LOCUS AB209375 5176 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for ephrin receptor EphA5 isoform a variant
protein.
ACCESSION AB209375
VERSION AB209375.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5176)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..5176
/clone="fh18433"
/db_xref="H-InvDB:HIT000329310"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003001321"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <715..3768
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="ephrin receptor EphA5 isoform a variant"
/protein_id="BAD92612.1"
/translation="AARDSGTGGGSEKMRGSGPRGAGRRRPPSGGGDTPITPASLAGC
YSAPRRAPLWTCLLLCAALRTLLASPSNEVNLLDSRTVMGDLGWIAFPKNGWEEIGEV
DENYAPIHTYQVCKVMEQNQNNWLLTSWISNEGASRIFIELKFTLRDCNSLPGGLGTC
KETFNMYYFESDDQNGRNIKENQYIKIDTIAADESFTELDLGDRVMKLNTEVRDVGPL
SKKGFYLAFQDVGACIALVSVRVYYKKCPSVVRHLAVFPDTITGADSSQLLEVSGSCV
NHSVTDEPPKMHCSAEGEWLVPIGKCMCKAGYEEKNGTCQVCRPGFFKASPHIQSCGK
CPPHSYTHEEASTSCVCEKDYFRRESDPPTMACTRPPSAPRNAISNVNETSVFLEWIP
PADTGGRKDVSYYIACKKCNSHAGVCEECGGHVRYLPRQSGLKNTSVMMVDLLAHTNY
TFEIEAVNGVSDLSPGARQYVSVNVTTNQAAPSPVTNVKKGKIAKNSISLSWQEPDRP
NGIILEYEIKYFEKDQETSYTIIKSKETTITAEGLKPASVYVFQIRARTAAGYGVFSR
RFEFETTPVSVAASSDQSQIPVIAVSVTVGVILLAVVIGVLLSGSCCECGCGRASSLC
AVAHPSLIWRCGYSKAKQDPEEEKMHFHNGHIKLPGVRTYIDPHTYEDPNQAVHEFAK
EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEAS
IMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGI
SAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI
RWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSP
MDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRNPSSLKTLVNASCRVSNLLAE
HSPLGSGAYRSVGEWLEAIKMGRYTEIFMENGYSSMDAVAQVTLE"
BASE COUNT 1450 a 1139 c 1146 g 1441 t
ORIGIN
1 ccagacacag caggagcgcg ccttggcggt gcagtttcaa cctcgacttc gcagccgcgc
61 acacaccgcc tgctccccga gcagcgggaa ccgcagcagc tcctgggccg ccgcagcgca
121 gctccgcgct cctaccggcc ggcagccgtc agtccctccc ctcttcagca ctcagcccgc
181 agctatttcc ttctgccagt ctctttgaac tctggatctt tgcttttgct cgctgctctc
241 ctgtttttca ttctccacat tttctcaagt cctctttctt tatccttagc caccctgctt
301 ttttcctcct tttttaaaaa atcggagatt tcgtcttaaa atgatttgtc ttccttacct
361 tcgtccattt caacactgaa ggctgcaaag aaccttcacc tttcccctag tggtatttaa
421 aaattctcaa tccgtaaaaa gtctttttga aaggcaaagg aacaggaccc aggaccctct
481 cgacaccctt gatccgagtc cagatctgca ctagcaacca gaactaatat ttcatttaac
541 cccaccaaag ggggaggcga gaggagccag aagcaaactt cagctgtctc agccggatcc
601 gtggttccta catttggagg agccgcgtgc cagaaggcgt aggaccccaa ggggggacaa
661 ggaggactcc cgagtctccc ttcgccgctc tgcgaggccg aagcggtgga ctgagccgct
721 cgggacagcg gcaccggagg aggctcggag aagatgcggg gctcggggcc ccggggtgcg
