LOCUS AB208842 5199 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for Integrin alpha-6 precursor variant protein.
ACCESSION AB208842
VERSION AB208842.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5199)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..5199
/clone="fh16374"
/db_xref="H-InvDB:HIT000328777"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003000140"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1477..3177
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="Integrin alpha-6 precursor variant"
/protein_id="BAD92079.1"
/translation="KERRKSGLSSRVQFRNQGSEPKYTQELTLKRQKQKVCMEETLWL
QDNIRDKLRPIPITASVEIQEPSSRRRVNSLPEVLPILNSDEPKTAHIDVHFLKEGCG
DDNVCNSNLKLEYKFCTREGNQDKFSYLPIQKGVPELVLKDQKDIALEITVTNSPSNP
RNPTKDGDDAHEAKLIATFPDTLTYSAYRELRAFPEKQLSCVANQNGSQADCELGNPF
KRNSNVTFYLVLSTTEVTFDTPDLDINLKLETTSNQDNLAPITAKAKVVIELLLSVSG
VAKPSQVYFGGTVVGEQAMKSEDEVGSLIEYEFRVINLGKPLTNLGTATLNIQWPKEI
SNGKWLLYLVKVESKGLEKVTCEPQKEINSLNLTESHNSRKKREITEKQIDDNRKFSL
FAERKYQTLNCSVNVNCVNIRCPLRGLDSKASLILRSRLWNSTFLEEYSKLNYLDILM
RAFIDVTAAAENIRLPNAGTQVRVTVFPSKTVAQYSGVPWWIILVAILAGILMLALLV
FILWKCGFFKRSRYDDSVPRYHAVRIRKEEREIKDEKYIDNLEKKQWITKWNENESYS
"
BASE COUNT 1563 a 977 c 1152 g 1507 t
ORIGIN
1 gatccggaaa tatggagacc ccgggagcct cttcggcttc tcgctggcca tgcactggca
61 actgcagccc gaggacaagc ggctgttgct cgtgggggcc ccgcgggcag aagcgcttcc
121 actgcagaga gccaacagaa cgggagggct gtacagctgc gacatcaccg cccgggggcc
181 atgcacgcgg atcgagtttg ataacgatgc tgaccccacg tcagaaagca aggaagatca
241 gtggatgggg gtcaccgtcc agagccaagg tccagggggc aaggtcgtga catgtgctca
301 ccgatatgaa aaaaggcagc atgttaatac gaagcaggaa tcccgagaca tctttgggcg
361 gtgttatgtc ctgagtcaga atctcaggat tgaagacgat atggatgggg gagattggag
421 cttttgtgat gggcgattga gaggccatga gaaatttggc tcttgccagc aaggtgtagc
481 agctactttt actaaagact ttcattacat tgtatttgga gccccgggta cttataactg
541 gaaagggatt gttcgtgtag agcaaaagaa taacactttt tttgacatga acatctttga
601 agatgggcct tatgaagttg gtggagagac tgagcatgat gaaagtctcg ttcctgttcc
661 tgctaacagt tacttaggtt tttctttgga ctcagggaaa ggtattgttt ctaaagatga
721 gatcactttt gtatctggtg ctcccagagc caatcacagt ggagccgtgg ttttgctgaa
781 gagagacatg aagtctgcac atctcctccc tgagcacata ttcgatggag aaggtctggc
841 ctcttcattt ggctatgatg tggcggtggt ggacctcaac aaggatgggt ggcaagatat
901 agttattgga gccccacagt attttgatag agatggagaa gttggaggtg cagtgtatgt
961 ctacatgaac cagcaaggca gatggaataa tgtgaagcca attcgtctta atggaaccaa
1021 agattctatg tttggcattg cagtaaaaaa tattggagat attaatcaag atggctaccc
1081 agatattgca gttggagctc cgtatgatga cttgggaaag gtttttatct atcatggatc
1141 tgcaaatgga ataaatacca aaccaacaca ggttctcaag ggtatatcac cttattttgg
1201 atattcaatt gctggaaaca tggaccttga tcgaaattcc taccctgatg ttgctgttgg
1261 ttccctctca gattcagtaa ctattttcag atcccggcct gtgattaata ttcagaaaac
1321 catcacagta actcctaaca gaattgacct ccgccagaaa acagcgtgtg gggcgcctag
1381 tgggatatgc ctccaggtta aatcctgttt tgaatatact gctaaccccg ctggttataa
1441 tccttcaata tcaattgtgg gcacacttga agctgaaaag aaagaagaaa atctgggcta
1501 tcctcaagag ttcagtttcg aaaccaaggt tctgagccca aatatactca agaactaact
1561 ctgaagaggc agaaacagaa agtgtgcatg gaggaaaccc tgtggctaca ggataatatc
1621 agagataaac tgcgtcccat tcccataact gcctcagtgg agatccaaga gccaagctct
1681 cgtaggcgag tgaattcact tccagaagtt cttccaattc tgaattcaga tgaacccaag
1741 acagctcata ttgatgttca cttcttaaaa gagggatgtg gagacgacaa tgtatgtaac
1801 agcaacctta aactagaata taaattttgc acccgagaag gaaatcaaga caaattttct
1861 tatttaccaa ttcaaaaagg tgtaccagaa ctagttctaa aagatcagaa ggatattgct
1921 ttagaaataa cagtgacaaa cagcccttcc aacccaagga atcccacaaa agatggcgat
1981 gacgcccatg aggctaaact gattgcaacg tttccagaca ctttaaccta ttctgcatat
2041 agagaactga gggctttccc tgagaaacag ttgagttgtg ttgccaacca gaatggctcg
