LOCUS       AB209645                5681 bp    mRNA    linear   HUM 17-NOV-2007
DEFINITION  Homo sapiens mRNA for alpha 1 type VII collagen precursor variant
            protein.
ACCESSION   AB209645
VERSION     AB209645.1
KEYWORDS    FLI_CDNA.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 5681)
  AUTHORS   Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
            Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
            Contact:Osamu Ohara
            Kazusa DNA Research Institute, Department of Human Gene Research;
            2-6-7   Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
            URL    :http://protein.gsc.riken.go.jp/
REFERENCE   2
  AUTHORS   Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
            Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
  TITLE     Homo sapiens protein coding cDNA
  JOURNAL   Published Only in Database(2005)
COMMENT     This work was supported in part by the National Project on Protein
            Structural and Functional Analysis , Ministry of Education,
            Culture , Sports, Science and Technology of Japan.
            Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
            RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
            Yokohama 230-0045, Japan. 
            URL: http://protein.gsc.riken.go.jp/
FEATURES             Location/Qualifiers
     source          1..5681
                     /clone="sh06218"
                     /db_xref="H-InvDB:HIT000329580"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="this clone is also named as hsk003001872"
                     /note="vector:pBluescriptII SK plus"
                     /organism="Homo sapiens"
                     /tissue_type="spleen"
     CDS             <1..3084
                     /codon_start=1
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /note="Start codon is not identified."
                     /product="alpha 1 type VII collagen precursor variant"
                     /protein_id="BAD92882.1"
                     /translation="GLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDR
                     GERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGS
                     PGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPE
                     GPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGL
                     VLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVG
                     EKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGD
                     RGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGP
                     PGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLP
                     GLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREG
                     RDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLP
                     GERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRGPKGDSG
                     EQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPG
                     LPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGP
                     GLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERG
                     MAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGR
                     GLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPG
                     VPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRG
                     LPGPRGEKGEAGRAGEPGDPGEDVSPGPRQGRAWPEECDGGHKGPLLGRGTCLSP"
BASE COUNT         1051 a         1596 c         2105 g          929 t
ORIGIN      