781 ggacgccggc ggcccccaag cggcggcggc gacaccccca tcaccccagc gtccctggcc
841 ggctgctact ctgcacctcg acgggctccc ctctggacgt gccttctcct gtgcgccgca
901 ctccggaccc tcctggccag ccccagcaat gaagtgaatt tattggattc acgcactgtc
961 atgggggacc tgggatggat tgcttttcca aaaaatgggt gggaagagat tggtgaagtg
1021 gatgaaaatt atgcccctat ccacacatac caagtatgca aagtgatgga acagaatcag
1081 aataactggc ttttgaccag ttggatctcc aatgaaggtg cttccagaat cttcatagaa
1141 ctcaaattta ccctgcggga ctgcaacagc cttcctggag gactggggac ctgtaaggaa
1201 acctttaata tgtattactt tgagtcagat gatcagaatg ggagaaacat caaggaaaac
1261 caatacatca aaattgatac cattgctgcc gatgaaagct ttacagaact tgatcttggt
1321 gaccgtgtta tgaaactgaa tacagaggtc agagatgtag gacctctaag caaaaaggga
1381 ttttatcttg cttttcaaga tgttggtgct tgcattgctc tggtttctgt gcgtgtatac
1441 tataaaaaat gcccttctgt ggtacgacac ttggctgtct tccctgacac catcactgga
1501 gctgattctt cccaattgct cgaagtgtca ggctcctgtg tcaaccattc tgtgaccgat
1561 gaacctccca aaatgcactg cagcgccgaa ggggagtggc tggtgcccat cgggaaatgc
1621 atgtgcaagg caggatatga agagaaaaat ggcacctgtc aagtgtgcag acctgggttc
1681 ttcaaagcct cacctcacat ccagagctgc ggcaaatgtc cacctcacag ttatacccat
1741 gaggaagctt caacctcttg tgtctgtgaa aaggattatt tcaggagaga gtctgatcca
1801 cccacaatgg catgcacaag acccccctct gctcctcgga atgccatctc aaatgttaat
1861 gaaactagtg tctttctgga atggattccg cctgctgaca ctggtggaag gaaagacgtg
1921 tcatattata ttgcatgcaa gaagtgcaac tcccatgcag gtgtgtgtga ggagtgtggc
1981 ggtcatgtca ggtaccttcc ccggcaaagc ggcctgaaaa acacctctgt catgatggtg
2041 gatctactcg ctcacacaaa ctataccttt gagattgagg cagtgaatgg agtgtccgac
2101 ttgagcccag gagcccggca gtatgtgtct gtaaatgtaa ccacaaatca agcagctcca
2161 tctccagtca ccaatgtgaa aaaagggaaa attgcaaaaa acagcatctc tttgtcttgg
2221 caagaaccag atcgtcccaa tggaatcatc ctagagtatg aaatcaagta ttttgaaaag
2281 gaccaagaga ccagctacac gattatcaaa tctaaagaga caactattac tgcagagggc
2341 ttgaaaccag cttcagttta tgtcttccaa attcgagcac gtacagcagc aggctatggt
2401 gtcttcagtc gaagatttga gtttgaaacc accccagtgt cagttgcagc atccagcgat
2461 caaagccaga ttcctgtaat tgctgtgtct gtgacagtgg gagtcatttt gttggcagtg
2521 gttatcggcg tcctcctcag tggaagttgc tgcgaatgtg gctgtgggag ggcttcttcc
2581 ctgtgcgctg ttgcccatcc aagcctaata tggcggtgtg gctacagcaa agcaaaacaa
2641 gatccagaag aggaaaagat gcattttcat aatgggcaca ttaaactgcc aggagtaaga
2701 acttacattg atccacatac ctatgaggat cccaatcaag ctgtccacga atttgctaag
2761 gagatagaag catcatgtat caccattgag agagttattg gagcaggtga atttggtgaa
2821 gtttgtagtg gacgtttgaa actaccagga aaaagagaat tacctgtggc tatcaaaacc
2881 cttaaagtag gctatactga aaagcaacgc agagatttcc taggtgaagc aagtatcatg
2941 ggacagtttg atcatcctaa catcatccat ttagaaggtg tggtgaccaa aagtaaacca
