LOCUS AB110792 1708 bp mRNA linear HUM 18-MAY-2004
DEFINITION Homo sapiens SNCAIP mRNA for synphilin-1e protein, transcript
variant e, complete cds.
ACCESSION AB110792
VERSION AB110792.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1708)
AUTHORS Shimizu,N., Takayanagi,A., Lim,M.K. and Ohsawa,Y.
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Nobuyoshi Shimizu
Keio University School of Medicine, Molecular Biology; 35
Shinanomachi, Shinjuku-ku, Tokyo 160-8582, Japan
REFERENCE 2
AUTHORS Lim,M.K., Ohsawa,Y., Kawamura,T., Asakawa,S., Takayanagi,A.,
Minoshima,S. and Shimizu,N.
TITLE Identification and characterization of alternatively spliced form
of human synphilin-1
JOURNAL Unpublished (2003)
COMMENT This variant lacks exon 3 (131..1002) and exon 4 (1003..1182)
found in Synphilin-1a (AB110788).
FEATURES Location/Qualifiers
source 1..1708
/chromosome="5"
/db_xref="H-InvDB:HIT000242324"
/db_xref="taxon:9606"
/map="5q23.1-q23.3"
/mol_type="mRNA"
/note="identical sequences are seen in multiple
tissue_type."
/organism="Homo sapiens"
/tissue_type="brain, testis"
CDS 1..201
/codon_start=1
/gene="SNCAIP"
/note="transcript variant e"
/product="synphilin-1e protein"
/protein_id="BAD19021.1"
/translation="MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDTQNEDRSE
WSVGVRTLDGERNRSHCRTELF"
BASE COUNT 515 a 437 c 419 g 337 t
ORIGIN
1 atggaagccc ctgaatacct tgatttggat gaaattgact ttagtgatga catatcttat
61 tcagtcacat cactcaagac gatcccagaa ctgtgccgaa gatgtgatac gcaaaacgaa
121 gacagatcag aatggtcagt tggagtgcgt acgctggatg gtgagcgaaa cagaagccat
181 tgcagaactg agttgttcta aggattttcc aagccttatt cattacgcag gttgctatgg
241 ccaggaaaag attcttctgt ggcttcttca gtttatgcaa gaacagggca tctcgttgga
301 tgaagtagac caggatggca acagtgccgt tcacgtagcc tcacagcatg gctaccttgg
361 atgcatacag accttggttg aatatggagc aaatgtcacc atgcagaacc acgctgggga
421 aaagccctcc cagagcgccg agcggcaggg gcacaccctg tgctccaggt acctggtggt
481 ggtggagacc tgcatgtcgc tggcctctca agtggtgaag ttaaccaagc agctaaagga
541 acaaacagta gaacgtgtca cgctgcagaa ccaactccaa caatttctag aagcccagaa
601 atcagagggc aagtcactcc cttcttcacc cagttcacca tcctcacctg cctccagaaa
661 gtcccagtgg aaatctccag atgcagatga tgattctgta gccaaaagca agccaggagt
721 ccaagagggg attcaggttc ttggaagcct gtcagcctcc agccgggcta gacccaaagc
781 aaaagatgaa gattctgata aaatcttacg ccagttattg ggaaaggaaa tctcagaaaa
841 tgtctgcacc caggaaaaac tgtccttgga attccaggat gctcaggctt cctctagaaa
901 ttctaaaaag atcccactgg agaagaggga actgaagtta gccaggctga gacagctgat
961 gcagaggtca ctgagtgagt ctgacacaga ctccaacaac tctgaggacc ccaagactac
1021 cccagtgagg aaggctgacc gaccaaggcc gcagcccatt gtagaaagcg tagagagtat
1081 ggacagcgca gaaagcctgc acctgatgat taagaaacac accttggcat cagggggacg
1141 caggtttcct ttcagcatca aggcctccaa atccctggat ggccacagcc catctcccac
1201 ctcagagagc agcgaaccag acttagaatc ccagtatcca ggctcaggga gtattcctcc
1261 aaaccagccc tctggtgacc ctcagcagcc cagccctgac agtactgctg cccagaaagt
1321 tgccacaagt cccaagagtg ccctcaagtc tccatcttcc aagcgtagga catctcagaa
1381 cttaaaactg agagttacct ttgaggagcc tgtggtgcag atggagcagc ctagccttga
1441 actgaatgga gaaaaagaca aagataaggg caggactctc cagcggacct ccacaagtaa
1501 cgaatcgggg gatcaactga aaaggccttt tggagccttt cgatctatca tggagacact
1561 aagtggcaac caaaacaata ataataacta ccaggcagcc aaccagctga aaacctctac
1621 attgcccttg acctcacttg ggaggaagac agatgccaag ggaaaccctg ccagctccgc
1681 tagcaaagga aagaataagg cagcataa
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