LOCUS AB209577 4565 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for major histocompatibility complex, class II,
DM beta precursor variant protein.
ACCESSION AB209577
VERSION AB209577.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4565)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..4565
/clone="sj01723"
/db_xref="H-InvDB:HIT000329512_08"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003001736"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="spleen"
CDS <151..609
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="major histocompatibility complex, class II, DM
beta precursor variant"
/protein_id="BAD92814.1"
/translation="TPGIFTEQSMITFLPLLLGLSLGCTGAGGFVAHVESTCLLDDAG
TPKDFTYCISFNKDLLTCWDPEENKMAPCEFGVLNSLANVLSQHLNQKDTLMQRLRNG
LQNCATHTQPFWGSLTNRTREERGVQRGYQEVQLGGQAREDPTVAQGFEI"
BASE COUNT 1228 a 907 c 1256 g 1174 t
ORIGIN
1 gctgggtatc cccacatcac tcatttgggg ggtcaaggga cccgggcaat atagtattct
61 gctcagtgtc tggagatcat ctacccaggc tggggcttct gggacaggcg aggacccacg
121 gaccctggaa gagctggtcc aggggactga actcccggca tctttacaga gcagagcatg
181 atcacattcc tgccgctgct gctggggctc agcctgggct gcacaggagc aggtggcttc
241 gtggcccatg tggaaagcac ctgtctgttg gatgatgctg ggactccaaa ggatttcaca
301 tactgcatct ccttcaacaa ggatctgctg acctgctggg atccagagga gaataagatg
361 gccccttgcg aatttggggt gctgaatagc ttggcgaatg tcctctcaca gcacctcaac
421 caaaaagaca ccctgatgca gcgcttgcgc aatgggcttc agaattgtgc cacacacacc
481 cagcccttct ggggatcact gaccaacagg acacgtgagg agagaggggt gcagaggggc
541 taccaggaag tgcagttagg agggcaggcc agggaggatc ccacagtggc ccaggggttt
601 gagatttgag cagcaaataa gagaaaatgt gtggatctga aatgtagaaa gacggaggat
661 tgaacctcaa ggggaacaag gtggctgacg tgagtggaac aggagtaaag aaggggaggt
721 gaggcttgaa ccgcgaggtg ccatgtgggg agcttatgca gaggctgggg catctcagga
781 tgcataccca agatgttctt gccttgttat cccagatttt gatgttccag atctgatgtg
841 ggcccaggca tgggaatatt tggaatccca ggggattctg acacatgctt tttctcaccc
901 ttaaactctt gcattgacaa tggcttgaag tttgtgaaag taaacttgaa gatctccaca
961 gtacagaaca gtgtgtctca agggtggttt ctgaaccacc tttctcagaa ttgcctggag
1021 gaggtgcttg ttaaagatgc aagcccctta gtaccactcc agatctgttg aaagaaagta
1081 tctggggata cagcctagga aatctgcatt ttaacataat tccttggatt tttatttaag
1141 attgtgtttg aaaaatgtca agacagaggc aagcaagagg atcacctagg agagtaaatt
1201 agtaaaagat ggcagtatta gcaatctcat tagtttgact acattcattc caaatttaag
1261 agtgagtcct aagttaggct tgtttccttg aactatgtga ggagaaaaag ctttaactag
1321 caaaagaacg tattaaacaa gatttggaga aaaattcctt ttccacctta aaaaaaccca
1381 atgtacaact ctggattact cttagcttcc ttatttcaaa tactttccag tttatgtact
1441 tgaaataaat acaacaactt ctagaacagc ttgcagttca gatctggctt ttactaattg
1501 taatcaaaca taattctgga ggaggaaaga aagaaagggg caatgaagga atgggagaga
1561 agaaagagta atgcaggaat acattctaac ggttcccctt caaggggcag catggcagag
1621 ggggctgggg tggaaagtgg gttgcaaaat ctacgaagag ttgcgatagg gaagaaacca
1681 ggttgaggaa gcagccagaa tgtcaccctc cttcctaaac atgttttttt ctcctatgca
1741 gggccaccat ctgtgcaagt agccaaaacc actcctttta acacgaggga gcctgtgatg
1801 ctggcctgct atgtgtgggg cttctatcca gcagaagtga ctatcacgtg gaggaagaac
1861 gggaagcttg tcatgcctca cagcagtgcg cacaagactg cccagcccaa tggagactgg
