LOCUS AB209646 5463 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for COL4A1 protein variant protein.
ACCESSION AB209646
VERSION AB209646.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5463)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..5463
/clone="sh06344"
/db_xref="H-InvDB:HIT000329581"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003001873"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="spleen"
CDS <1528..4071
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="COL4A1 protein variant"
/protein_id="BAD92883.1"
/translation="YRRISGASRATGTPGRNRFPRAARGQGLPGITGQSGLPGLPGQQ
GAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKG
DKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQ
AGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLP
GDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGL
KGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSD
GIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGP
PGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGVKGDKGNPG
WPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKGLPGLQGIKGD
QGDHGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGLPGPKGQQGVTGL
VGIPGPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPPGTPSVDHGF
LVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLF
CNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGENIRPFISRCAVCEAPAMVMAVHS
QTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT"
BASE COUNT 1389 a 1374 c 1560 g 1140 t
ORIGIN
1 gccgccgcac ccgggacggt gcgtatcgct ggaagtccgg ccttccgaga gctagctgtc
61 cgccgcggcc cccgcacgcc gggcagccgt ccctcgccgc ctcgggcgcg ccaccatggg
121 gccccggctc agcgtctggc tgctgctgct gcccgccgcc cttctgctcc acgaggagca
181 cagccgggcc gctgcgaagg gtggctgtgc tggctctggc tgtggcaaat gtgactgcca
241 tggagtgaag ggacaaaagg gtgaaagagg cctcccgggg ttacaaggtg tcattgggtt
301 tcctggaatg caaggacctg aggggccaca gggaccacca ggacaaaagg gtgatactgg
361 agaaccagga ctacctggaa caaaagggac aagaggacct ccgggagcat ctggctaccc
421 tggaaaccca ggacttcccg gaattcctgg ccaagacggc ccgccaggcc ccccaggtat
481 tccaggatgc aatggcacaa agggggagag agggccgctc gggcctcctg gcttgcctgg
541 tttcgcagga aatcccggac caccaggctt accagggatg aagggtgatc caggtgagat
601 acttggccat gtgcccggga tgctgttgaa aggtgaaaga ggatttcccg gaatcccagg
661 gactccaggc ccaccaggac tgccagggct tcaaggtcct gttgggcctc caggatttac
721 cggaccacca ggtcccccag gccctcccgg ccctccaggt gaaaagggac aaatgggctt
781 aagttttcaa ggaccaaaag gtgacaaggg tgaccaaggg gtcagtgggc ctccaggagt
841 accaggacaa gctcaagttc aagaaaaagg agacttcgcc accaagggag aaaagggcca
901 aaaaggtgaa cctggatttc aggggatgcc aggggtcgga gagaaaggtg aacccggaaa
961 accaggaccc agaggcaaac ccggaaaaga tggtgacaaa ggggaaaaag ggagtcccgg
1021 ttttcctggt gaacccgggt acccaggact cataggccgc cagggcccgc agggagaaaa
1081 gggtgaagca ggtcctcctg gcccacctgg aattgttata ggcacaggac ctttgggaga
1141 aaaaggagag aggggctacc ctggaactcc ggggccaaga ggagagccag gcccaaaagg
1201 tttcccagga ctaccaggcc aacccggacc tccaggcctc cctgtacctg ggcaggctgg
1261 tgcccctggc ttccctggtg aaagaggaga aaaaggtgac cgaggatttc ctggtacatc
1321 tctgccagga ccaagtggaa gagatgggct cccgggtcct cctggttccc ctgggccccc
1381 tgggcagcct ggctacacaa atggaattgt ggaatgtcag cccggacctc caggtgacca
1441 gggtcctcct ggaattccag ggcagccagg atttataggc gaaattggag agaaaggtca
1501 aaaaggagag agttgcctca tctgtgatat agacggatat cgggggcctc ccgggccaca
1561 gggacccccg ggagaaatag gtttcccagg gcagccaggg gccaaggact ccctggcata
1621 acgggacagt cggggctccc tggccttcct ggacagcagg gggctcctgg gattcctggg
1681 tttccaggtt ccaagggaga aatgggcgtc atggggaccc ccgggcagcc gggctcacca
1741 ggaccagtgg gtgctcctgg attaccgggt gaaaaagggg accatggctt tccgggctcc
1801 tcaggaccca ggggagaccc tggcttgaaa ggtgataagg gggatgtcgg tctccctggc
1861 aagcctggct ccatggataa ggtggacatg ggcagcatga agggccagaa aggagaccaa
1921 ggagagaaag gacaaattgg accaattggt gagaagggat cccgaggaga ccctgggacc
1981 ccaggagtgc ctggaaagga cgggcaggca ggacagcctg ggcagccagg acctaaaggt
2041 gatccaggta taagtggaac cccaggtgct ccaggacttc cgggaccaaa aggatctgtt
