LOCUS AB209754 7455 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for triple functional domain (PTPRF interacting) variant protein. ACCESSION AB209754 VERSION AB209754.1 KEYWORDS FLI_CDNA. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 7455) AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A., Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F. TITLE Direct Submission JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Osamu Ohara Kazusa DNA Research Institute, Department of Human Gene Research; 2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan URL :http://protein.gsc.riken.go.jp/ REFERENCE 2 AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A., Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F. TITLE Homo sapiens protein coding cDNA JOURNAL Published Only in Database(2005) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis , Ministry of Education, Culture , Sports, Science and Technology of Japan. Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S. RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi, Yokohama 230-0045, Japan. URL: http://protein.gsc.riken.go.jp/ FEATURES Location/Qualifiers source 1..7455 /clone="bg00195" /db_xref="H-InvDB:HIT000329689" /db_xref="taxon:9606" /mol_type="mRNA" /note="this clone is also named as hsk003002119" /note="vector:pBluescriptII SK plus" /organism="Homo sapiens" /tissue_type="brain" CDS <1..6610 /codon_start=2 /inference="non-experimental evidence, no additional details recorded" /note="Start codon is not identified." /product="triple functional domain (PTPRF interacting) variant" /protein_id="BAD92991.1" /translation="LFLNSYTEIGTSHPHAMELQTQHNHFAMNCMNVYVNINRIMSVA NRLVESGHYASQQIRQIASQLEQEWKAFAAALDERSTLLDMSSIFHQKAEKYMSNVDS WCKACGEVDLPSELQDLEDAIHHHQGIYEHITLAYSEVSQDGKSLLDKLQRPLTPGSS DSLTASANYSKAVHHVLDVIHEVLHHQRQLENIWQHRKVRLHQRLQLCVFQQDVQQVL DWIENHGEAFLSKHTGVGKSLHRARALQKRHEDFEEVAQNTYTNADKLLEAAEQLAQT GECDPEEIYQAAHQLEDRIQDFVRRVEQRKILLDMSVSFHTHVKELWTWLEELQKELL DDVYAESVEAVQDLIKRFGQQQQTTLQVTVNVIKEGEDLIQQLRDSAISSNKTPHNSS INHIETVLQQLDEAQSQMEELFQERKIKLELFLQLRIFERDAIDIISDLESWNDELSQ QMNDFDTEDLTIAEQRLQHHADKALTMNNLTFDVIHQGQDLLQYVNEVQASGVELLCD RDVDMATRVQDLLEFLHEKQQELDLAAEQHRKHLEQCVQLRHLQAEVKQVLGWIRNGE SMLNAGLITASSLQEAEQLQREHEQFQHAIEKTHQSALQVQQKAEAMLQANHYDMDMI RDCAEKVASHWQQLMLKMEDRLKLVNASVAFYKTSEQVCSVLESLEQEYKREEDWCGG ADKLGPNSETDHVTPMISKHLEQKEAFLKACTLARRNADVFLKYLHRNSVNMPGMVTH IKAPEQQVKNILNELFQRENRVLHYWTMRKRRLDQCQQYVVFERSAKQALEWIHDNGE FYLSTHTSTGSSIQHTQELLKEHEEFQITAKQTKERVKLLIQLADGFCEKGHAHAAEI KKCVTAVDKRYRDFSLRMEKYRTSLEKALGISSDSNKSSKSLQLDIIPASIPGSEVKL RDAAHELNEEKRKSARRKEFIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGI VNKELIIFGNMQEIYEFHNNIFLKELEKYEQLPEDVGHCFVTWADKFQMYVTYCKNKP DSTQLILEHAGSYFDEIQQRHGLANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGE IKDGLEVMLSVPKRANDAMHLSMLEGFDENIESQGELILQESFQVWDPKTLIRKGRER HLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTS DNKIVLKASSIENKQDWIKHIREVIQERTIHLKGALKEPIHIPKTAPATRQKGRRDGE DLDSQGDGSSQPDTISIASRTSQNTLDSDKLSGGCELTVVIHDFTACNSNELTIRRGQ TVEVLERPHDKPDWCLVRTTDRSPAAEGLVPCGSLCIAHSRSSMEMEGIFNHKDSLSV SSNDASPPASVASLQPHMIGAQSSPGPKRPGNTLRKWLTSPVRRLSSGKADGHVKKLA HKHKKSREVRKSADAGSQKDSDDSAATPQDETVEERGRNEGLSSGTLSKSSSSGMQSC GEEEGEEGADAVPLPPPMAIQQHSLLQPDSQDDKASSRLLVRPTSSETPSAAELVSAI EELVKSKMALEDRPSSLLVDQGDSSSPSFNPSDNSLLSSSSPIDEMEERKSSSLKRRH YVLQELVETERDYVRDLGYVVEGYMALMKEDGVPDDMKGKDKIVFGNIHQIYDWHRDF FLGELEKCLEDPEKLGSLFVKHERRLHMYIAYCQNKPKSEHIVSEYIDTFFEDLKQRL GHRLQLTDLLIKPVQRIMKYQLLLKDFLKYSKKASLDTSELERAVEVMCIVPRRCNDM MNVGRLQGFDGKIVAQGKLLLQDTFLVTDQDAGLLPRCRERRIFLFEQIVIFSEPLDK KKGFSMPGFLFKNSIKVSCLCLEENVENDPCKFALTSRTGDVVETFILHSSSPSVRQT WIHEINQILENQRNFLNALTSPIEYQRNHSGGGGGGGSGGSGGGGGSGGGGAPSGGSG HSGGPSSCGGAPSTSRSRPSRIPQPVRHHPPVLVSSAASSQAEADKMSGTSTPGPSLP PPGAAPEAGPSAPSRRPPGADAEGSEREAEPIPKMKVLESPRKGAANASGSSPDAPAK DARASLGTLPLGKPRAGAASPLNSPLSSAVPSLGKEPFPPSSPLQKGGSFWSSIPASP ASRPGSFTFPGDSDSLQRQTPRHAAPGKDTDRMSTCSSASEQSVQSTQSNGVSASGGP RPPAPLPLSRQL" BASE COUNT 1889 a 2027 c 2018 g 1521 t ORIGIN 1 cctgtttcta aacagctaca cagagattgg gaccagccac cctcatgcca tggagcttca 61 gacgcagcac aatcactttg ccatgaactg tatgaacgtg tatgtaaata taaaccgcat 121 catgtcggtg gccaatcgtc tggtggagtc tggccactat gcctcgcagc agatcaggca 181 gatcgcgagt cagctggagc aggagtggaa ggcgtttgcg gcagccctgg atgagcggag 241 caccttgctg gacatgtcct ccattttcca ccagaaggcc gaaaagtata tgagcaacgt 301 ggattcatgg tgtaaagctt gcggtgaggt agaccttccc tcagagctgc aggacctaga 361 agatgccatt catcaccacc agggaatata tgaacatatc actcttgctt attctgaggt 421 cagccaagat gggaagtcgc tccttgacaa gctccagcgg cccttgactc ccggcagctc 481 cgattccctg acagcctctg ccaactactc caaggccgtg caccatgtcc tggatgtcat 541 ccacgaggtg ctgcaccacc agcggcagct ggagaacatc tggcaacacc gcaaggtccg 601 gctgcatcag aggctgcagc tgtgtgtttt ccagcaggac gttcagcagg tgctagactg 661 gatcgagaac cacggagaag catttctgag caaacataca ggtgtgggga aatctcttca 721 tcgggccaga gcattgcaga aacgtcatga agattttgaa gaagtggcac agaacacata 781 caccaatgcg gataaattac tggaagcagc agaacagctg gctcagactg gggaatgtga 841 ccccgaagag atttatcagg ctgcccatca gctggaagac cggattcaag atttcgttcg 901 gcgtgttgag cagcgaaaga tcctactgga catgtcagtg tcctttcaca cccatgtgaa 961 agagctgtgg acgtggctgg