LOCUS AB209147 6173 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for caspase 9 isoform alpha preproprotein
variant protein.
ACCESSION AB209147
VERSION AB209147.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6173)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..6173
/clone="fg06951"
/db_xref="H-InvDB:HIT000329082"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003000834"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <141..1511
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="caspase 9 isoform alpha preproprotein variant"
/protein_id="BAD92384.1"
/translation="RGGRPWGGGGSWGLGRAAEARKRTEAAWSLSWLLAMDEADRRLL
RRCRLRLVEELQVDQLWDALLSRELFRPHMIEDIQRAGSGSRRDQARQLIIDLETRGS
QALPLFISCLEDTGQDMLASFLRTNRQAAKLSKPTLENLTPVVLRPEIRKPEVLRPET
PRPVDIGSGGFGDVGALESLRGNADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGS
NIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAQQDHGALDCCVVVILSHGCQA
SHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVA
STSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDP
KSGSWYVETLDDIFEQWAHSEDLQSLLLRVSAAFLCKGEGRLLRGSVSSWGWGFGVSR
AGPNQG"
BASE COUNT 1294 a 1603 c 1608 g 1668 t
ORIGIN
1 ttggccctgg gggcggggcg aggcgcagag gtgcgtcctg agggcggggc ggtgacgcaa
61 gagcgactcc tgggggcggg gcgaggcctt ggagatgcgt ccggaggcgg tggggagcga
121 agactgaccc ggggccgtga cgcgggggca ggccctgggg cgggggcggg tcctggggac
181 tggggcgggc ggccgaggcc cggaagcgga ctgaggcggc ctggagtctt agttggctac
241 tcgccatgga cgaagcggat cggcggctcc tgcggcggtg ccggctgcgg ctggtggaag
301 agctgcaggt ggaccagctc tgggacgccc tgctgagccg cgagctgttc aggccccata
361 tgatcgagga catccagcgg gcaggctctg gatctcggcg ggatcaggcc aggcagctga
421 tcatagatct ggagactcga gggagtcagg ctcttccttt gttcatctcc tgcttagagg
481 acacaggcca ggacatgctg gcttcgtttc tgcgaactaa caggcaagca gcaaagttgt
541 cgaagccaac cctagaaaac cttaccccag tggtgctcag accagagatt cgcaaaccag
601 aggttctcag accggaaaca cccagaccag tggacattgg ttctggagga tttggtgatg
661 tcggtgctct tgagagtttg aggggaaatg cagatttggc ttacatcctg agcatggagc
721 cctgtggcca ctgcctcatt atcaacaatg tgaacttctg ccgtgagtcc gggctccgca
781 cccgcactgg ctccaacatc gactgtgaga agttgcggcg tcgcttctcc tcgctgcatt
841 tcatggtgga ggtgaagggc gacctgactg ccaagaaaat ggtgctggct ttgctggagc
901 tggcgcagca ggaccacggt gctctggact gctgcgtggt ggtcattctc tctcacggct
961 gtcaggccag ccacctgcag ttcccagggg ctgtctacgg cacagatgga tgccctgtgt
1021 cggtcgagaa gattgtgaac atcttcaatg ggaccagctg ccccagcctg ggagggaagc
1081 ccaagctctt tttcatccag gcctgtggtg gggagcagaa agaccatggg tttgaggtgg
1141 cctccacttc ccctgaagac gagtcccctg gcagtaaccc cgagccagat gccaccccgt
1201 tccaggaagg tttgaggacc ttcgaccagc tggacgccat atctagtttg cccacaccca
1261 gtgacatctt tgtgtcctac tctactttcc caggttttgt ttcctggagg gaccccaaga
1321 gtggctcctg gtacgttgag accctggacg acatctttga gcagtgggct cactctgaag
1381 acctgcagtc cctcctgctt agggtgagtg ctgccttcct ctgcaaagga gaggggaggc
