LOCUS AB209748 7248 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for spectrin, beta, non-erythrocytic 1 isoform 1
variant protein.
ACCESSION AB209748
VERSION AB209748.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7248)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..7248
/clone="bf02259"
/db_xref="H-InvDB:HIT000329683"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003002113"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <89..7222
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="spectrin, beta, non-erythrocytic 1 isoform 1
variant"
/protein_id="BAD92985.1"
/translation="EGADVEEQLRQFKMTTTVATDYDNIEIQQQYSDVNNRWDVDDWD
NENSSARLFERSRIKALADEREAVQKKTFTKWVNSHLARVSCRITDLYTDLRDGRMLI
KLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTL
GLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDG
MAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDE
KSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQT
IIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQK
VYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAMRETW
LSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVARELEAENYHD
IKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLVLS
QDYGKHLLGVEDLLQKHTLVEADIGIQAEWVRGVNASAQKFATDGEGYKPCDPQVIRD
RVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKILSSDDYGKD
LTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIIYIREQWA
NLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQSLVKK
HKDVAEEIANYRPTLDTLHEQASALPQEHAESPDVRGRLSGIEERYKEVAELTRLRKQ
ALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQN
YHLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQK
EAEKLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQ
SWLSRTQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQT
DAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYV
LAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEK
VDSIDDRHRKNRETASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEAR
NLHSKWLKHQAFMAELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVL
ESTTQTKAQRLFDANKAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQ
MLENQMEVRKKEIEELQSQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNL
LASKEIHQFNRDVEDEILWVGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQP
RIDDIFERSQNIVTDSSSLSAEAIRQRLADLKQLWGLLIEETEKRHRRLEEAHRAQQY
YFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTS
RALVADSHPESERISMRQSKVDKLYAGLKDLAEERRGKLDERHRLFQLNREVDDLEQW
IAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHS
DAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLP
EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKREN
EVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSS
VELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMI
DKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHEA
FEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPPSPEPSTKVSEEAESQQQW
DTSKGEQVSQNGLPAEQGSPRMAETVDTSEMVNGATEQRTSSKESSPIPSPTSDRKAK
TALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMG
FYKDAKTAASGIPYHSEVPVSLKEAVCEVALDYKKKKHVFKLRLNDGNEYLFQAKDDE
EMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSESSPGKREKDKEK
DKEKRFSLFGKKK"
BASE COUNT 2062 a 1834 c 2070 g 1282 t
ORIGIN
1 tcgcctcccg gcccacccgc ccggccgccg aggagcggga ggaggacggg accccggcgc
61 ccccacccca tccccgggag aactctaaga aggagctgat gtggaggagc agctgagaca
121 gttcaagatg acgaccacag tagccacaga ctatgacaac attgagatcc agcagcagta
181 cagtgatgtc aacaaccgct gggatgtcga cgactgggac aatgagaaca gctctgcgcg
241 gctttttgag cggtcccgca tcaaggctct ggcagatgag cgtgaagccg tgcagaagaa
301 gaccttcacc aagtgggtca attcccacct tgcccgtgtg tcctgccgga tcacagacct
361 gtacactgac cttcgagatg gacggatgct catcaagctg ctggaggtcc tctctggaga
421 gaggctgcct aaacccacca agggacgaat gcgcatccac tgcttagaga atgtggacaa
481 ggcccttcag ttcctgaagg agcagagagt ccatcttgag aacatggggt cccatgacat
541 cgtggatgga aaccaccggc tgacccttgg cctcatctgg accatcatcc tgcgcttcca
601 gatccaggat atcagtgtgg aaactgaaga caacaaagag aagaaatctg ccaaggatgc
661 attgctgttg tggtgccaga tgaagacagc tgggtacccc aatgtcaaca ttcacaattt
721 caccactagc tggagggatg gcatggcctt caatgcactg atacacaaac accggcctga
781 cctgatagat tttgacaaac taaagaaatc taacgcacac tacaacctgc agaatgcatt
841 taatctggca gaacagcacc tcggcctcac taaactgttg gaccccgaag acatcagcgt
901 ggaccatcct gatgagaagt ccataatcac ttatgtggtg acttattacc actacttctc
961 taagatgaag gccttagctg ttgaaggaaa acgaattgga aaggtgcttg acaatgctat
1021 tgaaacagaa aaaatgattg aaaagtatga atcacttgcc tctgaccttc tggaatggat
1081 tgaacaaacc atcatcattc tgaacaatcg caaatttgcc aattcactgg tcggggttca
1141 acagcagctt caggcattca acacttaccg cactgtggag aaaccaccca aatttactga
1201 gaaggggaac ttggaagtgc tgctcttcac cattcagagc aagatgaggg ccaacaacca
1261 gaaggtctac atgccccggg aggggaagct catctctgac atcaacaagg cctgggaaag
1321 actggaaaaa gcggaacacg aaagagaact ggctttgcgg aatgagctca taagacagga
1381 gaaactggaa cagctcgccc gcagatttga tcgcaaggca gctatgaggg agacttggct
1441 gagcgaaaac cagcgtctgg tgtctcagga caactttggg tttgaccttc ctgcagttga
1501 ggccgccaca aaaaagcacg aggccattga gacagacatt gccgcatacg aggagcgtgt
1561 gcaggctgtg gtagccgtgg ccagggagct cgaggccgag aattaccacg acatcaagcg
1621 catcacagcg aggaaggaca atgtcatccg gctctgggaa tacctactgg aactgctcag
1681 ggcccggaga cagcggctcg agatgaacct ggggctgcag aagatattcc aggaaatgct
1741 ctacattatg gactggatgg atgaaatgaa ggtgctagta ttgtctcaag actatggcaa
1801 acacttactt ggtgtggaag acctgttaca gaagcacacc ctggttgaag cagacattgg
1861 catccaggca gagtgggtga gaggtgtcaa tgcctccgcc cagaagttcg caacagacgg
1921 ggaaggttac aagccctgtg acccccaggt gatccgagac cgcgtggccc acatggagtt
1981 ctgttatcaa gagctttgcc agctggcggc tgagcgcagg gcccgtctgg aagagtcccg
2041 ccgcctctgg aagttcttct gggagatggc agaagaggaa ggctggatac gggagaagga
2101 gaagatcctg tcctcggacg attacgggaa agacctgacc agcgtcatgc gcctgctcag
2161 caagcaccgg gcgttcgagg acgagatgag cggccgcagt ggccactttg agcaggccat
2221 caaggaaggc gaagacatga tcgcggagga gcacttcggg tcggagaaga tccgtgagag
