tcgagaaacc
1801 tatgggctgc ccaacacact gcctaccgcc tggcacaacc tggtatatcg catgcggggc
1861 gacatgcaac ttttccagac cttctggttt ctctaccata agggccaccc accctcggag
1921 ccctgtggca cgccctgccg tctggctact ctttgtgccc agctctctgc ccgtgctgac
1981 agccctgctc tgtgccgcca cctgatgcca gatgggagcc tcccagaggc ccagagcctg
2041 tggccaaggc cactgttttg ctagggcccc agggcccaca tttgggaaag ttcttgatgt
2101 aggaaagggt gaaaaagccc aaatgctgct gtggttcaac caggcaagat catccggtga
2161 aagaaccagt ccctgggccc caaggatgcc ggggaaacag gaccttctcc tttcctggag
2221 ctggtttagc tggatatggg agggggtttg gctgcctgtg cccaggagct agactgcctt
2281 gaggctgctg tcctttcaca gccatggagt agaggcctaa gttgacactg ccctgggcag
2341 acaagacagg agctgtcgcc ccaggcctgt gctgcccagc caggaaccct gtactgctgc
2401 tgcgacctga tgctgccagt ctgttaaaat aaagataaga gacttggact cc
//