LOCUS AB209413 5142 bp mRNA linear HUM 12-SEP-2009
DEFINITION Homo sapiens mRNA for DNA (cytosine-5-)-methyltransferase 1
variant, partial cds.
ACCESSION AB209413
VERSION AB209413.2
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5142)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..5142
/clone="fh25931"
/db_xref="H-InvDB:HIT000329348"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003001396"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1..4822
/codon_start=2
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="DNA (cytosine-5-)-methyltransferase 1 variant"
/protein_id="BAD92650.1"
/translation="AVPAISLPDDVRRRLKDLERDSLTEKECVKEKLNLLHEFLQTEI
KNQLCDLETKLRKEELSEEGYLAKVKSLLNKDLSLENGAHAYNREVNGRLENGNQARS
EARRVGMADANSPPKPLSKPRTPRRSKSDGEAKPEPSPSPRITRKSTRQTTITSHFAK
GPAKRKPQEESERAKSDESIKEEDKDQDEKRRRVTSRERVARPLPAEEPERAKSGTRT
EKEEERDEKEEKRLRSQTKEPTPKQKLKEEPDREARAGVQADEDEDGDEKDEKKHRSQ
PKDLAAKRRPEEKEPEKVNPQISDEKDEDEKEEKRRKTTPKEPTEKKMARAKTVMNSK
THPPKCIQCGQYLDDPDLKYGQHPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQH
KLTCFSVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINE
WWITGFDGGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSD
STYEDLINKIETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGDSDEQPIFLTP
CMRDLIKLAGVTLGQRRAQARRQTIRHSTREKDRGPTKATTTKLVYQIFDTFFAEQIE
KDDREDKENAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMA
MKEADDDEEVDDNIPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCID
AETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVLGATSDP
LELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMDPESLLEGDDGKTYFYQLWY
DQDYARFESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSAT
KNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNL
DAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLY
WSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPN
HARSPGNKGKGKGKGKGKPKSQACEPSEPEIEIKLPKLRTLDVFSGCGGLSEGFHQAG
ISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDV
EMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFK
RSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHV
FAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEISYNGE
PQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDG
TMARKLRYTHHDRKNGRSSSGALRGVCSCVEGGSSGKACDPAARQFNTLIPWCLPHTG
NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDT
YRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCMLAKARESASAKIKEEEAAKD"
BASE COUNT 1366 a 1378 c 1431 g 967 t
ORIGIN
1 ggccgtcccg gccatctcgc tgcccgacga tgtccgcagg cggctcaaag atttggaaag
61 agacagctta acagaaaagg aatgtgtgaa ggagaaattg aatctcttgc acgaatttct
121 gcaaacagaa ataaagaatc agttatgtga cttggaaacc aaattacgta aagaagaatt
181 atccgaggag ggctacctgg ctaaagtcaa atccctttta aataaagatt tgtccttgga
241 gaacggtgct catgcttaca accgggaagt gaatggacgt ctagaaaacg ggaaccaagc
301 aagaagtgaa gcccgtagag tgggaatggc agatgccaac agccccccca aacccctttc
