LOCUS AB208938 3550 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for ATP-dependent RNA helicase ROK1 isoform a
variant protein.
ACCESSION AB208938
VERSION AB208938.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3550)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..3550
/clone="ff01016a"
/db_xref="H-InvDB:HIT000328873"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003000325"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1..1540
/codon_start=2
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="ATP-dependent RNA helicase ROK1 isoform a
variant"
/protein_id="BAD92175.1"
/translation="DVHDLFRRLGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQG
LDFFGNKKSVPGVCGASQTHQKPQNGEKKEESLTERKREQSKKKRKTMTSEIASQEEG
ATIQWMSSVEAKIEDKKVQRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIA
TFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAF
SIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKK
FGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQL
ASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFV
GSETGKLLAMRELVKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQR
DNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGELSFFSFP
SVTH"
BASE COUNT 1131 a 664 c 729 g 1026 t
ORIGIN
1 ggacgtccac gatctctttc gccggctcgg cgcgggggcc aaattcgaca cgagacgctt
61 ctcggcagac gcagctcgat tccagatagg aaaaaggaaa tatgactttg attcttcgga
121 ggtgcttcag ggactggact tttttggaaa caagaagtct gtcccaggtg tgtgtggagc
181 atcacaaaca catcagaagc cccaaaatgg agagaaaaaa gaagagagcc taactgaaag
241 gaagagggag cagagcaaga aaaaaaggaa gacgatgact tcagaaattg cttcccaaga
301 agaaggtgct actatacagt ggatgtcatc tgtagaagca aagattgaag acaaaaaagt
361 tcagagagaa agtaaactaa cttccggaaa gttggagaat ctcagaaaag aaaagataaa
421 cttcttgcgg aataaacaca aaattcacgt ccaaggaacc gatcttcctg acccaattgc
481 tacatttcag caacttgacc aggaatataa aatcaattct cgactacttc agaacattct
541 agatgcaggt ttccaaatgc ctacgccaat ccaaatgcaa gccatcccag ttatgctgca
601 tggtcgggaa cttctggctt ctgctccaac tggatctgga aaaacattag cttttagcat
661 tcctatttta atgcagctga aacaacccgc aaataaaggc ttcagagccc tgattatatc
721 accaacacga gaacttgcca gccagattca cagagagtta ataaaaattt ctgagggaac
781 aggattcagg atacacatga tccacaaagc agcagtggca gccaagaaat ttggacctaa
841 atcatctaaa aagtttgata ttcttgtgac tactccaaat cgactaatct atttattaaa
901 gcaagatccc cccggaatcg acctagcaag tgttgagtgg cttgtagtag acgaatcaga
961 taaactgttt gaagatggca aaactgggtt cagagaccag ctggcttcca ttttcctggc
1021 ctgcacatcc cacaaggtcc gaagagctat gttcagtgca acttttgcat atgatgttga
1081 acagtggtgc aaactcaacc tggacaatgt catcagtgtg tccattggag caaggaattc
1141 tgcagtagaa actgtagaac aagagcttct ctttgttgga tctgagaccg gaaaacttct
1201 ggccatgaga gaacttgtta aaaagggttt caatccacct gttcttgttt ttgttcagtc
1261 cattgaaagg gctaaagaac tttttcatga gctcatatat gaaggtatta atgtggatgt
1321 tattcatgca gagagaacac aacaacagag agataacaca gtccacagtt tcagagcagg
1381 aaaaatctgg gttctgattt gtacagcctt gctagcaaga gggattgatt ttaaaggtgt
1441 gaacttggtg atcaactatg actttccaac tagctcagtg gaatatatcc acaggatagg
1501 tgagttgtct tttttttcct tcccctctgt cacccactga tctgtcttag gacccctgct
1561 attccctgca catatgctca cttcttagtg ctgtgaaaat ccagtgactt ttataaatga
1621 attttgagag cctccttccc cccaaaatgt gttttttaat ggtctaattt ttcttaggtc
1681 gaactggaag agcagggaat aagggaaaag caattacatt tttcactgag gatgataagc
1741 cattattaag aaggtaaatt agaaaaaata acctagtgtt attggcaaaa ttgcttcatt
1801 attcttatat gtatattcaa ttaagagata attacaaaat ggctatgtcc caaattctac
1861 tgataatggt gttagttgac caaattttag ccatgggaaa ggaaaaatga tcaaaaggcc
1921 ttgtttttgc ccttccgtta ttagaatttg gaaatacata ttcaaaatgg aatgttcatt
1981 gtaagtttca gactcaggac tctttcaatg gttgatgtta gattttaatg tagaagatga
2041 gtttcctgca ttttgactgc ctatagtaat ttttggttga tgatgattaa cacttcacat
2101 ttctagctaa tctagttttg gccaaaggag gtttgtactt agatctgttt atcagttttg
2161 gtaaatattt tggttgtgct ttctgagctt tggctctgcc acctgtcagc ctttatatcg
2221 ctttaagcag attcaaatgt gcgtgtgtag aggggtatat tccaacaacc tagatccacc
2281 ataggcctca gcaactccaa gcatgtgaat cccatgaccc aaatattagt gtaaaactat
2341 gcacctcagt tttccatctg tgaaatgagg acagtgatag tatttacaac acaggcttgt
2401 tgtgaagagt gaagaagtta ctatacacaa aaaacttggc aacggtgcca accccatagt
2461 aggcactttc acttaatgaa tttaagcttg actctggctt cagtcagtgc ttcctccaag
2521 attgagttta ccagttttgt agggcttgat aaatgttgaa atagctgcta tctatagtta
2581 ttcatcagtg cattaatttc agcccagtgg atagttctct ctgtaatcca atgtgcttac
2641 atcaggtaat aattgataat atatcagaac actttgtgga ttactttgtg tagttttagt
2701 tccctgtaag gttgtgcaga gggtttacat tcataaacat caatttagca aagatacaag
2761 tttatgttta tgggtttctt tttcagcgtt gctaatgtta tacagcaggc tgggtgtcct
2821 gtaccaggat acataaaagg ttttcagaaa ctactaagca aacaaaagaa aaagatgatt
2881 aagaaaccat tggaaaggga gagcattagt acaactccaa aatgtttctt agaaaaagct
2941 aaggataaac agaaaaaggt cactggtcag aacagcaaga agaaagtagc tcttgaagac
3001 aaaagttaaa aacagacttt aaaaatactg tcccagaaat gtaattttat gatcccagca
3061 tgaatgttat tttcatggaa tacttgaagt cttacagtca cctgtaccaa acatttgaaa
3121 tcaactacaa gtacatggga ctggtgataa atgatcctaa actatcaagt cagtttcaat
3181 ttgtaggtgc cttttttttt tcctgtagag atgagggtct tgccatgttg tccaggctgg
3241 tcttgaactc ctgacctcac acaatcctcc tgccttagcc tcctgagtaa ctgagattac
3301 aggcacaagc tgctgcaccc agctctgtag gtgactttta aatgattata caatggaaat
3361 aacattcatt gacatttctg tggtttgaat ccagagagat acttcttata gaaaaacaaa
3421 tgtttatgct aaaaataaca ccaaaatgtg gtgaactctt aaggactttt cccttcaagt
3481 gtgaaggaag gtgtgatgaa tgctgtggag aggcatctgg aacagaaatt caaaataaag
3541 ccttgacatt
//