LOCUS AB115680 1265 bp DNA linear PLN 04-MAR-2005
DEFINITION Rheum palmatum chloroplast matK gene for maturase, partial cds,
isolate:Ps13.
ACCESSION AB115680
VERSION AB115680.1
KEYWORDS .
SOURCE chloroplast Rheum palmatum
ORGANISM Rheum palmatum
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; Caryophyllales; Polygonaceae; Polygonoideae;
Rumiceae; Rheum.
REFERENCE 1 (bases 1 to 1265)
AUTHORS Komatsu,K., Fushimi,H. and Yang,D.
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Katsuko Komatsu
Division of Pharmacognosy, Institute of Natural Medicine, Toyama
Medical and Pharmaceutical University; 2630, Sugitani, Toyama
930-0194, Japan
REFERENCE 2
AUTHORS Yang,D.Y., Fushimi,H., Cai,S.Q. and Komatsu,K.
TITLE Molecular Analysis of Rheum Species Used as Rhei Rhizoma Based on
Chloroplast matK Gene Sequence and Its Application for
Identification
JOURNAL Biol. Pharm. Bull. 27, 375-383 (2004)
COMMENT
FEATURES Location/Qualifiers
source 1..1265
/country="China:Sichuan, Kangding, Tagong"
/db_xref="taxon:137221"
/isolate="Ps13"
/mol_type="genomic DNA"
/organelle="plastid:chloroplast"
/organism="Rheum palmatum"
CDS <1..>1265
/codon_start=1
/gene="matK"
/product="maturase"
/protein_id="BAD90737.1"
/transl_table=11
/translation="LYPLIFQEYIYALVHDQDLGLNRSILLSNKKKSSDTKYSLLVIK
RLVIRMYQQNFFILSVNDSNKTEFLVPKKNLYSQQISEGFATITEIPFSMRLISSLDG
KGLKKYQNLRSIHSIFPFLEDKFLRLNYVLDILIPHPVHLEILVQTIRYWVKDTSCLH
LLRFFLYEYCNSVITLKKSVSDFSKKKNQRFLLFLYNSYVCECESIFVFLRNQSSHLP
STSYGAFLARVYFYLKLEHFVKVFTKHSGVILWFFKDPFLHYVRYQGKWILASRGAFF
MMTKFKYYFVNFWQYNFSLWLQRIYINQSSNRPMEFMGFLLSVRLNPSVVRSQTLENV
FLIDNGIKEFETLVPIMPLIGLLAKAKFCNVLGHPISKPAWADLSDSDIIRRFGRICR
NLSHYYSGSSKKGSLYRIKYILRLSCART"
primer_bind 1..25
primer_bind complement(1242..1265)
BASE COUNT 383 a 212 c 204 g 466 t
ORIGIN
1 ctatatccac ttatctttca ggagtatatt tatgcacttg tacatgatca ggatttaggt
61 ttaaacagat ccattttgtt gtcaaataaa aaaaaaagtt ctgacacaaa atacagttta
121 ctagttataa aacgtttagt tattcgaatg tatcaacaga atttttttat tctttctgtt
181 aatgattcta acaaaaccga atttcttgtg cccaagaaaa atttgtattc tcaacagatc
241 tcagagggat ttgcaactat tacggaaatt ccattttcta tgcgattaat atcttcccta
301 gacggaaaag gactaaaaaa atatcaaaat ttacgatcaa ttcattcaat atttcctttt
361 ttagaggaca aatttttacg tttaaattat gtgttagata tattgatacc tcaccctgtc
421 catctggaaa tcttggttca aactattcgt tactgggtaa aagatacctc ttgtttgcat
481 ttattacgat tctttcttta tgagtattgt aatagtgtta ttactctaaa gaaatctgtt
541 tccgattttt caaaaaaaaa aaatcaaaga ttcttattgt tcctatataa ttcctacgtg
601 tgtgaatgcg aatccatctt cgtttttctc cgcaatcaat cctctcattt accatcaaca
661 tcttacggag cctttcttgc acgagtttat ttctacctaa agttagaaca ttttgtaaaa
721 gtatttacta agcattctgg ggttatcctg tggttcttca aggacccttt tctgcattat
781 gttcgatatc agggaaaatg gattctggct tcaagggggg cattttttat gatgactaaa
841 tttaaatatt actttgtcaa tttctggcaa tataattttt ccctgtggtt gcaaagaatc
901 tatatcaatc aatcatcaaa tcggcccatg gagtttatgg gttttctttt aagtgtacga
961 ctaaacccgt ccgtggtacg gagtcaaacg ttagaaaatg tattcttaat agataatggt
1021 attaaggagt ttgagaccct agttccaatt atgcctctaa ttggattatt ggctaaagcg
1081 aaattttgta acgtattagg acatcccatt agtaagccag cctgggctga tttatccgat
1141 tctgatatta ttcgccgatt tgggcgtata tgtagaaatc tttctcatta ttacagcgga
1201 tcttcaaaaa aggggagttt gtatcggata aagtatatac ttcgactttc ttgtgctaga
1261 acttt
//