aggagctgca gaaggagctg ctggacgacg tgtatgccga 1021 gtcggtggag gccgtgcagg acctcatcaa gcgctttggc cagcagcagc agaccaccct 1081 gcaggtgact gtcaacgtga tcaaggaagg ggaggacctc atccagcagc tcagggactc 1141 tgccatctcc agtaacaaga ccccccacaa cagctccatc aaccacattg agacggtgct 1201 gcagcagctg gacgaggcgc agtcgcagat ggaggagctc ttccaggagc gcaagatcaa 1261 gctggagctc ttcctgcagc tgcgcatctt cgagagggac gccatcgaca ttatctcaga 1321 cctcgagtct tggaatgatg agctttctca gcaaatgaat gacttcgaca cagaagatct 1381 cacgattgca gagcagcgcc tccagcacca tgcagacaaa gccttgacca tgaacaactt 1441 gacttttgac gtcatccacc aagggcaaga tcttctgcag tatgtcaatg aggtccaggc 1501 ctctggtgtg gagctgctgt gtgatagaga tgtagacatg gcaactcggg tccaggacct 1561 gctggagttt cttcatgaaa aacagcagga attggattta gccgcagagc agcatcggaa 1621 acacctggag cagtgcgtgc agctgcgcca cctgcaggca gaagtgaaac aggtgctggg 1681 ttggatccgc aacggagagt ccatgttaaa tgccggactt atcacagcca gctcgttaca 1741 agaggcagag cagctccagc gagagcacga gcagttccag catgccattg agaaaacaca 1801 tcagagcgcg ctgcaggtgc agcagaaggc agaagccatg ctacaggcca accactacga 1861 catggacatg atccgggact gcgccgagaa ggtggcgtct cactggcaac agctcatgct 1921 caagatggaa gatcgcctca agctcgtcaa cgcctctgtc gctttctaca aaacctcaga 1981 gcaggtctgc agcgtcctcg agagcctgga acaggagtac aagagagaag aagactggtg 2041 tggcggggcg gataagctgg gcccaaactc tgagacggac cacgtgacgc ccatgatcag 2101 caagcacctg gagcagaagg aggcattcct gaaggcttgc acccttgctc ggaggaatgc 2161 agacgtcttc ctgaaatacc tgcacaggaa cagcgtgaac atgccaggaa tggtgacgca 2221 catcaaagct cctgaacagc aagtgaaaaa tatcttgaat gaactcttcc aacgggagaa 2281 cagggtattg cattactgga ccatgaggaa gagacggctg gaccagtgtc agcagtacgt 2341 ggtctttgag aggagtgcca agcaggcttt ggaatggatc catgacaatg gcgagttcta 2401 cctttccaca cacacctcca cgggctccag tatacagcac acccaggagc tcctgaaaga 2461 gcacgaggag ttccagataa ctgcaaagca aaccaaagag agagtgaagc tattgataca 2521 gctggctgat ggcttttgtg aaaaagggca tgcccatgcg gcagagataa aaaaatgtgt 2581 tactgctgtg gataagaggt acagagattt ctctctgcgg atggagaagt acaggacctc 2641 tttggaaaaa gccctgggga tttcttcaga ttccaacaaa tcgagtaaaa gtctccagct 2701 agatatcatt ccagccagta tccctggctc agaggtgaaa cttcgagatg ctgctcatga 2761 acttaatgaa gagaagcgga aatctgcccg caggaaagag ttcataatgg ctgagctcat 2821 tcaaactgaa aaggcttatg taagagacct ccgggaatgt atggatacgt acctgtggga 2881 aatgaccagt ggcgtggaag agattccacc tggcattgta aacaaagaac tcatcatctt 2941 cggaaacatg caagaaatct acgaatttca taataacata ttcctaaagg agctggaaaa 3001 atatgaacag ttgccagagg atgttggaca ttgttttgtt acttgggcag acaagtttca 3061 gatgtatgtc acatattgca aaaataagcc tgattctact cagctgatat tggaacatgc 3121 agggtcctat tttgacgaga tacagcagcg acatggatta gccaattcca tttcttccta 3181 ccttattaaa ccagttcagc gaataacgaa gtatcagctc cttttaaaag agctgctgac 3241 gtgctgtgag gaaggaaagg gagagattaa agatggcctg gaggtgatgc tcagcgtgcc 3301 gaagcgagcc aatgatgcca tgcacctcag catgctggaa gggtttgatg aaaacattga 3361 atctcaggga gaactcatcc tacaggaatc cttccaagtg tgggacccaa aaaccttaat 3421 tcgaaagggt cgagaacggc atctcttcct ttttgaaatg tccttagtat ttagtaaaga 3481 agtgaaagat tccagtggga gaagcaagta cctttataaa agcaaattgt ttacctcaga 3541 gttgggtgtc acagaacatg ttgaaggaga cccttgcaaa tttgcactgt gggtggggag 3601 aacaccaact tcagataata aaattgtcct taaggcttcc agcatagaga acaagcagga 3661 ctggataaag catatccgcg aagtcatcca ggagcggacg atccacctga agggagccct 3721 gaaggagccc attcacatcc ctaagaccgc tcccgccaca agacagaagg gaaggaggga 3781 tggagaggat ctggacagcc aaggagacgg cagcagccag cctgatacga tttccatcgc 3841 ctcacggacg tctcagaaca cgctggacag cgataagctc tctggtggct gtgagctgac 3901 agtggtgatc catgacttca ccgcttgcaa cagcaacgag ctgaccatcc gacggggcca 3961 gaccgtggaa gttctggagc ggccgcatga caagcctgac tggtgtctgg tgcggacaac 4021 tgaccgctcc ccagcggcag aaggcctggt cccctgtggt tcactgtgca tcgcccactc 4081 cagaagtagc atggaaatgg agggcatctt caaccacaaa gactcgctct ccgtctccag 4141 caatgacgcc agtccacccg catccgtggc ttccctccag ccccacatga tcggggccca 4201 gagctcgccg ggccccaagc ggccgggcaa caccctgcgc aagtggctca ccagccccgt 4261 gcggcggctc agcagcggca aggccgacgg gcacgtgaag aagctggcgc acaagcacaa 4321 gaagagccgc gaggtccgca agagcgccga cgccggctcg cagaaggact ccgacgacag 4381 tgcggccacc ccgcaggacg agacggtcga ggagagaggc cggaacgagg gcctgagcag 4441 cggtactctc tccaaatcct cctcctcggg gatgcagagc tgtggagaag aggaaggcga 4501 ggagggggcc gacgccgtgc ccctgccgcc acccatggcc atccagcagc acagcctcct 4561 ccagccagac tcacaggatg acaaggcctc ttctcggtta ttagtccgcc ccaccagctc 4621 cgaaacaccg agtgcagccg agctcgtcag tgcaattgag gaactcgtga aaagcaagat 4681 ggcactggag gatcgcccca gctcactcct tgttgaccag ggagatagta gcagcccttc 4741 cttcaaccct tcggataatt cccttctctc ttcctcctcg cccattgatg agatggaaga 4801 aaggaaatcc agctctttaa agagaagaca ctacgttttg caagaactag tggagacaga 4861 gcgtgactat gtgcgggacc ttggctatgt ggttgagggc tacatggcac ttatgaaaga 4921 agatggtgtt cctgatgaca tgaaaggaaa agacaaaatt gtgttcggca acatccatca 4981 gatttacgac tggcacagag actttttttt aggagagtta gagaagtgcc ttgaagatcc 5041 agaaaaacta ggatcccttt ttgttaaaca cgagagaagg ttgcacatgt acatagctta 5101 ttgtcaaaat aaaccaaagt ctgagcacat tgtctcagaa tacattgata ccttttttga 5161 ggacttaaag cagcgtcttg gccacaggtt acagctcaca gatctgttga tcaaaccagt 5221 gcagagaatc atgaagtatc agctgttact gaaggacttc ctcaagtatt ccaaaaaggc 5281 cagcctggat acatcagaat