        1 gggcttcctg ggcggaaagg ggaccctgga ccatcgggcc cccctggacc tcgtggacca
       61 ctgggggacc caggaccccg tggcccccca gggcttcctg gaacagccat gaagggtgac
      121 aaaggcgatc gtggggagcg gggtccccct ggaccaggtg aaggtggcat tgctcctggg
      181 gagcctgggc tgccgggtct tcccggaagc cctggacccc aaggccccgt tggcccccct
      241 ggaaagaaag gagaaaaagg tgactctgag gatggagctc caggcctccc aggacaacct
      301 gggtctccgg gtgagcaggg cccacgggga cctcctggag ctattggccc caaaggtgac
      361 cggggctttc cagggcccct gggtgaggct ggagagaagg gcgaacgtgg acccccaggc
      421 ccagcgggat cccgggggct gccaggggtt gctggacgtc ctggagccaa gggtcctgaa
      481 gggccaccag gacccactgg ccgccaagga gagaaggggg agcctggtcg ccctggggac
      541 cctgcagtgg tgggacctgc tgttgctgga cccaaaggag aaaagggaga tgtggggccc
      601 gctgggccca gaggagctac cggagtccaa ggggaacggg gcccacccgg cttggttctt
      661 cctggagacc ctggccccaa gggagaccct ggagaccggg gtcccattgg ccttactggc
      721 agagcaggac ccccaggtga ctcagggcct cctggagaga agggagaccc tgggcggcct
      781 ggccccccag gacctgttgg cccccgagga cgagatggtg aagttggaga gaaaggtgac
      841 gagggtcctc cgggtgaccc gggtttgcct ggaaaagcag gcgagcgtgg ccttcggggg
      901 gcacctggag ttcgggggcc tgtgggtgaa aagggagacc agggagatcc tggagaggat
      961 ggacgaaatg gcagccctgg atcatctgga cccaagggtg accgtgggga gccgggtccc
     1021 ccaggacccc cgggacggct ggtagacaca ggacctggag ccagagagaa gggagagcct
     1081 ggggaccgcg gacaagaggg tcctcgaggg cccaagggtg atcctggcct ccctggagcc
     1141 cctggggaaa ggggcattga agggtttcgg ggacccccag gcccacaggg ggacccaggt
     1201 gtccgaggcc cagcaggaga aaagggtgac cggggtcccc ctgggctgga tggccggagc
     1261 ggactggatg ggaaaccagg agccgctggg ccctctgggc cgaatggtgc tgcaggcaaa
     1321 gctggggacc cagggagaga cgggcttcca ggcctccgtg gagaacaggg cctccctggc
     1381 ccctctggtc cccctggatt accgggaaag ccaggcgagg atggcaaacc tggcctgaat
     1441 ggaaaaaacg gagaacctgg ggaccctgga gaagacggga ggaagggaga gaaaggagat
     1501 tcaggcgcct ctgggagaga aggtcgtgat ggccccaagg gtgagcgtgg agctcctggt
     1561 atccttggac cccaggggcc tccaggcctc ccagggccag tgggccctcc tggccagggt
     1621 tttcctggtg tcccaggagg cacgggcccc aagggtgacc gtggggagac tggatccaaa
     1681 ggggagcagg gcctccctgg agagcgtggc ctgcgaggag agcctggaag tgtgccgaat
     1741 gtggatcggt tgctggaaac tgctggcatc aaggcatctg ccctgcggga gatcgtggag
     1801 acctgggatg agagctctgg tagcttcctg cctgtgcccg aacggcgtcg aggccccaag
     1861 ggggactcag gcgaacaggg ccccccaggc aaggagggcc ccatcggctt tcctggagaa
     1921 cgcgggctga agggcgaccg tggagaccct ggccctcagg ggccacctgg tctggccctt
     1981 ggggagaggg gcccccccgg gccttccggc cttgccgggg agcctggaaa gcctggtatt
     2041 cccgggctcc caggcagggc tgggggtgtg ggagaggcag gaaggccagg agagagggga
     2101 gaacggggag agaaaggaga acgtggagaa cagggcagag atggccctcc tggactccct
     2161 ggaacccctg ggccccccgg accccctggc cccaaggtgt ctgtggatga gccaggtcct
     2221 ggactctctg gagaacaggg accccctgga ctcaagggtg ctaaggggga gccgggcagc
     2281 aatggtgacc aaggtcccaa aggagacagg ggtgtgccag gcatcaaagg agaccgggga
     2341 gagcctggac cgaggggtca ggacggcaac ccgggtctac caggagagcg tggtatggct
     2401 gggcctgaag ggaagccggg tctgcagggt ccaagaggcc cccctggccc agtgggtggt
     2461 catggagacc ctggaccacc tggtgccccg ggtcttgctg gccctgcagg accccaagga
     2521 ccttctggcc tgaaggggga gcctggagag acaggacctc caggacgggg cctgactgga
     2581 cctactggag ctgtgggact tcctggaccc cccggccctt caggccttgt gggtccacag
     2641 gggtctccag gtttgcctgg acaagtgggg gagacaggga agccgggagc cccaggtcga
     2701 gatggtgcca gtggaaaaga tggagacaga gggagccctg gtgtgccagg gtcaccaggt
     2761 ctgcctggcc ctgtcggacc taaaggagaa cctggcccca cgggggcccc tggacaggct
     2821 gtggtcgggc tccctggagc aaagggagag aagggagccc ctggaggcct tgctggagac