2281 gatcatttac atccgggagc agtgggccaa cctagagcag ctctcggcca ttcggaagaa
2341 gcgcctggag gaggcctccc tgctgcacca gttccaggca gatgctgatg acattgatgc
2401 ctggatgctg gacatcctca agattgtctc cagcagcgac gtgggccacg atgagtattc
2461 cacacagtct ctggtcaaga aacacaagga cgtggcggaa gagatcgcca attacaggcc
2521 cacccttgac acgctgcacg aacaagccag cgccctcccc caggagcatg ccgagtctcc
2581 agacgtgagg ggcaggctgt cgggcatcga ggagcggtat aaggaggtgg cagagctgac
2641 gcggctgcgg aagcaggcac tccaggacac tctggccctg tacaagatgt tcagcgaggc
2701 tgatgcctgt gagctctgga tcgacgagaa ggagcagtgg ctcaacaaca tgcagatccc
2761 agagaagctg gaggatctgg aggtcatcca gcacagattt gagagcctag aaccagaaat
2821 gaacaaccag gcttcccggg ttgcagtggt gaaccagatt gcacgccagc tgatgcacag
2881 cggccaccca agtgagaagg aaatcaaagc ccagcaggac aaactcaaca caaggtggag
2941 ccagttcaga gaactggttg acaggaagaa ggatgccctc ctgtctgccc tgagcatcca
3001 gaactaccac ctcgagtgca atgaaaccaa atcctggatt cgggaaaaga ccaaggtcat
3061 cgagtccacc caggacctgg gcaatgacct ggctggcgtc atggccctgc agcgcaagct
3121 gaccggcatg gagcgggact tggtggccat tgaggcaaag ctgagtgacc tgcagaagga
3181 ggcggagaag ctggagtccg agcaccccga ccaggcccag gccatcctgt ctcggctggc
3241 cgagatcagc gacgtgtggg aggagatgaa gaccaccctg aaaaaccgag aggcctccct
3301 gggagaggcc agcaagctgc agcagttcct acgggacttg gacgacttcc agtcctggct
3361 ctctaggacc cagacagcga tcgcctcgga ggacatgcca aacaccctga ccgaggctga
3421 gaagctgctc acgcagcacg agaacatcaa gaacgagatc gacaactacg aggaggacta
3481 ccagaagatg agggacatgg gcgagatggt cacccagggg cagaccgatg cccagtacat
3541 gtttctgcgg cagcggctgc aggccctgga cactggatgg aacgagctcc acaagatgtg
3601 ggagaacaga caaaatctcc tatcccagtc acatgcctac cagcagttcc tcagagacac
3661 gaagcaagcc gaagcctttc ttaacaacca ggagtatgtt ctggctcaca ctgaaatgcc
3721 taccaccttg gaaggagctg aagcagcaat taaaaagcaa gaggacttca tgaccaccat
3781 ggacgccaat gaggagaaga tcaatgctgt ggtggagact ggccggaggc tggtgagcga
3841 tgggaacatc aactcagatc gcatccagga gaaggtggac tctattgatg acagacatag
3901 gaagaatcgt gagacagcca gtgaactttt gatgaggttg aaggacaaca gggatctaca
3961 gaaattcctg caagattgtc aagagctgtc tctctggatc aatgagaaga tgctcacagc
4021 ccaggacatg tcttacgatg aagccagaaa tctgcacagt aaatggttga agcatcaagc
4081 atttatggca gaacttgcat ccaacaaaga atggcttgac aaaatcgaga aggaaggaat
4141 gcagctcatt tcagaaaagc ctgagacgga agctgtggtg aaggagaaac tcactggttt
4201 acataaaatg tgggaagtcc ttgaatccac tacccagaca aaggcccagc ggctctttga
4261 tgcaaacaag gccgaacttt tcacccagag ctgtgcagat ctagacaaat ggctgcacgg
4321 cctggagagt cagattcagt ctgatgacta tggcaaagac ctgaccagtg tcaatatcct
4381 gctgaaaaag caacagatgc tggagaatca gatggaagtg cggaagaagg agatcgaaga
4441 gctccaaagc caagcccagg ccctgagtca ggaagggaag agcaccgacg aggtagacag
4501 caagcgcctc accgtgcaga ccaagttcat ggagttgctg gagcccttga acgagaggaa
4561 gcataacctg ctggcctcca aagagatcca tcagttcaac agggatgtgg aggacgagat
4621 cttgtgggtt ggagagagga tgcctttggc aacttccacg gatcatggcc acaacctcca
4681 gactgtgcag ctgttaataa agaaaaatca gaccctccag aaagaaatcc aggggcacca
4741 gcctcgcatt gacgacatct ttgagaggag ccaaaacatc gtcactgaca gcagcagcct