tagagagagc tgtggaagtc atgtgcatag tacccaggcg 5341 gtgcaacgac atgatgaacg tggggcggct gcaaggattc gacgggaaaa tcgttgccca 5401 gggtaaactg ctcttgcagg acacattctt ggtcacagac caagatgcag gacttctgcc 5461 tcgctgcaga gagaggcgca tcttcctctt tgagcagatc gtcatattca gcgaaccact 5521 tgataaaaag aagggcttct ccatgccggg attcctgttt aagaacagta tcaaggtgag 5581 ttgcctttgc ctggaggaaa atgtggaaaa tgatccctgt aaatttgctc tgacatcgag 5641 gacgggtgac gtggtagaga ccttcatttt gcattcatct agtccaagtg tccggcaaac 5701 ttggatccat gaaatcaacc aaattttaga aaaccagcgc aattttttaa atgccttgac 5761 atcgccaatc gagtaccaga ggaaccacag cgggggcggc ggcggcggcg gcagcggggg 5821 cagcggcggg ggtgggggca gcggcggcgg cggggccccc agtggcggca gcggccacag 5881 tggcggcccc agcagctgcg gcggcgcccc cagcacgagc aggagccggc cctcccggat 5941 cccccagcct gtccgacacc acccccccgt gctggtctcc tctgcagcct cgagccaggc 6001 agaggcagac aagatgtcag gtacgtccac ccccgggccc tccctgcctc cccctggcgc 6061 ggcccccgag gccggcccca gcgcgcccag caggcggccc cccggcgcgg acgccgaggg 6121 gtccgagcga gaagcggagc cgatccccaa gatgaaggtg ctggagagcc ccaggaaagg 6181 cgccgcgaac gcctcggggt cgagcccaga cgcccccgcc aaggacgcgc gcgctagcct 6241 gggcaccctg ccgcttggga agccccgggc cggggccgct tcgccgctga actcgccgct 6301 ctccagcgcg gtcccttctc tcggcaagga gcccttcccc cccagcagcc ccctgcagaa 6361 ggggggctcc ttctggagct ccatccccgc ctcccccgcc agccgacccg gctccttcac 6421 cttcccgggg gacagcgact ccctccagcg gcagacaccc cgccacgcgg cccctggcaa 6481 ggatactgac cgcatgagca cgtgctcctc ggccagcgag cagtccgtgc agtccaccca 6541 gagcaacggg gtaagcgcgt cggggggccc gcgccctccc gcccccctgc ctctgtcccg 6601 ccagctctaa acgccaccgc ggctgttctc actaactcgg ctgcccagcg ctctccgccg 6661 cccgttgcgg cctctacctg ggaccaggct aaccctcctg cgggccggcc cacggcgcta 6721 ctaactactc cttgctttgt tcgtgtcttc taataagagc aagccgatca ttaaccttct 6781 caacgcagcg tcttttggtt tcttccattt ccaaccagca gaatatcttc ttggaacttt 6841 cttttttaac ctctgccttc ctcacgcacc tattttttgg agggttcctt ttccctgctc 6901 tctacctcct gtttaaattg aaacctgtac actttaagct ttttgctcat cgcttggttt 6961 tgctctttta tgccttaaat tatctttgcg gcatttttga ctcatctgct ggggaagacc 7021 attccctcaa gaaaacttcc aacagcaact caaagcaaac taagatgaaa aaatgggggg 7081 aaagaatctg tccactggga acgctttacg tcaccgtgtt gctctggaag acagagactg 7141 ctctgggcac ctggcgaggc ggctctgcag tgcaggctgg ggccggtccc tgcggcctgc 7201 tgggctctgg cctcgtttgg cccatcactc atgctgccgt ctcaagcaca agggttgctg 7261 tggtgggttt tccctctgtt tcctgcttcc tcactgtcct acccacctgt ttcctacagg 7321 gcagatggcc tggcccgtaa cactttcctg aaggcatgcg tgagtgaata gaactgttct 7381 aatgagtgta tgtttgaacg ctttataaat ttttaaatac atttctctaa aagggtctgt 7441 gtctctcttt atatt //