LOCUS AB208846 5150 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for Apolipoprotein B variant protein. ACCESSION AB208846 VERSION AB208846.1 KEYWORDS FLI_CDNA. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5150) AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A., Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F. TITLE Direct Submission JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Osamu Ohara Kazusa DNA Research Institute, Department of Human Gene Research; 2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan URL :http://protein.gsc.riken.go.jp/ REFERENCE 2 AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A., Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F. TITLE Homo sapiens protein coding cDNA JOURNAL Published Only in Database(2005) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis , Ministry of Education, Culture , Sports, Science and Technology of Japan. Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S. RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi, Yokohama 230-0045, Japan. URL: http://protein.gsc.riken.go.jp/ FEATURES Location/Qualifiers source 1..5150 /clone="fh25089" /db_xref="H-InvDB:HIT000328781" /db_xref="taxon:9606" /mol_type="mRNA" /note="this clone is also named as hsk003000145" /note="vector:pBluescriptII SK plus" /organism="Homo sapiens" /tissue_type="brain" CDS <1..4850 /codon_start=3 /inference="non-experimental evidence, no additional details recorded" /note="Start codon is not identified." /product="Apolipoprotein B variant" /protein_id="BAD92083.1" /translation="TIEGPLTSFGLSNKINSKHLRVNQNLVYESGSLNFSKLEIQSQV DSQHVGHSVLTAKGMALFGEGKAEFTGRHDAHLNGKVIGTLKNSLFFSAQPFEITAST NNEGNLKVRFPLRLTGKIDFLNNYALFLSPSAQQASWQVSARFNQYKYNQNFSAGNNE NIMEAHVGINGEANLDFLNIPLTIPEMRLPYTIITTPPLKDFSLWEKTGLKEFLKTTK QSFDLSVKAQYKKNKHRHSITNPLAVLCEFISQSIKSFDRHFEKNRNNALDFVTKSYN ETKIKFDKYKAEKSHDELPRTFQIPGYTVPVVNVEVSPFTIEMSAFGYVFPKAVSMPS FSILGSDVRVPSYTLILPSLELPVLHVPRNLKLSLPDFKELCTISHIFIPAMGNITYD FSFKSSVITLNTNAELFNQSDIVAHLLSSSSSVIDALQYKLEGTTRLTRKRGLKLATA LSLSNKFVEGSHNSTVSLTTKNMEVSVATTTKAQIPILRMNFKQELNGNTKSKPTVSS SMEFKYDFNSSMLYSTAKGAVDHKLSLESLTSYFSIESSTKGDVKGSVLSREYSGTIA SEANTYLNSKSTRSSVKLQGTSKIDDIWNLEVKENFAGEATLQRIYSLWEHSTKNHLQ LEGLFFTNGEHTSKATLELSPWQMSALVQVHASQPSSFHDFPDLGQEVALNANTKNQK IRWKNEVRIHSGSFQSQVELSNDQEKAHLDIAGSLEGHLRFLKNIILPVYDKSLWDFL KLDVTTSIGRRQHLRVSTAFVYTKNPNGYSFSIPVKVLADKFIIPGLKLNDLNSVLVM PTFHVPFTDLQVPSCKLDFREIQIYKKLRTSSFALNLPTLPEVKFPEVDVLTKYSQPE DSLIPFFEITVPESQLTVSQFTLPKSVSDGIAALDLNAVANKIADFELPTIIVPEQTI EIPSIKFSVPAGIVIPSFQALTARFEVDSPVYNATWSASLKNKADYVETVLDSTCSST VQFLEYELNVLGTHKIEDGTLASKTKGTFAHRDFSAEYEEDGKYEGLQEWEGKAHLNI KSPAFTDLHLRYQKDKKGISTSAASPAVGTVGMDMDEDDDFSKWNFYYSPQSSPDKKL TIFKTELRVRESDEETQIKVNWEEEAASGLLTSLKDNVPKATGVLYDYVNKYHWEHTG LTLREVSSKLRRNLQNNAEWVYQGAIRQIDDIDVRFQKAASGTTGTYQEWKDKAQNLY QELLTQEGQASFQGLKDNVFDGLVRVTQEFHMKVKHLIDSLIDFLNFPRFQFPGKPGI YTREELCTMFIREVGTVLSQVYSKVHNGSEILFSYFQDLVITLPFELRKHKLIDVISM YRELLKDLSKEAQEVFKAIQSLKTTEVLRNLQDLLQFIFQLIEDNIKQLKEMKFTYLI NYIQDEINTIFSDYIPYVFKLLKENLCLNLHKFNEFIQNELQEASQELQQIHQYIMAL REEYFDPSIVGWTVKYYELEEKIVSLIKNLLVALKDFHSEYIVSASNFTSQLSSQVEQ FLHRNIQEYLSILTDPDGKGKEKIAELSATAQEIIKSQTIATKKIISDYHQQFRYKLQ DFSDQLSDYYEKFIAESKRLIDLSIQNYHTFLIYITELLKKLQSTTVMNPYMKLAPGE LTIIL" BASE COUNT 1637 a 1131 c 990 g 1392 t ORIGIN 1 tcaccataga aggacccctc acttcctttg gactgtccaa taagatcaat agcaaacacc 61 taagagtaaa ccaaaacttg gtttatgaat ctggctccct caacttttct aaacttgaaa 121 ttcaatcaca agtcgattcc cagcatgtgg gccacagtgt tctaactgct aaaggcatgg 181 cactgtttgg agaagggaag gcagagttta ctgggaggca tgatgctcat ttaaatggaa 241 aggttattgg aactttgaaa aattctcttt tcttttcagc ccagccattt gagatcacgg 301 catccacaaa caatgaaggg aatttgaaag ttcgttttcc attaaggtta acagggaaga 361 tagacttcct gaataactat gcactgtttc tgagtcccag tgcccagcaa gcaagttggc 421 aagtaagtgc taggttcaat cagtataagt acaaccaaaa tttctctgct ggaaacaacg 481 agaacattat ggaggcccat gtaggaataa atggagaagc aaatctggat ttcttaaaca 541 ttcctttaac aattcctgaa atgcgtctac cttacacaat aatcacaact cctccactga 601 aagatttctc tctatgggaa aaaacaggct tgaaggaatt cttgaaaacg acaaagcaat 661 catttgattt aagtgtaaaa gctcagtata agaaaaacaa acacaggcat tccatcacaa 721 atcctttggc tgtgctttgt gagtttatca gtcagagcat caaatccttt gacaggcatt 781 ttgaaaaaaa cagaaacaat gcattagatt ttgtcaccaa atcctataat gaaacaaaaa 841 ttaagtttga taagtacaaa gctgaaaaat ctcacgacga gctccccagg acctttcaaa 901 ttcctggata cactgttcca gttgtcaatg ttgaagtgtc tccattcacc atagagatgt 961 cggcattcgg ctatgtgttc ccaaaagcag tcagcatgcc tagtttctcc atcctaggtt 1021 ctgacgtccg tgtgccttca tacacattaa tcctgccatc attagagctg ccagtccttc 1081 atgtccctag aaatctcaag ctttctcttc cagatttcaa ggaattgtgt accataagcc 1141 atatttttat tcctgccatg ggcaatatta cctatgattt ctcctttaaa tcaagtgtca 1201 tcacactgaa taccaatgct gaacttttta accagtcaga tattgttgct catctccttt 1261 cttcatcttc atctgtcatt gatgcactgc agtacaaatt agagggcacc acaagattga 1321 caagaaaaag gggattgaag ttagccacag ctctgtctct gagcaacaaa tttgtggagg 1381 gtagtcataa cagtactgtg agcttaacca cgaaaaatat ggaagtgtca gtggcaacaa 1441 ccacaaaagc ccaaattcca attttgagaa tgaatttcaa gcaagaactt aatggaaata 1501 ccaagtcaaa acctactgtc tcttcctcca tggaatttaa gtatgatttc aattcttcaa 1561 tgctgtactc taccgctaaa ggagcagttg accacaagct tagcttggaa agcctcacct 1621 cttacttttc cattgagtca tctaccaaag gagatgtcaa gggttcggtt ctttctcggg 1681 aatattcagg aactattgct agtgaggcca acacttactt gaattccaag agcacacggt 1741 cttcagtgaa gctgcagggc acttccaaaa ttgatgatat ctggaacctt gaagtaaaag 1801 aaaattttgc tggagaagcc acactccaac gcatatattc cctctgggag cacagtacga 1861 aaaaccactt acagctagag ggcctctttt tcaccaacgg agaacataca agcaaagcca 1921 ccctggaact ctctccatgg caaatgtcag ctcttgttca ggtccatgca agtcagccca 1981 gttccttcca tgatttccct gaccttggcc aggaagtggc cctgaatgct aacactaaga 2041 accagaagat cagatggaaa aatgaagtcc ggattcattc tgggtctttc cagagccagg 2101 tcgagctttc caatgaccaa gaaaaggcac accttgacat tgcaggatcc ttagaaggac 2161 acctaaggtt cctcaaaaat atcatcctac cagtctatga caagagctta tgggatttcc 2221 taaagctgga tgtaaccacc agcattggta ggagacagca tcttcgtgtt tcaactgcct 2281 ttgtgtacac caaaaacccc aatggctatt cattctccat ccctgtaaaa gttttggctg 2341 ataaattcat tattcctggg ctgaaactaa atgatctaaa ttcagttctt gtcatgccta 2401 cgttccatgt cccatttaca gatcttcagg ttccatcgtg caaacttgac ttcagagaaa 2461 tacaaatcta taagaagctg agaacttcat catttgccct caacctacca acactccccg 