361 caaacctcgc acgcccagga ggagcaagtc cgatggagag gctaagcctg aaccttcacc
421 tagccccagg attacaagga aaagcaccag gcaaaccacc atcacatctc attttgcaaa
481 gggccctgcc aaacggaaac ctcaggaaga gtctgaaaga gccaaatcgg atgagtccat
541 caaggaagaa gacaaagacc aggatgagaa gagacgtaga gttacatcca gagaacgagt
601 tgctagaccg cttcctgcag aagaacctga aagagcaaaa tcaggaacgc gcactgaaaa
661 ggaagaagaa agagatgaaa aagaagaaaa gagactccga agtcaaacca aagaaccaac
721 acccaaacag aaactgaagg aggagccgga cagagaagcc agggcaggcg tgcaggctga
781 cgaggacgaa gatggagacg agaaagatga gaagaagcac agaagtcaac ccaaagatct
841 agctgccaaa cggaggcccg aagaaaaaga acctgaaaaa gtaaatccac agatttctga
901 tgaaaaagac gaggatgaaa aggaggagaa gagacgcaaa acgaccccca aagaaccaac
961 ggagaaaaaa atggctcgcg ccaaaacagt catgaactcc aagacccacc ctcccaagtg
1021 cattcagtgc gggcagtacc tggacgaccc tgacctcaaa tatgggcagc acccaccaga
1081 cgcggtggat gagccacaga tgctgacaaa tgagaagctg tccatctttg atgccaacga
1141 gtctggcttt gagagttatg aggcgcttcc ccagcacaaa ctgacctgct tcagtgtgta
1201 ctgtaagcac ggtcacctgt gtcccatcga caccggcctc atcgagaaga atatcgaact
1261 cttcttttct ggttcagcaa aaccaatcta tgatgatgac ccgtctcttg aaggtggtgt
1321 taatggcaaa aatcttggcc ccataaatga atggtggatc actggctttg atggaggtga
1381 aaaggccctc atcggcttca gcacctcatt tgccgaatac attctgatgg atcccagtcc
1441 cgagtatgcg cccatatttg ggctgatgca ggagaagatc tacatcagca agattgtggt
1501 ggagttcctg cagagcaatt ccgactcgac ctatgaggac ctgatcaaca agatcgagac
1561 cacggttcct ccttctggcc tcaacttgaa ccgcttcaca gaggactccc tcctgcgaca
1621 cgcgcagttt gtggtggagc aggtggagag ttatgacgag gccggggaca gtgatgagca
1681 gcccatcttc ctgacgccct gcatgcggga cctgatcaag ctggctgggg tcacgctggg
1741 acagaggcga gcccaggcga ggcggcagac catcaggcat tctaccaggg agaaggacag
1801 gggacccacg aaagccacca ccaccaagct ggtctaccag atcttcgata ctttcttcgc
1861 agagcaaatt gaaaaggatg acagagaaga caaggagaac gcctttaagc gccggcgatg
1921 tggcgtctgt gaggtgtgtc agcagcctga gtgtgggaaa tgtaaagcct gcaaggacat
1981 ggttaaattt ggtggcagtg gacggagcaa gcaggcttgc caagagcgga ggtgtcccaa
2041 tatggccatg aaggaggcag atgacgatga ggaagtcgat gataacatcc cagagatgcc
2101 gtcacccaaa aaaatgcacc aggggaagaa gaagaaacag aacaagaatc gcatctcttg
2161 ggtcggagaa gccgtcaaga ctgatgggaa gaagagttac tataagaagg tgtgcattga
2221 tgcggaaacc ctggaagtgg gggactgtgt ctctgttatt ccagatgatt cctcaaaacc
2281 gctgtatcta gcaagggtca cggcgctgtg ggaggacagc agcaacgggc agatgtttca
2341 cgcccactgg ttctgcgctg ggacagacac agtcctcggg gccacgtcgg accctctgga
2401 gctgttcttg gtggatgaat gtgaggacat gcagctttca tatatccaca gcaaagtgaa
2461 agtcatctac aaagccccct ccgaaaactg ggccatggag ggaggcatgg atcccgagtc
2521 cctgctggag ggggacgacg ggaagaccta cttctaccag ctgtggtatg atcaagacta
2581 cgcgagattc gagtcccctc caaaaaccca gccaacagag gacaacaagt tcaaattctg
2641 tgtgagctgt gcccgtctgg ctgagatgag gcaaaaagaa atccccaggg tcctggagca
2701 gctcgaggac ctggatagcc gggtcctcta ctactcagcc accaagaacg gcatcctgta