1441 tgctgagggg cagcgtgtcc tcctggggct ggggatttgg ggtgagcagg gcaggcccaa
1501 accaagggta aaaggtagta gactcctgcc tctgagcctt ggagtcggca cttttgtgtc
1561 tctttatgag aggcatcctg cctgtggtga cgtttgccct ttattcaaag agttgccttc
1621 cctgtctcct ccaaggtccc caggttgaca cctcccgctc ctccactgat ggagctggtc
1681 ctcagtgcca gcgcaggatg gctctgtcca gaccctgaag gcgggtcatg ggcccctccc
1741 tatatcctgt gggcatcatg tagtcttcta ctcttgaccc tcaagaattg tgaacccctc
1801 cttgtacatc gccttctcag gaggccccag tgaggaaaca gatagggaag ggtggcctga
1861 taggcccagt cctactccat agaaacccga ctcagagcag ttgcttcctc tgagggtcct
1921 gtggccttgt ggctgccttg ggaggcagca tgtatgggcc ccagctgctc tgctcaggta
1981 ttcatgccac gagaaggggc tgcgaggctg gggccactcc tggctccttg caaatatttc
2041 agtctgattt gaactttatg aatttggaaa ttttgaattt tgagtttttt aaaggtaaag
2101 ttgaggtgcg tattctttaa gccctcctgc tcaaagaggc tgcagtttga gctgttttta
2161 aggtgcgggt tgagtggaca ttccccccag cccctcttga attcttcctt cagtccagag
2221 aactgaactc acagagctct ccatggtcat gtcttacagg tcgctaatgc tgtttcggtg
2281 aaagggattt ataaacagat gcctggttgc tttaatttcc tccggaaaaa acttttcttt
2341 aaaacatcat aaggccaggg cccctcaccc tgccttatct tgcaccccaa agctttcctg
2401 ccccaggcct gaaagaggct gaggcctgga ctttcctgca actcaaggac tttgcagccg
2461 gcacagggtc tgctctttct ctgccagtga cagacaggct cttagcagct tccagattga
2521 cgacaagtgc tgaacagtgg aggaagaggg acagatgaat gccgtggatt gcacgtggcc
2581 tcttgagcag tggctggtcc agggctagtg acttgtgtcc catgatccct gtgttgtctc
2641 tagagcaggg attaacctct gcactactga catgtggggc caggtcaccc tttgctgtga
2701 ggctgtcctg tacattgtgg gatgttcagc actgtccctt gcctcaatgc cagtaacgcg
2761 tcttcctgag tggtgccaaa caaaaaggtt ctcaggtgtt gccaaatatg tcctggggta
2821 taaaactttc ctcgcctgac aaccactggt ctgtagggat ttttggctac acacaaacca
2881 gtatcgctca tagatcagca aaccggggcc tactagagtc tgaacagctg taatctatga
2941 attctaagtg aaattttaaa aattgttaat ttttcctata ttgcattaat tttaaaaaat
3001 aaatctgagg caaatatgga ctctcttttg cctatttctt ccctcatttt gctccaactc
3061 tttcttcttc cttacaaaag agacttttgc ttttttcgaa acatttcccc atgtttttct
3121 ggggtctcgc tatgttgccc aggctggtct caaactcctg ggctcaagtg accctcccaa
3181 gtagctctta ctacaggcgt gcaccattgc acccagcccc atttattcat gtcttatttc
3241 acttgatcct tatcccatcc caggaaggca acaagggtga gaaccctgtg ctcagggagg
3301 ttaggtctct tgtccaaggg aaaacgatta tccagagaag agacctggcc agaacctggg
3361 tcccctgagt cctagccatg cttcccatgt gccttacttg ctgaagcacc cccggactgc
3421 agtgtgaacg tgctgtgcaa tagtgacacg ctgggcttcc ccacaaggct ccaccctgag
3481 gtcttttaag ctgtccttat gccagcctat ttcttgtttt ttgggccttt ttttttggag
3541 atggggtctc gctctgtcgc ccaggctgga gtgcaatgac gcaatcttgg cttattgcag
3601 tctcgacctc ctgggctcaa gagatccttc cacctcagcc acctgagtag cttggactgc
3661 aggtgtgcac cacctctccc agttaatttt tgtattttta gtagagacgg agttatgcca
3721 tgttactcag gctggtcttg aactcctgga ctcaagcgat cagcctgcct tagcctccca
3781 aagtgcaggg gttacaggct tgagccattg cgcctgacct atttctggtt cttagggccc
