LOCUS AB209252 3926 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for chapsyn-110 variant protein.
ACCESSION AB209252
VERSION AB209252.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3926)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..3926
/clone="fj20077"
/db_xref="H-InvDB:HIT000329187"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003001081"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <240..1907
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="chapsyn-110 variant"
/protein_id="BAD92489.1"
/translation="EAEYRSICSLFTAMFFACYCALRTNVKKYRYQDEDAPHDHSLPR
LTHEVRGPELVHVSEKNLSQIENVHGYVLQSHISPLKASPAPIIVNTDTLDTIPYVNG
TEIEYEFEEITLERGNSGLGFSIAGGTDNPHIGDDPGIFITKIIPGGAAAEDGRLRVN
DCILRVNEVDVSEVSHSKAVEALKEAGSIVRLYVRRRRPILETVVEIKLFKGPKGLGF
SIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVA
ILKNTSEVVYLKVGKPTTIYMTDPYGPPDITHSYSPPMENHLLSGNNGTLEYKTSLPP
ISPGRYSPIPKHMLVDDDYTRPPEPVYSTVNKLCDKPASPRHYSPVECDKSFLLSAPY
SHYHLGLLPDSEMTSHSQHSTATRQPSMTLQRAVSLEGEPRKVVLHKGSTGLGFNIVG
GEDGEGIFVSFILAGGPADLSGELQRGDQILSVNGIDLRGASHEQAAAALKGAGQTVT
IIAQYQPEDYARFEAKIHDLREQMMNHSMSSGSGSLRTNQKRSLYVR"
BASE COUNT 1229 a 792 c 793 g 1112 t
ORIGIN
1 ggaaaagcaa ctgaggtctt aactttcaga cgctgaattc tcatctaatt gaaattactg
61 ggcataatgc tatatatagc caatgaagag attttgagct ctcactcagt gccttcaaga
121 catgtcgttt tgtagtcaga gaaaacagag atcaatgcat tttcaaactg acagagggaa
181 cggatgctct ttagtagcac atgcccagga tcgtgtgtgt ggggcttgcg ctgtgctgag
241 aagctgaata ccggtccata tgctccttat ttactgcaat gttctttgca tgttactgtg
301 cactccggac taacgtgaag aagtatcgat atcaagatga ggacgctcca catgatcatt
361 ccttacctcg actaacccac gaagtaagag gcccagaact cgtgcatgta tcagaaaaga
421 acctctctca aatagaaaat gtccatggat atgtcttgca gtctcatatt tctcctctga
481 aggccagtcc tgctcctata attgtcaaca cagatacttt ggacacaatt ccttatgtca
541 atgggacaga aattgaatat gaatttgaag aaattacact ggagaggggg aattctggcc
601 tgggattcag tattgctggg gggacagata atccccacat tggagatgac cctggcatat
661 ttattacgaa gattatacca ggaggtgctg cagcagagga tggcagactc agggtcaatg
721 attgtatctt gcgggtgaat gaggttgatg tgtcagaggt ttcccacagt aaagcggtgg
781 aagccctgaa ggaagcaggg tctatcgttc ggctgtatgt gcgtagaaga cgacctattt
841 tggagaccgt tgtggaaatc aaactgttca aaggccctaa aggtttaggc ttcagtattg
901 caggaggtgt ggggaaccaa cacattcctg gagacaacag catttatgta actaaaatta
961 tagatggagg agctgcacaa aaagatggaa ggttgcaagt aggagataga ctactaatgg
1021 taaacaacta cagtttagaa gaagtaacac acgaagaggc agtagcaata ttaaagaaca
1081 catcagaggt agtttattta aaagttggca aacccactac catttatatg actgatcctt
1141 atggtccacc tgatattact cactcttatt ctccaccaat ggaaaaccat ctactctctg
1201 gcaacaatgg cactttagaa tataaaacct ccctgccacc catctctcca ggaaggtact
1261 caccaattcc aaagcacatg cttgttgacg acgactacac caggcctccg gaacctgttt
1321 acagcactgt gaacaaacta tgtgataagc ctgcttctcc caggcactat tcccctgttg
1381 agtgtgacaa aagcttcctc ctctcagctc cctattccca ctaccaccta ggcctgctac
1441 ctgactctga gatgaccagt cattcccaac atagcaccgc aactcgtcag ccttcaatga
