LOCUS AB208816 2972 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for calpastatin isoform a variant protein.
ACCESSION AB208816
VERSION AB208816.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2972)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..2972
/clone="hh01300a"
/db_xref="H-InvDB:HIT000328751"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003000076"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1..2355
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="calpastatin isoform a variant"
/protein_id="BAD92053.1"
/translation="SGHRRRNAATSNPFFLTNRDQSSAGAGAGHRHVSEKTSESPSKP
GEKKGSDEKKAASLGSSQSSRTYAGGTASATKVSASSGATSKSSSMNPTETKAIPVSQ
QMEGPHLPNKKKHKKQAVKTEPEKKSQSTKLSVVHEKKSQEGKPKEHTEPKSLPKQAS
DTGSNDAHNKKAVSRSAEQQPSEKSTEPKTKPQDMISAGGESVAGITAISGKPGDKKK
EKKSLTPAVPVESKPDKPSGKSGMDAALDDLIDTLGGPEETEEENTTYTGPEVSDPMS
STYIEELGKREVTIPPKYRELLAKPIGPDDAIDALSSDFTCGSPTAAGKKTEKEESTE
VLKAQSAGTVRSAAPPQEKKRKVEKDTMSDQALEALSASLGTRQAEPELDLRSIKEVD
EAKAKEEKLEKCGEDDETIPSEYRLKPATDKDGKPLLPEPEEKPKPRSESELIDELSE
DFDRSECKEKPSKPTEKTEESKAAAPAPVSEAVSRTSMCSIQSAPPEPATLKGTVPDD
AVEALADSLGKKEADPEDGKPVMDKVKEKAKEEDREKLGEKEETIPPDYRLEEVKDKD
GKPLLPKESKEQLPPMSEDFLLDALSEDFSGPQNASSLKFEDAKLAAAISEVVSQTPA
STTQAGAPPRDTSQSDKDLDDALDKLSDSLGQRQPDPDENKPMEDKVKEKAKAEHRDK
LGERDDTIPPEYRHLLDDNGQDKPVKPPTKKSEDSKKPADDQDPIDALSGDLDSCPST
TETSQNTAKDKCKKAASSSKAPKNGGKAKDSAKTTEETSKPKDD"
BASE COUNT 1031 a 633 c 663 g 645 t
ORIGIN
1 tctgggcatc gaaggaggaa cgctgcaacc tccaacccct tctttctgac caaccgggac
61 cagagcagtg ctggggccgg ggcgggtcac cggcatgtca gtgaaaaaac cagtgaatcg
121 ccttccaaac caggagaaaa gaaaggatca gatgagaaaa aagcagcaag cctcggcagc
181 agtcaatcct ccagaaccta tgctggtgga acagcctcgg ccaccaaggt gtcagcttcc
241 tctggtgcaa ccagcaagtc ttccagtatg aatcccacag aaaccaaggc cattccagtc
301 agccaacaga tggaaggacc acatcttcct aacaagaaaa aacacaaaaa acaggctgta
361 aaaacagaac ctgagaagaa gtcacagtca accaagctgt ctgtggttca tgagaaaaaa
421 tcccaagaag gaaagccaaa agaacacaca gagccaaaaa gcctacccaa gcaggcatca
481 gatacaggaa gtaacgatgc tcacaataaa aaagcagttt ccagatcagc tgaacagcag
541 ccatcagaga aatcaacaga accaaagact aaaccacaag acatgatttc tgctggtgga
601 gagagtgttg ctggtatcac tgcaatatct ggcaagccgg gtgacaagaa aaaagaaaag
661 aaatcattaa ccccagctgt gccagttgaa tctaaaccgg ataaaccatc gggaaagtca
721 ggcatggatg ctgctttgga tgacttaata gatactttag gaggacctga agaaactgaa
781 gaagaaaata caacgtatac tggaccagaa gtttcagatc caatgagttc cacctacata
841 gaggaattgg gtaaaagaga agtcacaatt cctccaaaat atagggaact attggctaaa
