LOCUS AB209757 5189 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for serine palmitoyltransferase subunit 1
isoform a variant protein.
ACCESSION AB209757
VERSION AB209757.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5189)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..5189
/clone="bh00260"
/db_xref="H-InvDB:HIT000329692"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003002131"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1..790
/codon_start=2
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="serine palmitoyltransferase subunit 1 isoform a
variant"
/protein_id="BAD92994.1"
/translation="EQWVLVEMVQALYEAPAYHLILEGILILWIIRLLFSKTYKLQER
SDLTVKEKEELIEEWQPEPLVPPVPKDHPALNYNIVSGPPSHKTVVNGKECINFASFN
FLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDLLAKFMKTEEAIIYS
YGFATIASAIPAYSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHNDMADLERLLKE
QEIEDQKNPRKARVTRRFIVVEGLYMNTGTICPLPELVSNHVQL"
BASE COUNT 1288 a 1004 c 1062 g 1835 t
ORIGIN
1 ggagcagtgg gttctggtgg agatggtaca ggcgctttac gaggctcctg cttaccatct
61 tattttggaa gggattctga tcctctggat aatcagactt cttttctcta agacttacaa
121 attacaagaa cgatctgatc ttacagtcaa ggaaaaagaa gaactgattg aagagtggca
181 accagaacct cttgttcctc ctgtcccaaa agaccatcct gctctcaact acaacatcgt
241 ttcaggccct ccaagccaca aaactgtggt gaatggaaaa gaatgtataa acttcgcctc
301 atttaatttt cttggattgt tggataaccc tagggttaag gcagcagctt tagcatctct
361 aaagaagtat ggcgtgggga cttgtggacc cagaggattt tatggcacat ttgatgttca
421 tttggatttg gaagacctcc tggcaaaatt tatgaagaca gaagaagcca ttatatactc
481 atatggattt gccaccatag ccagtgctat tcctgcttac tctaaaagag gggacattgt
541 ttttgtagat agagctgcct gctttgctat tcagaaagga ttacaggcat cccgtagtga
601 cattaagtta tttaagcata atgacatggc tgacctcgag cgactactaa aagaacaaga
661 gatcgaagat caaaagaatc ctcgcaaggc tcgtgtaact cggcgtttca ttgtagtaga
721 aggattgtat atgaatactg gaactatttg tcctcttcca gaattggtaa gcaaccatgt
781 tcagctgtaa ttttaatatt tggactattt gacagatgtg ccttttgttt atgaccgctt
841 ttagtgtata acgtctgcgt tgctttgcgc attaggcctc ataagcatat tttgctcaga
901 tcagggaaga agaacaacac tgaatgccag tgctggcctt caaagagtaa tcaagactgc
961 tctgttgccc aggctggagt gcagtggtgt gaacacagct cactgcagcc ttaccctcct
1021 gggctcaagt gatccttcca ccttagcttt ctgagttagc tgggactaca ggcacatgcc
1081 accacacctg gctgattttt cccttttttg tggagtaggg gtctcactgc gttacccagg
1141 ctgttctcaa actcttgggc tcaagcgatc ctcctgcctc agcctgccaa agtgctggta
1201 ttacaggtat gagccaccac acctggccaa aacttagctt tagctttttt tttctccccc
1261 gcaagacagt cttgccctgt cgtcgggctg gagtgcggtg gcgccatctt ggctcactgc
1321 aacctcctcc ccgaggttca ggcggttctc ctgcctcggc ctcccgagtg gctggaacta
1381 taggcgtgcg cagacacccc cagctaattt ttgtattttt ggtagagacg gggtttcgcc
1441 atgtcggcta gggtggtctc gatctcttga cctcatgatc tgcccgcctg ggcctcccaa
1501 ggtgctggga ttgcaggcgt gagccactga gtcggccata cgtagctttt aagatccagc
1561 tttatttagg tgaaatcaac gtataaaata cacctacttt aagggtaaag tttgataagt
1621 tttgacagat gtatatacat ctgtatcact gcagccatcc accaccacag tcaagatacg
1681 gaatattttt atgtaagaca atgtttatcc agaaagaaaa ctttatccag aaagcttcct
1741 gatgcctctt ggtagtgagt acccatgttg gccccagaca gccattaatc tactttctat
1801 tcctgtagat tagttttacc ttttgtagaa ttgcatatga atgaaagcat agcttgcttt
1861 tttgtttttt tgtgttttgt tttttgtttg agatggagtt tcacttatgt tgcccaggct
1921 ggagtgcaat ggcacgatct cggctcaccg caacctctgg ctcctgggtt caagtgattc
1981 tcctgcctca gcctcccagg tggctgggat tgcaggcatg tgccaccatg cccggctaat
2041 tttgtatttt tagtagagac gaggtttctt catgttggtc aggctggtct tgaactcccg
2101 acctcaggtg atccaccctc cttggcctcc caaggtgctg agattacagg cgtgagccac