1501 ctctccaacg ggccgtctcc ctggaaggag agcctcgcaa ggtagtcctg cacaaaggct
1561 ccactggcct gggcttcaac attgtcggtg gggaagatgg agaaggtatt tttgtgtcct
1621 tcattctggc tggtggacca gcagacctaa gtggggagct ccagagagga gaccagatcc
1681 tatcggtgaa tggcattgac ctccgtggtg catcccacga gcaggcagct gctgcactaa
1741 agggggctgg acagacagtg acgattatag cacaatatca acctgaagat tacgctcgat
1801 ttgaggccaa aatccatgac ctacgagagc agatgatgaa ccacagcatg agctccgggt
1861 ccggatccct gcgaaccaat cagaaacgct ccctctacgt caggtaggca aaggagtatt
1921 tctctatctg cactttgtga gcaattcaac ttgagaaaac aaaggcaaca ccatgtagca
1981 acagaacatg tgtcccactt aacccacttt catcagtaca ctactgaaag accttgtgtt
2041 taagcatttg gaataaatgt ttgaaatgtt attagattaa attagttaaa ggtgcctgct
2101 tttatcaagt tattctttgg caaagttatg attcaggata aaatgctcag cataggttgc
2161 aataaaaata atgagaagaa acattttcat ttctaataaa tcttaaatgg catatgtgga
2221 ccaaaccctt ggacatttgc ttaccatcag tgtgaaaaga aaatattcct gtattatctc
2281 ctaacctgcc tgatactgat tgcattaact ttagtgcatc agtttaaaat ccacggcatt
2341 cttctaaaga gttatgtgct tttctctaac aagttttggc agaaagactt ccttctgtgt
2401 catctcgcta ccagtttttt tctcagacca tagaagttac ttgttccttg tctgacaaaa
2461 ctcatcaatt taccagaaaa agataaatga ttgattgaat gtgaaatgcc ttccagtctt
2521 tcatcctagt agctacctct tgagtaagat ccatcaacac tcgactataa catgctcctc
2581 ttccaagaca agcttcctgt attacttcca aacttcatca gtgctgactg tacttttaaa
2641 aatatataag tactaacagg caaaaggaag aaagtgatgc ctaattaacg ggcaacatga
2701 atctatgtac catatggaag aaccatgccc attcttattg tattctccac tccccactct
2761 ggcctgaatt caatctgact ccagcctgag gtcatatcct tcttacctga aattttaggc
2821 atgacgtata tgttatagat actaatttac atgcttgagt tgaacttttg ctgttggttc
2881 cactttggct ctaaagttaa gttttgtatg tatttggtat tcacagcagg gctaagaagg
2941 gagtgggatt ctggaaggca caggttctca tagggcttaa tttcccgact gaactgataa
3001 gcctagagtc ccttcttatt ccagggaagc cctgagatta agaaaaacaa gttattaacc
3061 ctatgaattt ggccaactcc atttcaaaag attattttga tacccttaat tgtaatctgt
3121 gactgttcag aaccacccta aaacatgtct tgtagtgaca ttacaaatat gatggaaagt
3181 taacaagctc catttgtggt tcttcttctc tcttgtgttg tattgctggt ctacatgcta
3241 caaagtattt ttaaattttg aaatgtttta gtccctggta gcaaattgga aaaagtcagc
3301 tgggttaata ggatagaact aaatcagtta gtgtaactga aatggttata tatataataa
3361 agctcggagg gaaaattacc aagtgtctta ttaagagata gaatgcataa attgttcaga
3421 tactagaaga aatttgctga aatatattgc taatagctat taagttttgg aagattaaga
3481 aaattaaatg aagtgatatg atattatata aaactaatac acttatttga aagagtagta
3541 attagattca gatctttatt ctctaaaatc ataaataaaa gtataacgta cagaagagac
3601 aaagacttag agtaacaaag taatggttgg agattgtatt gaaaggagga acctcttttt
3661 aatgagactc aaaaatactt gacatttcat aagaaagtcc ccaaatgaaa tctctgtaat
3721 atacaaatat ggtatttagt ttccaaatgt tcaattatta ctacttattt tgtacctaga
3781 gggctgactt tagcatctaa atgactctaa gagacatgaa attaaaagaa atatgggcca
3841 tgcgtatagt catatcagca aatcagaaag aaagaactta caagagcccc ctggccttat
3901 tctcatgaaa agtgataaaa cagacc
//