LOCUS AB208836 6801 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for dystrophin Dp427c isoform variant protein.
ACCESSION AB208836
VERSION AB208836.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6801)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..6801
/clone="fg00167"
/db_xref="H-InvDB:HIT000328771"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003000134"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1..4181
/codon_start=3
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="dystrophin Dp427c isoform variant"
/protein_id="BAD92073.1"
/translation="NLQWIKVSRALPEKQGEIEAQIKDLGQLEKKLEDLEEQLNHLLL
WLSPIRNQLEIYNQPNQEGPFDVQETEIAVQAKQPDVEEILSKGQHLYKEKPATQPVK
RKLEDLSSEWKAVNRLLQELRAKQPDLAPGLTTIGASPTQTVTLVTQPVVTKETAISK
LEMPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKAT
MQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQ
LNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQ
WQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL
LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH
TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ
WKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMS
TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHS
ADWQRKIDETLERLRELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKA
LRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQL
HEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLA
DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCL
TTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE
DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA
NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS
LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYF
AKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLND
SISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEE
ENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE
ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV
VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAM
ESLVSVMTDEEGAE"
BASE COUNT 2105 a 1420 c 1455 g 1821 t
ORIGIN
1 caaatctcca gtggataaag gtttccagag ctttacctga gaaacaagga gaaattgaag
61 ctcaaataaa agaccttggg cagcttgaaa aaaagcttga agaccttgaa gagcagttaa
121 atcatctgct gctgtggtta tctcctatta ggaatcagtt ggaaatttat aaccaaccaa
181 accaagaagg accatttgac gttcaggaaa ctgaaatagc agttcaagct aaacaaccgg
241 atgtggaaga gattttgtct aaagggcagc atttgtacaa ggaaaaacca gccactcagc
301 cagtgaagag gaagttagaa gatctgagct ctgagtggaa ggcggtaaac cgtttacttc
361 aagagctgag ggcaaagcag cctgacctag ctcctggact gaccactatt ggagcctctc
421 ctactcagac tgttactctg gtgacacaac ctgtggttac taaggaaact gccatctcca
481 aactagaaat gccatcttcc ttgatgttgg aggtacctgc tctggcagat ttcaaccggg
541 cttggacaga acttaccgac tggctttctc tgcttgatca agttataaaa tcacagaggg
601 tgatggtggg tgaccttgag gatatcaacg agatgatcat caagcagaag gcaacaatgc
661 aggatttgga acagaggcgt ccccagttgg aagaactcat taccgctgcc caaaatttga
721 aaaacaagac cagcaatcaa gaggctagaa caatcattac ggatcgaatt gaaagaattc
781 agaatcagtg ggatgaagta caagaacacc ttcagaaccg gaggcaacag ttgaatgaaa
841 tgttaaagga ttcaacacaa tggctggaag ctaaggaaga agctgagcag gtcttaggac
901 aggccagagc caagcttgag tcatggaagg agggtcccta tacagtagat gcaatccaaa
961 agaaaatcac agaaaccaag cagttggcca aagacctccg ccagtggcag acaaatgtag
1021 atgtggcaaa tgacttggcc ctgaaacttc tccgggatta ttctgcagat gataccagaa
1081 aagtccacat gataacagag aatatcaatg cctcttggag aagcattcat aaaagggtga