901 cccatagggc cagatgatgc tatagacgcc ttgtcatctg acttcacctg tgggtcgcct
961 acagctgctg gaaagaaaac tgaaaaagag gaatctacag aagttttaaa agctcagtca
1021 gcagggacag tcagaagtgc tgctccaccc caagagaaga aaagaaaggt ggagaaggat
1081 acaatgagtg atcaagcact cgaggctctg tcggcttcac tgggcacccg gcaagcagaa
1141 cctgagctcg acctccgctc aattaaggaa gtcgatgagg caaaagctaa agaagaaaaa
1201 ctagagaagt gtggtgagga tgatgaaaca atcccatctg agtacagatt aaaaccagcc
1261 acggataaag atggaaaacc actattgcca gagcctgaag aaaaacccaa gcctcggagt
1321 gaatcagaac tcattgatga actttcagaa gattttgacc ggtctgaatg taaagagaaa
1381 ccatctaagc caactgaaaa gacagaagaa tctaaggccg ctgctccagc tcctgtgtcg
1441 gaggctgtgt ctcggacctc catgtgtagt atacagtcag caccccctga gccggctacc
1501 ttgaagggca cagtgccaga tgatgctgta gaagccttgg ctgatagcct ggggaaaaag
1561 gaagcagatc cagaagatgg aaaacctgtg atggataaag tcaaggagaa ggccaaagaa
1621 gaagaccgtg aaaagcttgg tgaaaaagaa gaaacaattc ctcctgatta tagattagaa
1681 gaggtcaagg ataaagatgg aaagccactc ctgccaaaag agtctaagga acagcttcca
1741 cccatgagtg aagacttcct tctggatgct ttgtctgagg acttctctgg tccacaaaat
1801 gcttcatctc ttaaatttga agatgctaaa cttgctgctg ccatctctga agtggtttcc
1861 caaaccccag cttcaacgac ccaagctgga gccccacccc gtgatacctc gcagagtgac
1921 aaagacctcg atgatgcctt ggataaactc tctgacagtc taggacaaag gcagcctgac
1981 ccagatgaga acaaaccaat ggaagataaa gtaaaggaaa aagctaaagc tgaacataga
2041 gacaagcttg gagaaagaga tgacactatc ccacctgaat acagacatct cctggatgat
2101 aatggacagg acaaaccagt gaagccacct acaaagaaat cagaggattc aaagaaacct
2161 gcagatgacc aagaccccat tgatgctctc tcaggagatc tggacagctg tccctccact
2221 acagaaacct cacagaacac agcaaaggat aagtgcaaga aggctgcttc cagctccaaa
2281 gcacctaaga atggaggtaa agcgaaggat tcagcaaaga caacagagga aacttccaag
2341 ccaaaagatg actaaagaaa tacaagttaa ggtatctggt atctgcatgt aaaatcttca
2401 gctggtggat ggtgactttt gaagaacaaa aggctttggc aacagaaaac aattgttctg
2461 ggtgatttct agaatggttt ttgttgagtc tctgaacatc ctaaatattg gtttgttatt
2521 cttttccaga aagaaaatga atttgactgg ttcacctgtg tactgagtat tgataaactt
2581 tgaatttttt taattgcctt caattgggag agaaagcttt atatttgtaa gaaatatatt
2641 tgataaagtt tcttaaagca acaccaaaaa aacaaaagaa aagctaagtg aatttttgca
2701 cattctacac acagtgcctg taaatctcat ttgtattttc agtttgccct taattttttt
2761 tgttagtgtt tagaaaacaa tgttttaaac attcttcagt gttctgattt cttattaccc
2821 cctttcctct tgggcttttg aactgtattt gatgttgctt tgggataatg tttataagtc
2881 aaacataaga tattgtacat tgggcacata tctcctcttg ggctgctaat aataaattaa
2941 taacaggtaa cctggacaaa ccaggaagca cc
//