2161 cacgcatggc caaaacttag ctttttaata gtgaaagcag cataactgtt tttagaaacc
2221 atgaccattg agatttcctt tattgaggtg aaattcacat aacacaaaat taaccaattt
2281 aaattgtaca ggacagtgac atttattaca tttaccatgt gtgcaaccat caactttagg
2341 tcaaaaacct tttcatgact cacgaagaag acctcaaacc cattaaacag tcactcccca
2401 ttttcttctc cctctagctc ccagcaacta ccaatctgct ttctgtctct atggatttac
2461 cttttctggt tatttcctat aaatggcatc atataatata tgaccttttc tttctggctt
2521 cattcacttg atgtttttaa agttcattaa cattgtatac catgtatcag tatttcatac
2581 ctttttaatg ctgagttata gtccattgca tggataatac cacgttttgt tttatatgtt
2641 catccacaga tggatatttg ggttctttct acctttttgc tattgcaaat agtgctgttg
2701 tgaacatttg tgtacaggta tttgtttgaa ttcctgtttt cagttctttt atgtatatat
2761 ctagcagggt aattgctgga ttatatggta attctgtgtt taacttaata aggaactgac
2821 atactgtttt caacagcgat tgcaccattt tacattccta tcagctatat accagggtta
2881 cagtttctct acatctttgt cagcacttat attttccagg gttttttgtt ggtttgtttt
2941 agccacccta gtgagcatga ggtagtatct cactgtggtt ttgatcctgt ttcccccaaa
3001 tggctaatga tgctgagcct cttttcttgt tttttttttt tgtttgtttg tttgtttggc
3061 catgcgtata cctttggaga catatctatt caggtgcttt gcccattttt taaattgggt
3121 tgtttttttg tttttaaaag aattccttgt atattctgga tactagatgt ttatcagata
3181 catgatttgc aaatattttc tcctattttg tgggggtttg tttcatttat ttgatactgt
3241 cctttgacac acagttttta aaaattttga tgatgtccag tttatgtgtt ttgttgttgc
3301 ttgtgctttt gtgttttatt ttaaaatctt tgtttaatct ggccgggcac ggtggctcac
3361 gcctgtagtc ccagcacttt gggaggccga ggcgggtgaa tcatttgagg tcgggagttc
3421 gagaccggcc tggccgacgt ggtggaaccc cgtctctact agagatacaa aaaaaaaaaa
3481 aaaaataata ataataatct ttgtttaatc caaaattatc aagatttatt gctatgtttc
3541 cccctaagag tttatagttt tcagtcttac atttaggtct gtagttcatt tgagttcatt
3601 tttgcgtatg cgttgatgaa gaggtccaat tttattcttt cacaagtggt tatccagttt
3661 tgcctgcatc atttgtttaa tgtttcccca ttgactggtc ttggcaccct tgttgaaatt
3721 aattgaccat agatgtatgg gtttatttct agactctatt ctgtttcatt cttctatata
3781 tctgtcctat gccagtacca cactgtgtca attattgtag ctttgtagtg agttttgaaa
3841 tcaggacatg tgagttcaac tttgttcttt ttcaaaatta ttttagctat ttggggtctc
3901 ttgaaattcc atttgaattt taggattagc ttttccattt ctgtaaaaag tattgttggg
3961 attttggtgg ggattgcatt gaatatgtag tcacattggg aagtattacc atcttaatga
4021 tattaagtct tccagtccat gaacttggga tttttccatc tatttagata tttccttcag
4081 caatgttttg tgatttttag tatatacgtc ctgcacctct ttggttaaat ttatcactaa
4141 gtatttgatt tttttattct actataaatg gaattgtttc cttaatttcc tttttagatt
4201 gtttactgct atttatagaa atacaacaga tatttgtgta ttgcttttgc ataatgtaac
4261 ttctgctgaa tttattagct caaataatac ttttgtggat cttattctat gtataagatt
4321 acaccatctg tgaatagaga taattttact tgtttctttt caatttggat gccctttatc
4381 tttcttgcct gattgccctg gctaggacct cgactacagt gttgactaca ggtggcgaaa
4441 atgagcatct ttgtcttgtt cctgatctta taaggaaagc tttcagtctt ctaccattga
4501 gtatgatggt agctgtgagt tttttataat aaccttttat caggttgagg aagttccttc
4561 ccatttttaa tttattgagt gttttatcat gagaggttgt tggattttgt caaatttttt
4621 ttctgcattt attgggatga tcatgtgggg tttttccccc tacattcttc taatgtgtat
4681 gtaatacata tttgattttt ccatgttgaa ccaccattgc attcggccat tgagatttta
4741 atctaggagt ctattaattg aataaggatt caaaataagg gttccatatg ttgtttttaa
4801 atgttttcac tatttctgag gaaatctaaa tatattttaa gtatcaatag aagagatgta
4861 tttgttttct tctttttgtt tttgtaagag tgtcaatggt tgatagaata atgggaggga
4921 ggtagtgaac cagaagatac taggacgtat attatagggc tacagtaatg aagcagtgct
4981 aatggacaga tacgaaacta aagatgaagt gtaggaacag ctcaagtgta gataagcact
5041 gaagctgggc atggtggctc acgcctttaa tcccaacact ttgggtggcg gaggtaggag
5101 aatcacttga gcccaggagg tcaaggctgc agtgagccat gatcctacca ctgcactcta
5161 gcctgggtgg cagagcaaga ctctgtctc
//