LOCUS AB209088 3835 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for synapsin II isoform IIb variant protein.
ACCESSION AB209088
VERSION AB209088.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3835)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..3835
/clone="hk09858"
/db_xref="H-InvDB:HIT000329023"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003000703"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1..1547
/codon_start=3
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="synapsin II isoform IIb variant"
/protein_id="BAD92325.1"
/translation="GVWRRGLSLCWLSRRLSRLSRLNLAFRPRSPSAPPDPVAPRAPS
PLSQMMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPTASPGPERRPPPAS
APAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHA
DWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRPDF
VLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLG
GEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALT
QTYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLW
VDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKM
NQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQGCLQYILDCNGIAVGP
KQVQAS"
BASE COUNT 899 a 983 c 941 g 1012 t
ORIGIN
1 gcggggtctg gcgccggggt ctgagtctct gctggctaag ccgccgcctc agccgcctca
61 gtcgcctcaa tctcgccttc cgccctcgct ctccctccgc gccaccagac cccgtagccc
121 cgcgcgcccc cagcccttta agccagatga tgaacttcct gcggcgccgg ctgtcggaca
181 gcagcttcat cgccaacctg cccaacggct acatgaccga cctgcagcgg cccgagcccc
241 agcagccgcc gccgccgccg cccccgaccg cctcgccggg cccggagcgg aggccgccgc
301 ccgcctcggc gcccgcgccg cagcccgcgc cgacgccgtc ggtgggcagc agcttcttca
361 gctcgctgtc ccaagccgtg aagcagacgg ccgcctcggc tggcctggtg gacgcgcccg
421 ctcccgcgcc cgcagccgcc aggaaggcca aggtgctgct ggtggtcgac gagccgcacg
481 ccgactgggc caagtgcttt cggggcaaaa aagtccttgg agattatgat atcaaggtgg
541 aacaggcaga attttcagag ctcaacctgg tggcccatgc agatggcacc tatgctgtgg
601 atatgcaggt tctccggaat ggcacaaagg ttgtccggtc cttccggcca gacttcgtgc
661 tcatccggca gcatgcattt ggcatggcgg agaatgagga cttccgccac ctgatcattg
721 gtatgcagta tgcaggcctc cccagcatca actcactgga atccatatac aacttctgtg
781 acaagccatg ggtgtttgcc cagctggtcg ctatctataa gacactggga ggagaaaagt
841 tccctctcat tgaacagaca tactacccca accacaaaga gatgctgaca ctgcccacgt
901 tccctgtggt ggtgaagatt ggccacgctc actcaggcat gggcaaggtc aaagtggaaa
961 accactacga cttccaggac attgccagcg tggtggctct cacccagacc tatgccactg
1021 cagagccttt cattgactcc aagtatgaca tccgggtcca gaagattggc aacaactaca
1081 aggcttacat gaggacatcg atctcaggga actggaagac gaacactggc tctgcgatgc
1141 tggagcagat tgccatgtca gacaggtaca aactgtgggt ggacacctgc tctgagatgt
1201 ttggcggcct ggacatctgt gctgtcaaag ctgtacatgg caaagatggg aaagactaca
1261 tttttgaggt catggactgt agcatgccac tgattgggga acatcaggtg gaggacaggc
1321 aactcatcac cgaactagtc atcagcaaga tgaaccagct gctgtccagg actcctgccc
1381 tgtctcctca gagaccccta acaacccagc agccacagag cggaacactt aaggatccgg