2101 ggtggaatgg gcttgccagg aacacctgga gagaaaggtg tgcctggcat ccctggccca
2161 caaggttcac ctggcttacc tggagacaaa ggtgcaaaag gagagaaagg gcaggcaggc
2221 ccacctggca taggcatccc agggctgcga ggtgaaaagg gagatcaagg gatagcgggt
2281 ttcccaggaa gccctggaga gaagggagaa aaaggaagca ttgggatccc aggaatgcca
2341 gggtccccag gccttaaagg gtctcccggg agtgttggct atccaggaag tcctgggcta
2401 cctggagaaa aaggtgacaa aggcctccca ggattggatg gcatccctgg tgtcaaagga
2461 gaagcaggtc ttcctgggac tcctggcccc acaggcccag ctggccagaa aggggagcca
2521 ggcagtgatg gaatcccggg gtcagcagga gagaagggtg aaccaggtct accaggaaga
2581 ggattcccag ggtttccagg ggccaaagga gacaaaggtt caaagggtga ggtgggtttc
2641 ccaggattag ccgggagccc aggaattcct ggatccaaag gagagcaagg attcatgggt
2701 cctccggggc cccagggaca gccggggtta ccgggatccc caggccatgc cacggagggg
2761 cccaaaggag accgcggacc tcagggccag cctggcctgc caggacttcc gggacccatg
2821 gggcctccag ggcttcctgg gattgatgga gttaaaggtg acaaaggaaa tccaggctgg
2881 ccaggagcac ccggtgtccc agggcccaag ggagaccctg gattccaggg catgcctggt
2941 attggtggct ctccaggaat cacaggctct aagggtgata tggggcctcc aggagttcca
3001 ggatttcaag gtccaaaagg tcttcctggc ctccagggaa ttaaaggtga tcaaggcgat
3061 cacggcgtcc cgggagctaa aggtctcccg ggtcctcctg gccccccagg tccttacgac
3121 atcatcaaag gggagcccgg gctccctggt cctgagggcc ccccagggct gaaagggctt
3181 cagggactgc caggcccgaa aggccagcaa ggtgttacag gattggtggg tatacctgga
3241 cctccaggta ttcctgggtt tgacggtgcc cctggccaga aaggagagat gggacctgcc
3301 gggcctactg gtccaagagg atttccaggt ccaccaggcc ccgatgggtt gccaggatcc
3361 atggggcccc caggcacccc atctgttgat cacggcttcc ttgtgaccag gcatagtcaa
3421 acaatagatg acccacagtg tccttctggg accaaaattc tttaccacgg gtactctttg
3481 ctctacgtgc aaggcaatga acgggcccat ggccaggact tgggcacggc tggcagctgc
3541 ctgcgcaagt tcagcacaat gcccttcctg ttctgcaata ttaacaacgt gtgcaacttt
3601 gcatcacgaa atgactactc gtactggctg tccacccctg agcccatgcc catgtcaatg
3661 gcacccatca cgggggaaaa cataagacca tttattagta ggtgtgctgt gtgtgaggcg
3721 cctgccatgg tgatggccgt gcacagccag accattcaga tcccaccgtg ccccagcggg
3781 tggtcctcgc tgtggatcgg ctactctttt gtgatgcaca ccagcgctgg tgcagaaggc
3841 tctggccaag ccctggcgtc tcccggctcc tgcctggagg agtttagaag tgcgccattc
3901 atcgagtgtc acggccgtgg gacctgcaat tactacgcaa acgcttacag cttttggctc
3961 gccaccatag agaggagcga gatgttcaag aagcctacgc cgtccacctt gaaggcaggg
4021 gagctgcgca cgcacgtcag ccgctgccaa gtctgtatga gaagaacata atgaagcctg
4081 actcagctaa tgtcacaaca tggtgctact tcttcttctt tttgttaaca gcaacgaacc
4141 ctagaaatat atcctgtgta cctcactgtc caatatgaaa accgtaaagt gccttatagg
4201 aatttgcgta actaacacac cctgcttcat tgacctctac ttgctgaagg agaaaaagac
4261 agcgataagc tttcaatagt ggcataccaa atggcacttt tgatgaaata aaatatcaat
4321 attttctgca atccaatgca ctgatgtgtg aagtgagaac tccatcagaa aaccaaaggg
4381 tgctaggagg tgtgggtgcc ttccatactg tttgcccatt ttcattcttg tattataatt
4441 aattttctac ccccagagat aaatgtttgt ttatatcact gtctagctgt ttcaaaattt
4501 aggtcccttg gtctgtacaa ataatagcaa tgtaaaaatg gttttttgaa cctccaaatg
4561 gaattacaga ctcagtagcc atatcttcca accccccagt ataaatttct gtctttctgc
4621 tatgtgtggt actttgcagc tgcttttgca gaaatcaaaa ttttcctgtg gaataaagat
4681 ggtccaaaaa tagtcaaaaa ttaaatatat atatatatta gtaatttata tagatgtcag
4741 caattaggca gatcaaggtt tagtttaact tccactgtta aaataaagct tacatagttt
4801 tcttcctttg aaagactgtg ctgtccttta acataggttt ttaaagacta ggatattgaa
4861 tgtgaaacat ccgttttcat tgttcacttc taaaccaaaa attatgtgtt gccaaaacca
4921 aacccaggtt catgaatatg gtgtctatta tagtgaaaca tgtactttga gcttattgtt
4981 tttattctgt attaaatatt ttcagggttt taaacactaa tcacaaactg aatgacttga
5041 cttcaaaagc aacaacctta aaggccgtca tttcattagt attcctcatt ctgcatcctg
5101 gcttgaaaaa cagctctgtt gaatcacagt atcagtattt tcacacgtaa gcacattcgg
5161 gccatttccg tggtttctca tgagctgtgt tcacagacct cagcagggca tcgcatggac
5221 cgcaggaggg cagattcgga ccactaggcc tgaaatgaca tttcactaaa agtctccaaa
5281 acatttctaa gactactaag gccttttatg taatttcttt aaatgtgtat ttcttaagaa
5341 ttcaaatttg taataaaact atttgtataa aaattaagct tttattaatt tgttgctagt
5401 attgccacag acgcattaaa agaaacttac tgcacaagct gctaataaat ttgtaagctt
5461 tgc
//