2101 caagctgact gtgagctcgg aaatcctttt aaaagaaatt caaatgtcac tttttatttg
2161 gttttaagta caactgaagt cacctttgac accccagatc tggatattaa tctgaagtta
2221 gaaacaacaa gcaatcaaga taatttggct ccaattacag ctaaagcaaa agtggttatt
2281 gaactgcttt tatcggtctc gggagttgct aaaccttccc aggtgtattt tggaggtaca
2341 gttgttggcg agcaagctat gaaatctgaa gatgaagtgg gaagtttaat agagtatgaa
2401 ttcagggtaa taaacttagg taaacctctt acaaacctcg gcacagcaac cttgaacatt
2461 cagtggccaa aagaaattag caatgggaaa tggttgcttt atttggtgaa agtagaatcc
2521 aaaggattgg aaaaggtaac ttgtgagcca caaaaggaga taaactccct gaacctaacg
2581 gagtctcaca actcaagaaa gaaacgggaa attactgaaa aacagataga tgataacaga
2641 aaattttctt tatttgctga aagaaaatac cagactctta actgtagcgt gaacgtgaac
2701 tgtgtgaaca tcagatgccc gctgcggggg ctggacagca aggcgtctct tattttgcgc
2761 tcgaggttat ggaacagcac atttctagag gaatattcca aactgaacta cttggacatt
2821 ctcatgcgag ccttcattga tgtgactgct gctgccgaaa atatcaggct gccaaatgca
2881 ggcactcagg ttcgagtgac tgtgtttccc tcaaagactg tagctcagta ttcgggagta
2941 ccttggtgga tcatcctagt ggctattctc gctgggatct tgatgcttgc tttattagtg
3001 tttatactat ggaagtgtgg attctttaaa cgctctaggt acgatgacag tgttccccga
3061 taccatgctg taaggatccg gaaagaagag cgagagatca aagatgaaaa gtatattgat
3121 aaccttgaaa aaaaacagtg gatcacaaag tggaacgaaa atgaaagcta ctcatagcgg
3181 gggcctaaaa aaaaaaagct tcacagtacc caaactgctt tttccaactc agaaattcaa
3241 tttggattta aaagcctgct caatccctga ggactgattt cagagtgact acacacagta
3301 cgaacctaca gttttaactg tggatattgt tacgtagcct aaggctcctg ttttgcacag
3361 ccaaatttaa aactgttgga atggattttt ctttaactgc cgtaatttaa ctttctgggt
3421 tgcctttatt tttggcgtgg ctgacttaca tcatgtgttg gggaagggcc tgcccagttg
3481 cactcaggtg acatcctcca gatagtgtag ctgaggaggc acctacactc acctgcacta
3541 acagagtggc cgtcctaacc tcgggcctgc tgcgcagacg tccatcacgt tagctgtccc
3601 acatcacaag actatgccat tggggtagtt gtgtttcaac ggaaagtgct gtcttaaact
3661 aaatgtgcaa tagaaggtga tgttgccatc ctaccgtctt ttcctgtttc ctagctgtgt
3721 gaatacctgc tcacgtcaaa tgcatacaag tttcattctc cctttcacta aaacacacag
3781 gtgcaacaga cttgaatgct agttatactt atttgtatat ggtatttatt ttttcttttc
3841 tttacaaacc attttgttat tgactaacag gccaaagagt ctccagttta cccttcaggt
3901 tggtttaatc aatcagaatt agagcatggg aggtcatcac tttgacctaa attatttact
3961 gcaaaaagaa aatctttata aatgtaccag agagagttgt tttaataact tatctataaa
4021 ctataacctc tccttcatga cagcctccac cccacaaccc aaaaggttta agaaatagaa
4081 ttataactgt aaagatgttt atttcaggca ttggatattt tttactttag aagcctgcat
4141 aatgtttctg gatttcatac tgtaacattc aggaattctt ggagaaaatg ggtttattca
4201 ctgaactcta gtgcggttta ctcactgctg caaatactgt atattcagga cttgaaagaa
4261 atggtgaatg cctatggtgg atccaaactg atccagtata agactactga atctgctacc
4321 aaaacagtta atcagtgagt cgatgttcta ttttttgttt tgtttcctcc cctatctgta
4381 ttcccaaaaa ttactttggg gctaatttaa caagaacttt aaattgtgtt ttaattgtaa
4441 aaatggcagg gggtggaatt attactctat acattcaaca gagactgaat agatatgaaa
4501 gctgattttt tttaattacc atgcttcaca atgttaagtt atatggggag caacagcaaa
4561 caggtgctaa tttgttttgg atatagtata agcagtgtct gtgttttgaa agaatagaac
4621 acagtttgta gtgccactgt tgttttgggg gggctttttt cttttcggaa atcttaaacc
4681 ttaagatact aaggacgttg ttttggttgt actttggaat tcttagtcac aaaatatatt
4741 ttgtttacaa aaatttctgt aaaacaggtt ataacagtgt ttaaagtctc agtttcttgc
4801 ttggggaact tgtgtcccta atgtgtttag attgctagat tgctaaggag ctgatacttt
4861 gacagtgttt ttagacctgt gttactaaaa aaaagatgaa tgtcctgaaa agggtgttgg
4921 gagggtggtt caacaaagaa acaaagatgt tatggtgttt agatttatgg ttgttaaaaa
4981 tgtcatctca agtcaagtca ctggtctgtt tgcatttgat acatttttgt actaactagc
5041 attgtaaaat tatttcatga ttagaaatta cctgtggata tttgtataaa agtgtgaaat
5101 aaatttttta taaaagtgtt cattgtttcg taacacagca ttgtatatgt gaagcaaact
5161 ctaaaattat aaatgacaac ctgaattatc tatttcatc
//