1921 acataccaga ccctctccca tttagcctta accccctctt acggggacac ttacacctgt
1981 gtggtagagc acattggggc tcctgagccc atccttcggg actggagtaa gtgtatggca
2041 gatggatgga attagggtca aagcagagaa aatgagatgt ggatcgatac atggtacatg
2101 gtagacagcg aagtgctgaa aatggggact gagtctggag gaacttacgg ggggcttagg
2161 accagaatgg ggaaatggga taaagaaatg gaaatattta ggttggtgca aaagtaattg
2221 cagtttttgc cattactttc agtggcaaaa accgcaatta cttttgcacc agtttaatat
2281 ttagtctgtg ctattgctgc tctggtggtg tggttgatgt tgctgcgtct atgtttgagg
2341 gtgagagggg agcgtgcttg ctttgaaatg aggatgtaaa tttggcaatc atattttcag
2401 aaccccaaat tgtaatacac tattctagcc tccttagatt tcaactattc tggtgccaga
2461 agcagatggg agctgaagga atgatgaagg ttgaagaagg ggggcttttc ttggtgtggg
2521 gcagtactgc atttggcctg ctctaccaag catacgggag tagtaaagcc acggctggca
2581 gaccatttgg catgcatgct caggggccag tggataaaga attacttaca gttcaaacac
2641 tgtttgaact cagtgtcggg agtagttaaa ggtatcgtga gaagttgcac acagctttgg
2701 ggactcttgg aaaagaaaga ggaagaaatg aggaagagga agggtgtcta caaagggcca
2761 gagaacagga tctcagatca gctgctgtaa ccaggtttcc ccttgtggga agtgttgttt
2821 cttgctgggc agttgggaag ggaatggaga acagagaaga gagtggaaat cacatgctca
2881 cttgaacttt cctggggaac gtctcctcac agcgtgcaca agagcctccc tttagaaatg
2941 gagtgttcat tttatcatgg gaaaagaatc tgagtgggac atgattcaga acaggaccgg
3001 cccaaggaag tgcaggggct gtggagtggg atggagacaa gctctgaaag gacacatggg
3061 agatctagat gtaggaggta cacaagtagt aggataactc acaggatgga tccactggag
3121 gttaagacat gtggtaagac agtgtaatag gaagctgctc agttggagaa agtaaggaag
3181 caaacattgt taccgtgggg gcaatggaga ggacagtgag gagcccttta tcctgataag
3241 ggtggctttg gggtaaagga aggaaagagg atgccttgag aggccccact gtattagaga
3301 ggacctggaa gccaggatgc taattctggg gagatgggtt ccccaggctt actctaggag
3361 tagaggtcca tgggacgagg gtttgatttg agaaagatca ttttcttggg agtgggtggt
3421 gtgagctaga cccttggagc tgggataaag gaccttttaa cccactgaga ggtggctgca
3481 ataaatggaa ttgccctggg ggtgagcaac agaaactggg tcaagtaagt ttctattttt
3541 tgcagcacct gggctgtccc ccatgcagac cctgaaggtt tctgtgtctg cagtgactct
3601 gggcctgggc ctcatcatct tctctcttgg tgtgatcagc tggcggagag ctggccactc
3661 tagtgagtga ctcgctgaac tcccatcccc actcttggtc ccactctctg cttactttct
3721 gtttgtgatt aactctctcc ttcctactgc atttgctatg aatactgcta gatattttca
3781 tccacaaaga ctggtataat caagtatctt cctctcttag gttacactcc tcttcctggg
3841 tccaattatt cagaaggtaa catctctgtt ggtctgtttc cctacttgcc ctttggtagg
3901 ggtgcgggtt agaggggtca gtgttgggtt caactaatct tgattattat atgggtgagc
3961 ttccatgagg atctaggcaa gggcatgatt taagctgcca ttgctaggat taagagcagg
4021 aaggagcatc ctcctcttct accaagtggg atgtctgtgg agaggaggct gaaggtgctt
4081 cctttgtatt agttgttggt gccctggagt tttcagtatc actgtattaa ggcatgggat
4141 ggttacagtg acaaacgatg ggggcaagtt gggttgaagc ctcattatct cccttttatt
4201 tattctgtag gatggcacat ttcctagagg cagaatccta caacttccac tccaagtgag
4261 aaggagattc aaactcaatg atgctaccat gcctctccaa catcttcaac cccctgacat
4321 tatcttggat cctatggttt ctccatccaa ttctttgaat ttcccagtct cccctatgta
4381 aaacttagca acttggggga cctcattcct gggactatgc tgtaaccaaa ttattgtcca
4441 aggctatatt tctgggatga atataatctg aggaagggag ttaaagaccc tcctggggct
4501 ctcagtgtgc catagaggac agcaactggt gattgtttca gagaaataaa ctttggtgga
4561 aatat
//