LOCUS AB110793 1888 bp mRNA linear HUM 18-MAY-2004
DEFINITION Homo sapiens SNCAIP mRNA for synphilin-1f protein, transcript
variant f, complete cds.
ACCESSION AB110793
VERSION AB110793.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1888)
AUTHORS Shimizu,N., Takayanagi,A., Lim,M.K. and Ohsawa,Y.
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Nobuyoshi Shimizu
Keio University School of Medicine, Molecular Biology; 35
Shinanomachi, Shinjuku-ku, Tokyo 160-8582, Japan
REFERENCE 2
AUTHORS Lim,M.K., Ohsawa,Y., Kawamura,T., Asakawa,S., Takayanagi,A.,
Minoshima,S. and Shimizu,N.
TITLE Identification and characterization of alternatively spliced form
of human synphilin-1
JOURNAL Unpublished (2003)
COMMENT This splice variant lacks exon 3 (131..1002) found in Synphilin-1a
(AB110788).
FEATURES Location/Qualifiers
source 1..1888
/chromosome="5"
/db_xref="H-InvDB:HIT000242325"
/db_xref="taxon:9606"
/dev_stage="fetus"
/map="5q23.1-q23.3"
/mol_type="mRNA"
/organism="Homo sapiens"
/tissue_type="fetal brain"
CDS 1..267
/codon_start=1
/gene="SNCAIP"
/note="transcript variant f"
/product="synphilin-1f protein"
/protein_id="BAD19022.1"
/translation="MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDTQNEDRSA
TPSCRQSRQNSRRKWKQSITYCGVTGTRRVSTAPHFFDGRRLPQ"
BASE COUNT 573 a 483 c 459 g 373 t
ORIGIN
1 atggaagccc ctgaatacct tgatttggat gaaattgact ttagtgatga catatcttat
61 tcagtcacat cactcaagac gatcccagaa ctgtgccgaa gatgtgatac gcaaaacgaa
121 gacagatcag ccacacctag ctgcagacaa tctagacaaa attcacgacg aaaatggaaa
181 caatctatta catattgcgg cgtcacaggg acacgcagag tgtctacagc acctcacttc
241 tttgatggga gaagactgcc tcaatgagcg caacactgag aagttgactc cagcaggcct
301 ggccattaag aatggtcagt tggagtgcgt acgctggatg gtgagcgaaa cagaagccat
361 tgcagaactg agttgttcta aggattttcc aagccttatt cattacgcag gttgctatgg
421 ccaggaaaag attcttctgt ggcttcttca gtttatgcaa gaacagggca tctcgttgga
481 tgaagtagac caggatggca acagtgccgt tcacgtagcc tcacagcatg gctaccttgg
541 atgcatacag accttggttg aatatggagc aaatgtcacc atgcagaacc acgctgggga
601 aaagccctcc cagagcgccg agcggcaggg gcacaccctg tgctccaggt acctggtggt
661 ggtggagacc tgcatgtcgc tggcctctca agtggtgaag ttaaccaagc agctaaagga
721 acaaacagta gaacgtgtca cgctgcagaa ccaactccaa caatttctag aagcccagaa
781 atcagagggc aagtcactcc cttcttcacc cagttcacca tcctcacctg cctccagaaa
841 gtcccagtgg aaatctccag atgcagatga tgattctgta gccaaaagca agccaggagt
901 ccaagagggg attcaggttc ttggaagcct gtcagcctcc agccgggcta gacccaaagc
961 aaaagatgaa gattctgata aaatcttacg ccagttattg ggaaaggaaa tctcagaaaa
1021 tgtctgcacc caggaaaaac tgtccttgga attccaggat gctcaggctt cctctagaaa
1081 ttctaaaaag atcccactgg agaagaggga actgaagtta gccaggctga gacagctgat
1141 gcagaggtca ctgagtgagt ctgacacaga ctccaacaac tctgaggacc ccaagactac
1201 cccagtgagg aaggctgacc gaccaaggcc gcagcccatt gtagaaagcg tagagagtat
1261 ggacagcgca gaaagcctgc acctgatgat taagaaacac accttggcat cagggggacg
1321 caggtttcct ttcagcatca aggcctccaa atccctggat ggccacagcc catctcccac
1381 ctcagagagc agcgaaccag acttagaatc ccagtatcca ggctcaggga gtattcctcc
1441 aaaccagccc tctggtgacc ctcagcagcc cagccctgac agtactgctg cccagaaagt
1501 tgccacaagt cccaagagtg ccctcaagtc tccatcttcc aagcgtagga catctcagaa
1561 cttaaaactg agagttacct ttgaggagcc tgtggtgcag atggagcagc ctagccttga
1621 actgaatgga gaaaaagaca aagataaggg caggactctc cagcggacct ccacaagtaa
1681 cgaatcgggg gatcaactga aaaggccttt tggagccttt cgatctatca tggagacact
1741 aagtggcaac caaaacaata ataataacta ccaggcagcc aaccagctga aaacctctac
1801 attgcccttg acctcacttg ggaggaagac agatgccaag ggaaaccctg ccagctccgc
1861 tagcaaagga aagaataagg cagtataa
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