LOCUS AB208879 4814 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for DNA topoisomerase II, beta isozyme variant
protein.
ACCESSION AB208879
VERSION AB208879.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4814)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..4814
/clone="pj02337"
/db_xref="H-InvDB:HIT000328814"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003000199"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1470..4499
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="DNA topoisomerase II, beta isozyme variant"
/protein_id="BAD92116.1"
/translation="RMEKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRY
AGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDF
INKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSA
YHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLA
RLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREI
VNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQYAVSGEIFVVDRNTVEITELPVRT
WTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKV
FKLQTTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAEST
KLNNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQ
NQHDDSSSDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSD
LWKEDLAAFVEELDKVESQEREDVLAGMSGKAIKGKVGKPKVKKLQLEETMPSPYGRR
IIPEITAMKADASKKLLKKKKGDLDTAAVKVEFDEEFSGAPVEGAGEEALTPSVPINK
GPKPKREKKEPGTRVRKTPTSSGKPSAKKVKKRNPWSDDESKSESDLEETEPVVIPRD
SLLRRAAAERPKYTFDFSEEEDDDADDDDDDNNDLEELKVKASPITNDGEDEFVPSDG
LDKDEYTFSPGKSKATPEKSLHDKKSQDFGNLFSFPSYSQKSEDDSAKFDSNEEDSAS
VFSPSFGLKQTDKVPSKTVAAKKGKPSSDTVPKPKRAPKQKKVVEAVNSDSDSEFGIP
KKTTTPKGKGRGAKKRKASGSENEGDYNPGRKTSKTTSKKPKKTSFDQDSDVDIFPSD
FPTEPPSLPRTGRARKEVKYFAESDEEEDDVDFAMFN"
BASE COUNT 1660 a 776 c 1040 g 1338 t
ORIGIN
1 gtttctattg atcctgaatc taacattata agcatttgga ataatgggaa aggcattcca
61 gtagtagaac acaaggtaga gaaagtttat gttcctgctt taatttttgg acagctttta
121 acatccagta actatgatga tgatgagaaa aaagttacag gtggtcgtaa tggttatggt
181 gcaaaacttt gtaatatttt cagtacaaag tttacagtag aaacagcttg caaagaatac
241 aaacacagtt ttaagcagac atggatgaat aatatgatga agacttctga agccaaaatt
301 aaacattttg atggtgaaga ttacacatgc ataacattcc aaccagatct gtccaaattt
361 aagatggaaa aacttgacaa ggatattgtg gccctcatga ctagaagggc atatgatttg
421 gctggttcgt gtagaggggt caaggtcatg tttaatggaa agaaattgcc tgtaaatgga
481 tttcgcagtt atgtagatct ttatgtgaaa gacaaattgg atgaaactgg ggtggccctg
541 aaagttattc atgagcttgc aaatgaaaga tgggatgttt gtctcacatt gagtgaaaaa
601 ggattccagc aaatcagctt tgtaaatagt attgcaacta caaaaggtgg acggcacgtg
661 gattatgtgg tagatcaagt tgttggtaaa ctgattgaag tagttaagaa aaagaacaaa
721 gctggtgtat cagtgaaacc atttcaagta aaaaaccata tatgggtttt tattaattgc
781 cttattgaaa atccaacttt tgattctcag actaaggaaa acatgactct gcagcccaaa
841 agttttgggt ctaaatgcca gctgtcagaa aaatttttta aagcagcctc taattgtggc
901 attgtagaaa gtatcctgaa ctgggtgaaa tttaaggctc agactcagct gaataagaag
961 tgttcatcag taaaatacag taaaatcaaa ggtattccca aactggatga tgctaatgat
1021 gctggtggta aacattccct ggagtgtaca ctgatattaa cagagggaga ctctgccaaa
1081 tcactggctg tgtctggatt aggtgtgatt ggacgagaca gatacggagt ttttccactc
1141 aggggcaaaa ttcttaatgt acgggaagct tctcataaac agatcatgga aaatgctgaa
1201 ataaataata ttattaaaat agttggtcta caatataaga aaagttacga tgatgcagaa
1261 tctctgaaaa ccttacgcta tggaaagatt atgattatga ccgatcagga tcaagatggt
1321 tctcacataa aaggcctgct tattaatttc atccatcaca attggccatc acttttgaag
1381 catggttttc ttgaagagtt cattactcct attgtaaagg caagcaaaaa taagcaggaa
1441 ctttccttct acagtattcc tgaatttgac gaatggaaaa acatatagaa aaccagaaag
1501 cctggaaaat aaagtactat aaaggattgg gtactagtac agctaaagaa gcaaaggaat
1561 attttgctga tatggaaagg catcgcatct tgtttagata tgctggtcct gaagatgatg
1621 ctgccattac cttggcattt agtaagaaga agattgatga cagaaaagaa tggttaacaa