1141 gtgagcgaga ggctgctttg gaagaaactc atagattact gcaacagttc cccctggacc
1201 tggaaaagtt tcttgcctgg cttacagaag ctgaaacaac tgccaatgtc ctacaggatg
1261 ctacccgtaa ggaaaggctc ctagaagact ccaagggagt aaaagagctg atgaaacaat
1321 ggcaagacct ccaaggtgaa attgaagctc acacagatgt ttatcacaac ctggatgaaa
1381 acagccaaaa aatcctgaga tccctggaag gttccgatga tgcagtcctg ttacaaagac
1441 gtttggataa catgaacttc aagtggagtg aacttcggaa aaagtctctc aacattaggt
1501 cccatttgga agccagttct gaccagtgga agcgtctgca cctttctctg caggaacttc
1561 tggtgtggct acagctgaaa gatgatgaat taagccggca ggcacctatt ggaggcgact
1621 ttccagcagt tcagaagcag aacgatgtac atagggcctt caagagggaa ttgaaaacta
1681 aagaacctgt aatcatgagt actcttgaga ctgtacgaat atttctgaca gagcagcctt
1741 tggaaggact agagaaactc taccaggagc ccagagagct gcctcctgag gagagagccc
1801 agaatgtcac tcggcttcta cgaaagcagg ctgaggaggt caatactgag tgggaaaaat
1861 tgaacctgca ctccgctgac tggcagagaa aaatagatga gacccttgaa agactccggg
1921 aacttcaaga ggccacggat gagctggacc tcaagctgcg ccaagctgag gtgatcaagg
1981 gatcctggca gcccgtgggc gatctcctca ttgactctct ccaagatcac ctcgagaaag
2041 tcaaggcact tcgaggagaa attgcgcctc tgaaagagaa cgtgagccac gtcaatgacc
2101 ttgctcgcca gcttaccact ttgggcattc agctctcacc gtataacctc agcactctgg
2161 aagacctgaa caccagatgg aagcttctgc aggtggccgt cgaggaccga gtcaggcagc
2221 tgcatgaagc ccacagggac tttggtccag catctcagca ctttctttcc acgtctgtcc
2281 agggtccctg ggagagagcc atctcgccaa acaaagtgcc ctactatatc aaccacgaga
2341 ctcaaacaac ttgctgggac catcccaaaa tgacagagct ctaccagtct ttagctgacc
2401 tgaataatgt cagattctca gcttatagga ctgccatgaa actccgaaga ctgcagaagg
2461 ccctttgctt ggatctcttg agcctgtcag ctgcatgtga tgccttggac cagcacaacc
2521 tcaagcaaaa tgaccagccc atggatatcc tgcagattat taattgtttg accactattt
2581 atgaccgcct ggagcaagag cacaacaatt tggtcaacgt ccctctctgc gtggatatgt
2641 gtctgaactg gctgctgaat gtttatgata cgggacgaac agggaggatc cgtgtcctgt
2701 cttttaaaac tggcatcatt tccctgtgta aagcacattt ggaagacaag tacagatacc
2761 ttttcaagca agtggcaagt tcaacaggat tttgtgacca gcgcaggctg ggcctccttc
2821 tgcatgattc tatccaaatt ccaagacagt tgggtgaagt tgcatccttt gggggcagta
2881 acattgagcc aagtgtccgg agctgcttcc aatttgctaa taataagcca gagatcgaag
2941 cggccctctt cctagactgg atgagactgg aaccccagtc catggtgtgg ctgcccgtcc
3001 tgcacagagt ggctgctgca gaaactgcca agcatcaggc caaatgtaac atctgcaaag
3061 agtgtccaat cattggattc aggtacagga gtctaaagca ctttaattat gacatctgcc
3121 aaagctgctt tttttctggt cgagttgcaa aaggccataa aatgcactat cccatggtgg
3181 aatattgcac tccgactaca tcaggagaag atgttcgaga ctttgccaag gtactaaaaa
3241 acaaatttcg aaccaaaagg tattttgcga agcatccccg aatgggctac ctgccagtgc
3301 agactgtctt agagggggac aacatggaaa cgcctgcctc gtcccctcag ctttcacacg
3361 atgatactca ttcacgcatt gaacattatg ctagcaggct agcagaaatg gaaaacagca
3421 atggatctta tctaaatgat agcatctctc ctaatgagag catagatgat gaacatttgt
3481 taatccagca ttactgccaa agtttgaacc aggactcccc cctgagccag cctcgtagtc
3541 ctgcccagat cttgatttcc ttagagagtg aggaaagagg ggagctagag agaatcctag
3601 cagatcttga ggaagaaaac aggaatctgc aagcagaata tgaccgtcta aagcagcagc
3661 acgaacataa aggcctgtcc ccactgccgt cccctcctga aatgatgccc acctctcccc
3721 agagtccccg ggatgctgag ctcattgctg aggccaagct actgcgtcaa cacaaaggcc
3781 gcctggaagc caggatgcaa atcctggaag accacaataa acagctggag tcacagttac
3841 acaggctaag gcagctgctg gagcaacccc aggcagaggc caaagtgaat ggcacaacgg
3901 tgtcctctcc ttctacctct ctacagaggt ccgacagcag tcagcctatg ctgctccgag