3001 gtgatgatcg tgacagagta tatggagaat ggctctttag atacattttt gaagaaaaac
3061 gatgggcagt tcactgtgat tcagcttgtt ggcatgctga gaggtatctc tgcaggaatg
3121 aagtaccttt ctgacatggg ctatgtgcat agagatcttg ctgccagaaa catcttaatc
3181 aacagtaacc ttgtgtgcaa agtgtctgac tttggacttt cccgggtact ggaagatgat
3241 cccgaggcag cctacaccac aaggggagga aaaattccaa tcagatggac tgccccagaa
3301 gcaatagctt tccgaaagtt tacttctgcc agtgatgtct ggagttatgg aatagtaatg
3361 tgggaagttg tgtcttatgg agagagaccc tactgggaga tgaccaatca agatgtgatt
3421 aaagcggtag aggaaggcta tcgtctgcca agccccatgg attgtcctgc tgctctctat
3481 cagttaatgc tggattgctg gcagaaagag cgaaatagca ggcccaagtt tgatgaaata
3541 gtcaacatgt tggacaagct gatacgtaac ccaagtagtc tgaagacgct ggttaatgca
3601 tcctgcagag tatctaattt attggcagaa catagcccac taggatctgg agcctacaga
3661 tcagtaggtg aatggctaga ggcaatcaag atgggccggt atacagagat tttcatggaa
3721 aatggataca gttcaatgga cgctgtggct caggtgacct tggagtgagt aatttttctg
3781 ataattttta cataattgct ggggcaagaa aaattgttca aaaaccaatc tggatgaggt
3841 aagggaaatc agttaacctt tgcggatgtg tggcagctct caaagaagcc tcatcatctt
3901 tagcctgtat tgttaacaac tgcatggtta atgctacatg tggccagtat ctttgcttct
3961 ttgcttcaaa caaataacat tggcatactt gaataattgg aataacagct ccttggcaaa
4021 atactggtgt tttgtgttgt ggaaaagatg ttttcttgac aagttttttt atactggtat
4081 ctatgttata tgaatgtaaa tacaaaacaa aataaactgt aagcacaatt ggtgtggcta
4141 gtcctacata aggaccaaac atatttgtac attttggctc tctacgatga atatcaaggt
4201 aacagtagct taaacaaagc ttccctggca ggatctcatt taatttctaa atggtgcacc
4261 ttacattctt tcaatctaag gatgtatcag atcccgcctc tgatttgtta tttggtacaa
4321 tctcagtgga accaattgtg cccttttctg tttgcacgtt taagataaaa tttatcaaac
4381 cttattaaat aaaaatcact agagttaaat attaagttct ttaaggttgt aagttgtttg
4441 tattttatta tatactctgt acatgtggtt gttttagcct aattgttatt tgtgaaaatt
4501 aactgtcttt atggtggttc catctagatt acattaacat taatgtttta acctgtgaat
4561 ataatgataa cttacttcaa attacctgcc aattcaaagg ttaaaatatt gtaaggttta
4621 gaaaatggta gaatattctg aagcactaaa ccatagttgt tattttattt gtacacatga
4681 tatgaacatt aagcagttct tgctcaccca tctctattat tctgacattc tttgattcat
4741 tgaattcact gttcctcccc acagaaggta acagggtacc accatttatc accaattaat
4801 gtcacattct cagcattctc ttccttcata cctataacta aaaggacctg aaaccaacca
4861 ctcagcttgc tttctaaatt tactgaatct cattctcacg gtccaccaga tcatatctac
4921 ttgataacac atatgctttg tccattattt ctttggacac tcaaggaacc catttgtgct
4981 atatttaaac tggtatactg aaaaatttac tgataattta aaactatttt tacatgattg
5041 ctatttaatt tttcagtaaa aatggtcatt ttaatttatt aaagtcattt gtcattttat
5101 attaaaatga tattgtaggt atttcttcta cccaatgtca gattacttgt aaatatataa
5161 taaaattatt tgcatt
//