1681 attttatgga agaccggaga cagcgtaggc tacatggctt accagagcaa tttttatatg
1741 gtactgcaac aaagcatttg acttataatg atttcatcaa caaggaattg attctcttct
1801 caaactcaga caatgaaaga tctataccat ctcttgttga tggctttaaa cctggccagc
1861 ggaaagtttt atttacctgt ttcaagagga atgataaacg tgaagtaaaa gttgcccagt
1921 tggctggctc tgttgctgag atgtcggctt atcatcatgg agaacaagca ttgatgatga
1981 ctattgtgaa tttggctcag aactttgtgg gaagtaacaa cattaacttg cttcagccta
2041 ttggtcagtt tggaactcgg cttcatggtg gcaaagatgc tgcaagccct cgttatattt
2101 tcacaatgtt aagcacttta gcaaggctac tttttcctgc tgtggatgac aacctcctta
2161 agttccttta tgatgataat caacgtgtag agcctgagtg gtatattcct ataattccca
2221 tggttttaat aaatggtgct gagggcattg gtactggatg ggcttgtaaa ctacccaact
2281 atgatgctag ggaaattgtg aacaatgtca gacgaatgct agatggcctg gatcctcatc
2341 ccatgcttcc aaactacaaa aactttaaag gcacgattca agaacttggt caaaaccagt
2401 atgcagtcag tggtgaaata tttgtagtgg acagaaacac agtagaaatt acagagcttc
2461 cagttagaac ttggacacag gtatataaag aacaggtttt agaacctatg ctaaatggaa
2521 cagataaaac accagcatta atttctgatt ataaagaata tcatactgac acaactgtga
2581 aatttgtggt gaaaatgact gaagagaaac tagcacaagc agaagctgct ggactgcata
2641 aagtttttaa acttcaaact actcttactt gtaattccat ggtacttttt gatcatatgg
2701 gatgtctgaa gaaatatgaa actgtgcaag acattctgaa agaattcttt gatttacgat
2761 taagttatta cggtttacgt aaggagtggc ttgtgggaat gttgggagca gaatctacaa
2821 agcttaacaa tcaagcccgt ttcattttag agaagataca agggaaaatt actatagaga
2881 ataggtcaaa gaaagatttg attcaaatgt tagtccagag aggttatgaa tctgacccag
2941 tgaaagcctg gaaagaagca caagaaaagg cagcagaaga ggatgaaaca caaaaccagc
3001 atgatgatag ttcctccgat tcaggaactc cttcaggccc agattttaat tatattttaa
3061 atatgtctct gtggtctctt actaaagaaa aagttgaaga actgattaaa cagagagatg
3121 caaaagggcg agaggtcaat gatcttaaaa gaaaatctcc ttcagatctt tggaaagagg
3181 atttagcggc atttgttgaa gaactggata aagtggaatc tcaagaacga gaagatgttc
3241 tggctggaat gtctggaaaa gcaattaaag gtaaagttgg caaacctaag gtgaagaaac
3301 tccagttgga agagacaatg ccctcacctt atggcagaag aataattcct gaaattacag
3361 ctatgaaggc agatgccagc aaaaagttgc tgaagaagaa gaagggtgat cttgatactg
3421 cagcagtaaa agtggaattt gatgaagaat tcagtggagc accagtagaa ggtgcaggag
3481 aagaggcatt gactccatca gttcctataa ataaaggtcc caaacctaag agggagaaga
3541 aggagcctgg taccagagtg agaaaaacac ctacatcatc tggtaaacct agtgcaaaga
3601 aagtgaagaa acggaatcct tggtcagatg atgaatccaa gtcagaaagt gatttggaag
3661 aaacagaacc tgtggttatt ccaagagatt ctttgcttag gagagcagca gccgaaagac
3721 ctaaatacac atttgatttc tcagaagaag aggatgatga tgctgatgat gatgatgatg
3781 acaataatga tttagaggaa ttgaaagtta aagcatctcc cataacaaat gatggggaag
3841 atgaatttgt tccttcagat gggttagata aagatgaata tacattttca ccaggcaaat
3901 caaaagccac tccagaaaaa tctttgcatg acaaaaaaag tcaggatttt ggaaatctct
3961 tctcatttcc ttcatattct cagaagtcag aagatgattc agctaaattt gacagtaatg
4021 aagaagattc tgcttctgtt ttttcaccat catttggtct gaaacagaca gataaagttc
4081 caagtaaaac ggtagctgct aaaaagggaa aaccgtcttc agatacagtc cctaagccca
4141 agagagcccc aaaacagaag aaagtagtag aggctgtaaa ctctgactcg gattcagaat
4201 ttggcattcc aaagaagact acaacaccaa aaggtaaagg ccgaggggca aagaaaagga
4261 aagcatctgg ctctgaaaat gaaggcgatt ataaccctgg caggaaaaca tccaaaacaa
4321 caagcaagaa accgaagaag acatcttttg atcaggattc agatgtggac atcttcccct
4381 cagacttccc tactgagcca ccttctctgc cacgaaccgg tcgggctagg aaagaagtaa
4441 aatattttgc agagtctgat gaagaagaag atgatgttga ttttgcaatg tttaattaag
4501 tgcccaaaga gcacaaacat ttttcaacaa atatcttgtg ttgtcctttt gtcttctctg
4561 tctcagactt ttgtacatct ggcttatttt aatgtgatga tgtaattgac ggttttttat
4621 tattgtggta ggccttttaa cattttgttc ttacacatac agttttatgc tcttttttac
4681 tcattgaaat gtcacgtact gtctgattgg cttgtagaat tgttatagac tgccgtgcat
4741 tagcacagat tttaattgtc atggttacaa actacagacc tgctttttga aatgaaattt
4801 aaacattaaa aatg
//