2761 ccgagttggt gatggtgtgt acctgccccc tgaggccttc acgttcaaca tcaagctgtc
2821 cagtcccgtg aaacgcccac ggaaggagcc cgtggatgag gacctgtacc cagagcacta
2881 ccggaaatac tccgactaca tcaaaggcag caacctggat gcccctgagc cctaccgaat
2941 tggccggatc aaagagatct tctgtcccaa gaagagcaac ggcaggccca atgagactga
3001 catcaaaatc cgggtcaaca agttctacag gcctgagaac acccacaagt ccactccagc
3061 gagctaccac gcagacatca acctgctcta ctggagcgac gaggaggccg tggtggactt
3121 caaggctgtg cagggccgct gcaccgtgga gtatggggag gacctgcccg agtgcgtcca
3181 ggtgtactcc atgggcggcc ccaaccgctt ctacttcctc gaggcctata atgcaaagag
3241 caaaagcttt gaagatcctc ccaaccatgc ccgtagccct ggaaacaaag ggaagggcaa
3301 gggaaaaggg aagggcaagc ccaagtccca agcctgtgag ccgagcgagc cagagataga
3361 gatcaagctg cccaagctgc ggaccctgga tgtgttttct ggctgcgggg ggttgtcgga
3421 gggattccac caagcaggca tctctgacac gctgtgggcc atcgagatgt gggaccctgc
3481 ggcccaggcg ttccggctga acaaccccgg ctccacagtg ttcacagagg actgcaacat
3541 cctgctgaag ctggtcatgg ctggggagac caccaactcc cgcggccagc ggctgcccca
3601 gaagggagac gtggagatgc tgtgcggcgg gccgccctgc cagggcttca gcggcatgaa
3661 ccgcttcaat tcgcgcacct actccaagtt caaaaactct ctggtggttt ccttcctcag
3721 ctactgcgac tactaccggc cccggttctt cctcctggag aatgtcagga actttgtctc
3781 cttcaagcgc tccatggtcc tgaagctcac cctccgctgc ctggtccgca tgggctatca
3841 gtgcaccttc ggcgtgctgc aggccggtca gtacggcgtg gcccagacta ggaggcgggc
3901 catcatcctg gccgcggccc ctggagagaa gctccctctg ttcccggagc cactgcacgt
3961 gtttgctccc cgggcctgcc agctgagcgt ggtggtggat gacaagaagt ttgtgagcaa
4021 cataaccagg ttgagctcgg gtcctttccg gaccatcacg gtgcgagaca cgatgtccga
4081 cctgccggag gtgcggaatg gagcctcggc actggagatc tcctacaacg gggagcctca
4141 gtcctggttc cagaggcagc tccggggcgc acagtaccag cccatcctca gggaccacat
4201 ctgtaaggac atgagtgcat tggtggctgc ccgcatgcgg cacatcccct tggccccagg
4261 gtcagactgg cgcgatctgc ccaacatcga ggtgcggctc tcagacggca ccatggccag
4321 gaagctgcgg tatacccacc atgacaggaa gaacggccgc agcagctctg gggccctccg
4381 tggggtctgc tcctgcgtgg aaggtgggtc ctccggcaaa gcctgcgacc ccgcagccag
4441 gcagttcaac accctcatcc cctggtgcct gccccacacc gggaaccggc acaaccactg
4501 ggctggcctc tatggaaggc tcgagtggga cggcttcttc agcacaaccg tcaccaaccc
4561 cgagcccatg ggcaagcagg gccgcgtgct ccacccagag cagcaccgtg tggtgagcgt
4621 gcgggagtgt gcccgctccc agggcttccc tgacacctac cggctcttcg gcaacatcct
4681 ggacaagcac cggcaggtgg gcaatgccgt gccaccgccc ctggccaaag ccattggctt
4741 ggagatcaag ctttgtatgt tggccaaagc ccgagagagt gcctcagcta aaataaagga
4801 ggaggaagct gctaaggact agttctgccc tcccgtcacc cctgtttctg gcaccaggaa
4861 tccccaacat gcactgatgt tgtgttttta acatgtcaat ctgtccgttc acatgtgtgg
4921 tacatggtgt ttgtggcctt ggctgacatg aagctgttgt gtgaggttcg cttatcaact
4981 aatgatttag tgatcaaatt gtgcagtact ttgtgcattc tggattttaa aagtttttta
5041 ttatgcatta tatcaaatct accactgtat gagtggaaat taagacttta tgtagttttt
5101 atatgttgta atatttcttc aaataaatct ctcctataaa cc
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