LOCUS AB209259 3214 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for semaphorin 3F variant protein.
ACCESSION AB209259
VERSION AB209259.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3214)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..3214
/clone="fk00237"
/db_xref="H-InvDB:HIT000329194"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003001097"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1..2253
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="semaphorin 3F variant"
/protein_id="BAD92496.1"
/translation="ERANEPRRSGEPRAQRRTWDHLPATPRVRLSFKELKATGTAHFF
NFLLNTTDYRILLKDEDHDRMYVGSKDYVLSLDLHDINREPLIIHWAASPQRIEECVL
SGKDVNGECGNFVRLIQPWNRTHLYVCGTGAYNPMCTYVNRGRRAQDYIFYLEPERLE
SGKGKCPYDPKLDTASALINEELYAGVYIDFMGTDAAIFRTLGKQTAMRTDQYNSRWL
NDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQSPAVYARIGRICLNDDGGHCCLV
NKWSTFLKARLVCSVPGEDGIETHFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGS
AVCVYSMADIRMVFNGPFAHKEGPNYQWMPFSGKMPYPRPGTCPGGTFTPSMKSTKDY
PDEVINFMRSHPLMYQAVYPLQRRPLVVRTGAPYRLTTIAVDQVDAADGRYEVLFLGT
DRGTVQKVIVLPKDDQEMEELMLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHL
SLHRCQAYGAACADCCLARDPYCAWDGQACSRYTASSKRRSRRQDVRHGNPIRQCRGF
NSNANKNAVESVQYGVAGSAAFLECQPRSPQATVKWLFQRDPGDRRREIRAEDRFLRT
EQGLLLRALQLSDRGLYSCTATENNFKHVVTRVQLHVLGRDAVHAALFPPLSMSAPPP
PGAGPPTPPYQELAQLLAQPEVGLIHQYCQGYWRHVPPSPREAPGAPRSPEPQDQKKP
RNRRHHPPDT"
BASE COUNT 658 a 1011 c 922 g 623 t
ORIGIN
1 gagcgagcga acgaaccgcg gcggtccgga gagccccgag cgcagcgcag gacctgggac
61 cacctcccgg ccacgccccg ggtccggctc tcattcaaag agctgaaggc cacaggcacc
121 gcccacttct tcaacttcct gctcaacaca accgactacc gaatcttgct caaggacgag
181 gaccacgacc gcatgtacgt gggcagcaag gactacgtgc tgtccctgga cctgcacgac
241 atcaaccgcg agcccctcat tatacactgg gcagcctccc cacagcgcat cgaggaatgc
301 gtgctctcag gcaaggatgt caacggcgag tgtgggaact tcgtcaggct catccagccc
361 tggaaccgaa cacacctgta tgtgtgcggg acaggtgcct acaaccccat gtgcacctat
421 gtgaaccgcg gacgccgcgc ccaggattac atcttctacc tggagcctga gcgactcgag
481 tcagggaagg gcaagtgtcc gtacgatccc aagctggaca cagcatcggc cctcatcaat
541 gaggagctct atgctggtgt gtacatcgat tttatgggca ctgatgcagc catcttccgc
601 acacttggaa agcagacagc catgcgcacg gatcagtaca actcccggtg gctgaacgac
661 ccgtcgttca tccatgctga gctcattcct gacagtgcgg agcgcaatga tgataagctt
721 tacttcttct tccgtgagcg gtcggcagag gcgccgcaga gccccgcggt gtacgcccgc
781 atcgggcgca tttgcctgaa cgatgacggt ggtcactgtt gcctggtcaa caagtggagc
841 acattcctga aggcgcggct cgtctgctct gtcccgggcg aggatggcat tgagactcac
901 tttgatgagc tccaggacgt gtttgtccag cagacccagg acgtgaggaa ccctgtcatt
961 tacgctgtct ttacctcctc tggctccgtg ttccgaggct ctgccgtgtg tgtctactcc