     2881 ctggtgggtg agccgggagc caaaggtgac cgaggactgc cagggccgcg aggcgagaag
     2941 ggtgaagctg gccgtgcagg ggagcccgga gaccctgggg aagatgtgag tccggggcct
     3001 aggcaagggc gagcctggcc tgaggagtgt gatggcgggc ataaggggcc actcttgggc
     3061 cggggcacat gtctgagccc ctgagtcggg ctgcatgtcc caacatccag gagcctgctc
     3121 tctggatcac agggagccac acactgtcgg cttccacact ctgagctctg ggggccctgt
     3181 cttggcttct gtgtgcccat ccttggtctg tttctcacca catctgggca cacgtgtgct
     3241 ctggtctgat ctcccagatc ccaggacaca cctgagttct tgtgaacctc tccttggtcc
     3301 tgtgtttaca atcctccttt cccctgcccc tggctgccag cgttcagcct gtggccatgc
     3361 ctgctctacc cgggagtgga cgtgttgggg ttcccctctg agcgcccgtg tgtccgcact
     3421 cacgtctgtg gagccagatg tctgcactcg cgtgtgggct ccctgtgcct gtgccatgcc
     3481 tgaactccca cctgtctatg gtagtatctg agcgtccctc tgtctgtgct gtcctgagat
     3541 aggccatggt catgtctgag ctcctgtgag ccaattcttg gtcgcatgtc tgagttccca
     3601 tgtgttcatg gtcacatcag aactcccctg ggaatatttt cagcccgtgt ctgaactctg
     3661 tgctcatgtt cctaccctct caaatgctgt ttgctgggtt ttcttagggt cagaaagggg
     3721 ctccaggacc caaaggtttc aagggtgacc caggagtcgg ggtcccgggc tcccctgggc
     3781 ctcctggccc tccaggtgtg aagggagatc tgggcctccc tggcctgccc ggtgctcctg
     3841 gtgttgttgg gttcccgggt cagacaggcc ctcgaggaga gatgggtcag ccaggcccta
     3901 gtggagagcg gggtctggca ggccccccag ggagagaagg aatcccagga cccctggggc
     3961 cacctggacc accggggtca gtgggaccac ctggggcctc tggactcaaa ggagacaagg
     4021 gagaccctgg agtagggctg cctgggcccc gaggcgagcg tggggagcca ggcatccggg
     4081 gtgaagatgg ccgccccggc caggagggac cccgaggact cacggggccc cctggcagca
     4141 ggggagagcg tggggagaag ggtgatgttg ggagtgcagg actaaagggt gacaagggag
     4201 actcagctgt gatcctgggg cctccaggcc cacggggtgc caagggggac atgggtgaac
     4261 gagggcctcg gggcttggat ggtgacaaag gacctcgggg agacaatggg gaccctggtg
     4321 acaagggcag caagggagag cctggtgaca agggctcagc cgggttgcca ggactgcgtg
     4381 gactcctggg accccagggt caacctggtg cagcagggat ccctggtgac ccgggatccc
     4441 caggaaagga tggagtgcct ggtatccgag gagaaaaagg agatgttggc ttcatgggtc
     4501 cccggggcct caagggtgaa cggggagtga agggagcctg tggccttgat ggagagaagg
     4561 gagacaaggg agaagctggt cccccaggcc gccccgggct ggcaggacac aaaggagaga
     4621 tgggggagcc tggtgtgccg ggccagtcgg gggcccctgg caaggagggc ctgatcggtc
     4681 ccaaggggcc acctggcagt gttggtccca gaggccccga aggacttcag ggccagaagg
     4741 gtgagcgagg tccccccgga gagagagtgg tgggggctcc tggggtccct ggagctcctg
     4801 gcgagagagg ggagcagggg cggccagggc ctgccggtcc tcgaggcgag aagggagaag
     4861 ctgcactgac ggaggatgac atccggggct ttgtgcgcca agagatgagt cagcactgtg
     4921 cctgccaggg ccagttcatc gcatctggat cacgacccct ccctagttat gctgcagaca
     4981 ctgccggctc ccagctccat gctgtgcctg tgctccgcgt ctctcatgca gaggaggaag
     5041 agcgggtacc ccctgaggat gatgagtact ctgaatactc cgagtattct gtggaggagt
     5101 accaggaccc tgaagctcct tgggatagtg atgacccctg ttccctgcca ctggatgagg
     5161 gctcctgcac tgcctacacc ctgcgctggt accatcgggc tgtgacaggc agcacagagg
     5221 cctgtcaccc ttttgtctat ggtggctgtg gagggaatgc caaccgtttt gggacccgtg
     5281 aggcctgcga gcgccgctgc ccaccccggg tggtccagag ccaggggaca ggtactgccc
     5341 aggactgagg cccagataat gagctgagat tcagcatccc ctggaggagt cggggtctca
     5401 gcagaacccc actgtccctc cccttggtgc tagaggcttg tgtgcacgtg agcgtgcgtg
     5461 tgcacgtccg ttatttcagt gacttggtcc cgtgggtcta gccttccccc ctgtggacaa
     5521 acccccattg tggctcctgc caccctggca gatgactcac tgtggggggg tggctgtggg
     5581 cagtgagcgg atgtgactgg cgtctgaccc gccccttgac ccaagcctgt gatgacatgg
     5641 tgctgattct ggggggcatt aaagctgctg ttttaaaagg c
//