2521 aggtaaaatt ccctgaagtt gatgtgttaa caaaatattc tcaaccagaa gactccttga 2581 ttcccttttt tgagataacc gtgcctgaat ctcagttaac tgtgtcccag ttcacgcttc 2641 caaaaagtgt ttcagatggc attgctgctt tggatctaaa tgcagtagcc aacaagatcg 2701 cagactttga gttgcccacc atcatcgtgc ctgagcagac cattgagatt ccctccatta 2761 agttctctgt acctgctgga attgtcattc cttcctttca agcactgact gcacgctttg 2821 aggtagactc tcccgtgtat aatgccactt ggagtgccag tttgaaaaac aaagcagatt 2881 atgttgaaac agtcctggat tccacatgca gctcaaccgt acagttccta gaatatgaac 2941 taaatgtttt gggaacacac aaaatcgaag atggtacgtt agcctctaag actaaaggaa 3001 catttgcaca ccgtgacttc agtgcagaat atgaagaaga tggcaaatat gaaggacttc 3061 aggaatggga aggaaaagcg cacctcaata tcaaaagccc agcgttcacc gatctccatc 3121 tgcgctacca gaaagacaag aaaggcatct ccacctcagc agcctcccca gccgtaggca 3181 ccgtgggcat ggatatggat gaagatgacg acttttctaa atggaacttc tactacagcc 3241 ctcagtcctc tccagataaa aaactcacca tattcaaaac tgagttgagg gtccgggaat 3301 ctgatgagga aactcagatc aaagttaatt gggaagaaga ggcagcttct ggcttgctaa 3361 cctctctgaa agacaacgtg cccaaggcca caggggtcct ttatgattat gtcaacaagt 3421 accactggga acacacaggg ctcaccctga gagaagtgtc ttcaaagctg agaagaaatc 3481 tgcagaacaa tgctgagtgg gtttatcaag gggccattag gcaaattgat gatatcgacg 3541 tgaggttcca gaaagcagcc agtggcacca ctgggaccta ccaagagtgg aaggacaagg 3601 cccagaatct gtaccaggaa ctgttgactc aggaaggcca agccagtttc cagggactca 3661 aggataacgt gtttgatggc ttggtacgag ttactcaaga attccatatg aaagtcaagc 3721 atctgattga ctcactcatt gattttctga acttccccag attccagttt ccggggaaac 3781 ctgggatata cactagggag gaactttgca ctatgttcat aagggaggta gggacggtac 3841 tgtcccaggt atattcgaaa gtccataatg gttcagaaat actgttttcc tatttccaag 3901 acctagtgat tacacttcct ttcgagttaa ggaaacataa actaatagat gtaatctcga 3961 tgtataggga actgttgaaa gatttatcaa aagaagccca agaggtattt aaagccattc 4021 agtctctcaa gaccacagag gtgctacgta atcttcagga ccttttacaa ttcattttcc 4081 aactaataga agataacatt aaacagctga aagagatgaa atttacttat cttattaatt 4141 atatccaaga tgagatcaac acaatcttca gtgattatat cccatatgtt tttaaattgt 4201 tgaaagaaaa cctatgcctt aatcttcata agttcaatga atttattcaa aacgagcttc 4261 aggaagcttc tcaagagtta cagcagatcc atcaatacat tatggccctt cgtgaagaat 4321 attttgatcc aagtatagtt ggctggacag tgaaatatta tgaacttgaa gaaaagatag 4381 tcagtctgat caagaacctg ttagttgctc ttaaggactt ccattctgaa tatattgtca 4441 gtgcctctaa ctttacttcc caactctcaa gtcaagttga gcaatttctg cacagaaata 4501 ttcaggaata tcttagcatc cttaccgatc cagatggaaa agggaaagag aagattgcag 4561 agctttctgc cactgctcag gaaataatta aaagccagac cattgcgacg aagaaaataa 4621 tttctgatta ccaccagcag tttagatata aactgcaaga tttttcagac caactctctg 4681 attactatga aaaatttatt gctgaatcca aaagattgat tgacctgtcc attcaaaact 4741 accacacatt tctgatatac atcacggagt tactgaaaaa gctgcaatca accacagtca 4801 tgaaccccta catgaagctt gctccaggag aacttactat catcctctaa ttttttaaaa 4861 gaaatcttca tttattcttc ttttccaatt gaactttcac atagcacaga aaaaattcaa 4921 actgcctata ttgataaaac catacagtga gccagccttg cagtaggcag tagactataa 4981 gcagaagcac atatgaactg gacctgcacc aaagctggca ccagggctcg gaaggtctct 5041 gaactcagaa ggatggcatt ttttgcaagt taaagaaaat caggatctga gttattttgc 5101 taaacttggg ggaggaggaa caaataaatg gagtctttat tgtgtatcat //