4801 cagcgctgag gccatcagac agaggcttgc cgacctgaag cagctgtggg gtctcctcat
4861 tgaggagaca gagaaacgcc acaggcggct ggaggaggcg cacagggccc agcagtacta
4921 ctttgacgct gctgaggccg aagcctggat gagcgagcag gagctgtaca tgatgtcaga
4981 ggagaaggcc aaggatgagc agagtgctgt ctccatgttg aagaagcacc agatcttaga
5041 acaagctgtg gaggactatg cagagaccgt gcatcagctc tccaagacca gccgggccct
5101 ggtggccgac agccatcctg aaagtgagcg cattagcatg cggcagtcca aagtggataa
5161 actgtacgct ggtctgaaag accttgctga agagagaaga ggcaagctgg atgagagaca
5221 caggttattc cagctcaacc gggaggtgga cgacctggag cagtggatcg ctgagaggga
5281 ggtggtcgca gggtcccatg aactgggaca ggactatgag catgtcacga tgttacaaga
5341 acgattccgg gagtttgccc gagacaccgg gaacattggg caggagcgcg tggacacggt
5401 caatcacctg gcagatgagc tcatcaactc tggacattca gatgccgcca ccatcgctga
5461 atggaaggat ggcctcaatg aagcctgggc cgacctcctg gagctcattg acacaagaac
5521 acagattctt gccgcttcct atgaactgca caagttttac cacgatgcca aggagatctt
5581 tgggcgtata caggacaaac acaagaaact ccctgaggag cttgggagag atcagaacac
5641 agtggagacc ttacagagaa tgcacactac atttgagcat gacatccagg ctctgggcac
5701 acaggtgagg cagctgcagg aggatgcagc ccgcctccag gcggcctatg cgggtgacaa
5761 ggccgacgat atccagaagc gcgagaacga ggtcctggaa gcctggaagt ccctcctgga
5821 cgcctgtgag agccgcaggg tgcggctggt ggacacaggg gacaagttcc gcttcttcag
5881 catggtgcgc gacctcatgc tctggatgga ggatgtcatc cggcagatcg aggcccagga
5941 gaagccaagg gatgtatcat ctgttgaact cttaatgaat aatcatcaag gcatcaaagc
6001 tgaaattgat gcacgtaatg acagtttcac aacctgcatt gaacttggga aatccctgtt
6061 ggcgagaaaa cactatgcat ctgaggagat caaggaaaaa ttactgcagt tgacggaaaa
6121 gaggaaagaa atgatcgaca agtgggaaga ccgatgggaa tggttaagac tgattctgga
6181 ggtccatcag ttctcaagag acgccagtgt ggccgaggcc tggctgcttg gacaggagcc
6241 gtacctatcc agccgagaga taggccagag cgtggacgag gtggagaagc tcatcaagcg
6301 ccacgaggca tttgaaaagt ctgcagcaac ctgggatgag aggttctctg ccctggaaag
6361 gctgactaca ttggagttac tggaagtgcg cagacagcaa gaggaagagg agaggaagag
6421 gcggccgcct tctcccgagc cgagcacgaa ggtttcagag gaagccgagt cccagcagca
6481 gtgggatact tcaaaaggag aacaagtttc ccaaaacggt ttgccagctg aacagggatc
6541 tccacggatg gcagaaacgg tggacacaag cgaaatggtc aacggcgcta cagaacaaag
6601 gacgagctct aaagagtcca gccccatccc ctccccgacc tctgatcgta aagccaagac
6661 tgccctccca gcccagagtg ccgccacctt accagccaga acccaggaga caccttcggc
6721 ccagatggaa ggcttcctca atcggaaaca cgagtgggag gcccacaata agaaagcctc
6781 aagcaggtcc tggcacaatg tttattgtgt cataaataac caagaaatgg gtttctacaa
6841 agatgcaaag actgctgctt ctggaattcc ctaccacagc gaggtccctg tgagtttgaa
6901 agaagctgtc tgcgaagtgg cccttgatta caaaaagaag aaacacgtat tcaagctaag
6961 actaaatgat ggcaatgagt acctcttcca agccaaagac gatgaggaaa tgaacacatg
7021 gatccaggct atctcttccg ccatctcctc tgataaacac gaggtgtctg ccagcaccca
7081 gagcacgcca gcatccagcc gcgcgcagac cctccccacc agcgtcgtca ccatcaccag
7141 cgagtccagt cccggcaagc gggaaaagga caaagagaaa gacaaagaga agcggttcag
7201 cctttttggc aaaaagaaat gaactccttt ccttcacctc ctgccctt
//