1021 atggctgata ttcgcatggt cttcaacggg ccctttgccc acaaagaggg gcccaactac
1081 cagtggatgc ccttctcagg gaagatgccc tacccacggc cgggcacgtg ccctggtgga
1141 accttcacgc catctatgaa gtccaccaag gattatcctg atgaggtgat caacttcatg
1201 cgcagccacc cactcatgta ccaggccgtg taccctctgc agcggcggcc cctggtagtc
1261 cgcacaggtg ctccctaccg ccttaccact attgccgtgg accaggtgga tgcagccgac
1321 gggcgctatg aggtgctttt cctgggcaca gaccgcggga cagtgcagaa ggtcattgtg
1381 ctgcccaagg atgaccagga gatggaggag ctcatgctgg aggaggtgga ggtcttcaag
1441 gatccagcac ccgtcaagac catgaccatc tcttctaaga ggcaacaact ctacgtggcg
1501 tcagccgtgg gtgtcacaca cctgagcctg caccgctgcc aggcgtatgg ggctgcctgt
1561 gctgactgct gccttgcccg ggacccttac tgtgcctggg atggccaggc ctgctcccgc
1621 tatacagcat cctccaagag gcggagccgc cggcaggacg tccggcacgg aaaccccatc
1681 aggcagtgcc gtgggttcaa ctccaatgcc aacaagaatg ccgtggagtc tgtgcagtat
1741 ggcgtggccg gcagcgcagc cttccttgag tgccagcccc gctcgcccca agccactgtt
1801 aagtggctgt tccagcgaga tcctggtgac cggcgccgag agattcgtgc agaggaccgc
1861 ttcctgcgca cagagcaggg cttgttgctc cgtgcactgc agctcagcga tcgtggcctc
1921 tactcctgca cagccactga gaacaacttt aagcacgtcg tcacacgagt gcagctgcat
1981 gtactgggcc gggacgccgt ccatgctgcc ctcttcccac cactgtccat gagcgccccg
2041 ccacccccag gcgcaggccc cccaacgcct ccttaccagg agttagccca gctgctggcc
2101 cagccagaag tgggcctcat ccaccagtac tgccagggtt actggcgcca tgtgcccccc
2161 agccccaggg aggctccagg ggcaccccgg tctcctgagc cccaggacca gaaaaagccc
2221 cggaaccgcc ggcaccaccc tccggacaca tgaggccagc tgcctgtgcc tgccatgggc
2281 cagcctagcc cttgtccctt ttaatataaa agatatatat atatatatat atatatataa
2341 aatatctata ttctatacac accctgcccc tgcaaagaca gtatttattg gtgggttgaa
2401 tatagcctgc ctcagtggca gcatcctcca aaacttagac ccatgctggt cagagacggc
2461 agaaaacaga gcctgcctaa ccaggcccag ccagttggtg gggccaggcc aggaccacac
2521 agtccccaga ctcagctgga agtctacctg ctggacagcc tccgccaaga tctacaggac
2581 aaagggaggg agcaagccct actcggatgg ggcacggact gtccaccttt tctgatgtgt
2641 gttgtcagcc tgtgctgtgg catagacatg gatgcgagga ccactttgga gactggggtg
2701 gcctcaagag cacacagaga agggaagaag gggccatcac aggatgccag cccctgcctg
2761 ggttgggggc actcagccac gaccagcccc ttcctgggta tttattctct atttattggg
2821 gataggagaa gaggcatcct gcctgggtgg gacagcccct tcagcccctt ctcccctccc
2881 cgcctggcca gggcagggcc accccactct acctccttag ctttccctgt gccactttga
2941 ctcagaggct gggagcatag cagaggggcc aggcccaggc agagctgacg ggaggcccca
3001 gctctgaggg gagggggtcc gtggtagagg cctggggccg gtagaggctc cccagggctc
3061 ccttatgtcc accacttcag gggatgggtg tggatgtaat tagctctggg gggcagttgg
3121 gtagatgggt gggggctcct ggtggccttc tgctgcccag gccacagccg cctttgggtt
3181 ccatcttgct aataaacact ggctctggga ctag
//