3841 tggatgttag gatggatttc tgaattaata ataataataa aaccctcatc aagatgtgat
3901 ttgcatagtt gtcactttat ataatattat tttccttctg tgacctttcc aagtctgaaa
3961 cagtcccagg gacttctttt ggttagttat ttgcaatcac ctgcaggaca cacacacaag
4021 aaaattgtca ggttcacgta accacagagc tgtgcgtggc agtttcctgt ctctgtcctc
4081 ctgggctaag ctactcaagt gagtcacagg cagcccacac tacagtagct cctgcctgag
4141 gagttcagat gatgtttcgg agaaaaagat gcaatcacag cttttcattg acctgttagg
4201 gtcttcctgt aaagggggtc ttagccagga gtcctgtgtg ggcttcaggt cagggggcct
4261 tcgaaccccc taaaaattat atgccaaatg tgcggatggc atatttttag atttcatttg
4321 tttctcatca aaactgctgt ttgcaaggca gttatgcact gtggttgggg ctataactgt
4381 ttccagaggc tgttgatcag tatctgttaa actttttttt tttttttttg agacagtctt
4441 gctctgttgc ccagacgagt acagtgagct gagatcaagc cactgtactc cagcctgtgc
4501 aacagagcga gactccattt gaaaaaaaac aaaacaaaaa caatgattac ctctggagag
4561 tggaattgga gatgtaaaat gaggggggac ttctactttt ttacttgata ctctcctgta
4621 ttcttttaat atttttacaa agagtatgta ttaccttctg gaaaaagaat aaaaactaag
4681 gattgctgga gttcatgtgt gactgtcatt caactgacat ttgttgaaag gatgaatgcc
4741 gcaggccact tgtctcctct gcttctctgc tcttatcttt tgcttgtact tcctgacctt
4801 ggcttgtcac ctgtctgggt ttatccaggc aggtgctctc agtcaccccc agggctctag
4861 tggtacgtga ctccaggctg cacacactgt gtccctgggt tggggccact tcaaggtttc
4921 actagcccct ctgccgctgc caggggcagc ccccacccaa ggacagctgg ttgcttggct
4981 ctcccccttc tgaaacccgt taccgggcat ctgtgcctgt cccgactgct ctcccatgaa
5041 cacagggcct ctgcccagct gcctcgggag gcgtgctgcc ccgtggatcc ctgctgccat
5101 ctggccatgc tttgggatct ggcctgttct gttgtgcttg tgtctgtggc tgggaacagc
5161 tgatgctggg aacagctgat gctgggacaa cagatcggga caattgcccc tgcccctgct
5221 tcaggtcccc aggatgctgc caggaccagc tgcacggtga ctcccacagc agctggggct
5281 ggaaaacggt cttaggattt ggctgggaaa ggcccctaag cagcctttcg tccagtcagt
5341 ctcaggccag gctcctttaa cgtgcgtggt gcctccaaag gtggactcag atgggttttt
5401 cccaatttag atataaaaag ccccaattaa tgattaatgg ctactgtctt tttgattttc
5461 catttttttc caacaaactt ttttggaatt tctgcctatg accacttgtt ggcaaaagga
5521 tgccagcaga cagacaaatg aacaaggagc tggcaagaat caatgggaac acttggaagc
5581 agccacctgc ttattttgac agtttagttt tctcccctga ccacgtgctt atggctgcag
5641 tttcatattt ggttttataa gtgtcagttt aattcaattt aacacttctc tgcaaattaa
5701 acttagtgaa gtcagatgtc agctttcccc ttctttgggg gctctgccac gaataccata
5761 actccctctt gctctagtgc ctaaaaatgt ggaggtctag ttcaagtccc actttacaga
5821 agagcaaaca ggtggtccct aattggcaca aagtatccgc ctcttctccc ccagcttcta
5881 ttaccaggca tggtgtctcc tctgccctct cctgggctcc cctttcttgt gacggggttt
5941 cctcttctgg ctgctttcat ctacttctgt gtgtatccat ggctgctcct taatatttat
6001 gccaactatt attatcatta ttttcagaga cggggtcttg ctatgtcgct caggctgcag
6061 tgcagtggtg cgaccttggc ttactgtagg ctccacctct tgggccaaag cgatccttcc
6121 acctcagcct cccaggcagc tgggactgca ggcatgcacc accatggcta att
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