3961 tggttggcag tcaaacttcg gactccatgg gtgaggaaga tcttctcagt cctccccagg
4021 acacaagcac agggttagag gaggtgatgg agcaactcaa caactccttc cctagttcaa
4081 gaggacacaa tgtaggaagt cttttccaca tggcagatga tttgggcaga gcgatggagt
4141 ccttagtatc agtcatgaca gatgaagaag gagcagaata aatgttttac aactcctgat
4201 tcccgcatgg tttttataat attcatacaa caaagaggat tagacagtaa gagtttacaa
4261 gaaataaatc tatatttttg tgaagggtag tggtattata ctgtagattt cagtagtttc
4321 taagtctgtt attgttttgt taacaatggc aggttttaca cgtctatgca attgtacaaa
4381 aaagttataa gaaaactaca tgtaaaatct tgatagctaa ataacttgcc atttctttat
4441 atggaacgca ttttgggttg tttaaaaatt tataacagtt ataaagaaag attgtaaact
4501 aaagtgtgct ttataaaaaa aagttgttta taaaaacccc taaaaacaaa acaaacacac
4561 acacacacac atacatacac acacacacac aaaactttga ggcagcgcat tgttttgcat
4621 ccttttggcg tgatatccat atgaaattca tggctttttc tttttttgca tattaaagat
4681 aagacttcct ctaccaccac accaaatgac tactacacac tgctcatttg agaactgtca
4741 gctgagtggg gcaggcttga gttttcattt catatatcta tatgtctata agtatataaa
4801 tactatagtt atatagataa agagatacga atttctatag actgactttt tccatttttt
4861 aaatgttcat gtcacatcct aatagaaaga aattacttct agtcagtcat ccaggcttac
4921 ctgcttggtc tagaatggat ttttcccgga gccggaagcc aggaggaaac tacaccacac
4981 taaaacattg tctacagctc cagatgtttc tcattttaaa caactttcca ctgacaacga
5041 aagtaaagta aagtattgga tttttttaaa gggaacatgt gaatgaatac acaggactta
5101 ttatatcaga gtgagtaatc ggttggttgg ttgattgatt gattgattga ttgatacatt
5161 cagcttcctg ctgctagcaa tgccacgatt tagatttaat gatgcttcag tggaaatcaa
5221 tcagaaggta ttctgacctt gtgaacatca gaaggtattt tttaactccc aagcagtagc
5281 aggacgatga tagggctgga gggctatgga ttcccagccc atccctgtga aggagtaggc
5341 cactctttaa gtgaaggatt ggatgattgt tcataataca taaagttctc tgtaattaca
5401 actaaattat tatgccctct tctcacagtc aaaaggaact gggtggtttg gtttttgttg
5461 cttttttaga tttattgtcc catgtgggat gagtttttaa atgccacaag acataattta
5521 aaataaataa actttgggaa aaggtgtaag acagtagccc catcacattt gtgatactga
5581 caggtatcaa cccagaagcc catgaactgt gtttccatcc tttgcatttc tctgcgagta
5641 gttccacaca ggtttgtaag taagtaagaa agaaggcaaa ttgattcaaa tgttacaaaa
5701 aaacccttct tggtggatta gacaggttaa atatataaac aaacaaacaa aaattgctca
5761 aaaaagagga gaaaagctca agaggaaaag ctaaggactg gtaggaaaaa gctttactct
5821 ttcatgccat tttatttctt tttgattttt aaatcattca ttcaatagat accaccgtgt
5881 gacctataat tttgcaaatc tgttacctct gacatcaagt gtaattagct tttggagagt
5941 gggctgacat caagtgtaat tagcttttgg agagtgggtt ttgtccatta ttaataatta
6001 attaattaac atcaaacacg gcttctcatg ctatttctac ctcactttgg ttttggggtg
6061 ttcctgataa ttgtgcacac ctgagttcac agcttcacca cttgtccatt gcgttatttt
6121 ctttttcctt tataattctt tctttttcct tcataatttt caaaagaaaa cccaaagctc
6181 taaggtaaca aattaccaaa ttacatgaag atttggtttt tgtcttgcat ttttttcctt
6241 tatgtgacgc tggacctttt ctttacccaa ggatttttaa aactcagatt taaaacaagg
6301 ggttacttta catcctacta agaagtttaa gtaagtaagt ttcattctaa aatcagaggt
6361 aaatagagtg cataaataat tttgttttaa tctttttgtt tttcttttag acacattagc
6421 tctggagtga gtctgtcata atatttgaac aaaaattgag agctttattg ctgcatttta
6481 agcataatta atttggacat tatttcgtgt tgtgttcttt ataaccacca agtattaaac
6541 tgtaaatcat aatgtaactg aagcataaac atcacatggc atgttttgtc attgttttca
6601 ggtactgagt tcttacttga gtatcataat atattgtgtt ttaacaccaa cactgtaaca
6661 tttacgaatt atttttttaa acttcagttt tactgcattt tcacaacata tcagacttca
6721 ccaaatatat gccttactat tgtattatag tactgcttta ctgtgtatct caataaagca
6781 cgcagttatg ttacaaaaaa g
//