1441 actcaagcaa gaccccacct cagcggccac cccctcaagg ttgtttacag tatattctcg
1501 actgtaatgg cattgcagta gggccaaaac aagtccaagc ttcttaaaat gattggtggt
1561 taatttttca aagcagaaat tttaagccaa aaacaaacga aaggaaagcg gggaggggaa
1621 aacagaccct cccactggtg ccgttgctgc gttctttcaa tgctgactgg actgtgtttt
1681 tcctatgcag tgtcagctcc tctgtctggt tgtttacctg ttcctgttcg tgcttgtaat
1741 gctcacttat gttttctctg tataacttgt gattccaggg ctgtttgtca acagtataca
1801 aaagaattgt gcctctccca agtccagtgt gactttatct tctgggtggt ttgatagtgt
1861 ttttaaaagt aatatataat gtggggtgaa atgggagtag gggggtggac aggggagaaa
1921 cgaaaaccac aaaaagaaaa cccaactcct ctcctccccc caagctcagt taaatccccc
1981 acctccaact ttccctccac cagtgtgctt gggatcttca atgaactgtg cttttcgctt
2041 tctttctgca tgactattgt aactagatag aacattaaga gattttcaag atcaaacttc
2101 catagcttca tccactgaat ttgaaggcat ccaccttttt ctccatttgc taaaatttgg
2161 tgcagtttga gtttatgtga ataggctggc tgtgcctgta gagctcttgt gtttttagtg
2221 atgacatgaa atacaaagaa caagctattt ccaggaatgt gttctgtatt ttacatccca
2281 gtgtaccctt tattttatta ttaactaatt aactatgaga tttttaaaaa atggggccgc
2341 tgatgtgcaa tatcaaagtg aacttgtgag tattttgtgt gtgttgatct cagttgtttc
2401 ttcattgttg ctgtttctgg atccagccat gtgtgcgctt gtgtggacct gaggctgctt
2461 tctgttccca aagcttgacc tgtgtacaga gataattcct tggcaatgtt ggacatagaa
2521 tgcagggagc tactgaaggt ctgtcaggga tttgtccatt ctgctcttgg cctctcctga
2581 ggcctcataa tgggagacca aatcaaaaat gtcccatgtc acttgagtgg gtacactgcc
2641 tacagaacct tgaggttgac tcctgcttca gttctcagct gtttaccaca gccctccagg
2701 gtccaaagat tgaggagctt tctctttcct gggaggaact gtctcagatt tagcttgtgt
2761 gtgttttgga cagaggctcc acagcggtgg ctcttgagga atcctcacca gtttgttctc
2821 ttccctctga caagcagcac ctgagcagat gctgaggcag ttcattaaac caggcctcag
2881 cttcagtgcc tcatcttgcc atctcccggc caggctggga acgggcacca agcagccgcc
2941 tctaacaaac accatggtcc gtggaagttc atgccagcag cttgcctttg agaagaaatg
3001 ctgctggctc tatttttaca ttcccttcca cctctatact gtcatgtcac cgttctgaac
3061 tcccagatct gagaaggaac tagtgttggt ggtatgtaac aagagttacg tatccagggg
3121 cttgtgcctt ggtttctcct ttgattgctg gtaaattctg aggccacaga gaaatgcatt
3181 gagtgtgaat gttgtcatct gtaatccctc cctcagctga taatggtagt tgatctgttg
3241 taaatatata catatatgca tatttgcact tccagatggg ttgcataaga atcaggtcct
3301 taaatacctc ccaatctgat gaaacgatag aataaagtaa catttcccag aatggaggaa
3361 tacattattt tatcgtatat ttttgtccaa gcgatgagct gacggtggta ttgcttctct
3421 gcatgttatc agtgtgtaca tctggtgctt ttcatgtgtc atttgtgagc cacaaatgca
3481 aagttgccat ttgaattcag tcaggctaca gggtggtgtc agtcaaggtc tttcaggtgg
3541 gggagaaatt ggttagggct cccactgcca aatgcaagca gatagcataa cctgactgtt
3601 atgtgccctc aggcagcatg cttagggaca actctgtggc ctgggggaca tctgtgtcac
3661 agtataggat tgccattcag gtgttttgta cctatttctt tcctgacgtt gtcccctttt
3721 tttgtactga tccaactggg agaacctcag ccaatgctgg aagtatgatt gaagtacctc
3781 tcttttgtga ctcttgtaca gcttaatgtg caataaagga aaagttatat ctgtc
//