LOCUS AB081589 4261 bp mRNA linear HUM 18-SEP-2002
DEFINITION Homo sapiens L-SOX5 mRNA for L-SOX5 transcript A, complete cds.
ACCESSION AB081589
VERSION AB081589.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4261)
AUTHORS Ikegawa,S., Ikeda,T. and Mabuchi,A.
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Shiro Ikegawa
SNP research center, Riken, Laboratory for bone and joint
diseases; 4-6-1 Sirokanedai, Minato-ku, Tokyo 108-8639, Japan
REFERENCE 2
AUTHORS Ikeda,T., Mabuchi,K., Zhang,J. and Ikegawa,S.
TITLE Identification and characterization of the human long form of Sox5
(L-SOX5) gene
JOURNAL Unpublished (2002)
COMMENT
FEATURES Location/Qualifiers
source 1..4261
/db_xref="H-InvDB:HIT000061384"
/db_xref="taxon:9606"
/mol_type="mRNA"
/organism="Homo sapiens"
CDS 103..2394
/codon_start=1
/gene="L-SOX5"
/note="long from of SOX5"
/product="L-SOX5 transcript A"
/protein_id="BAC16234.1"
/transl_table=1
/translation="MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEES
DGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFA
PHNSSTSPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPE
ETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLA
AHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLP
PLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLG
PLQLQQLYAAQLAAMQVSPGGKLPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVA
QPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAALASPSARVSTIGYL
NDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQL
AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVW
AKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYK
YKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIA
MAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYD
EEEDDPDVDYGSDSENHIAGQAN"
BASE COUNT 1272 a 945 c 941 g 1103 t
ORIGIN
1 gagaaaatca attggtttag aaggtttgga ctcacttgac aggttcagtt ggagacgatc
61 ataggtggct gctgtgacaa agggaaattg tgcttttcca gcatgcttac tgaccctgat
121 ttacctcagg agtttgaaag gatgtcttcc aagcgaccag cctctccgta tggggaagca
181 gatggagagg tagccatggt gacaagcaga cagaaagtgg aagaagagga gagtgacggg
241 ctcccagcct ttcaccttcc cttgcatgtg agttttccca acaagcctca ctctgaggaa
301 tttcagccag tttctctgct gacgcaagag acttgtggcc ataggactcc cacttctcag
361 cacaatacaa tggaagttga tggcaataaa gttatgtctt catttgcccc acacaactca
421 tctacctcac ctcagaaggc agaagaaggt gggcgacaga gtggcgagtc cttgtctagt
481 acagccctgg gaactcctga acggcgcaag ggcagtttag ctgatgttgt tgacaccttg
541 aagcagagga aaatggaaga gctcatcaaa aacgagccgg aagaaacccc cagtattgaa
601 aaactactct caaaggactg gaaagacaag cttcttgcaa tgggatcggg gaactttggc
661 gaaataaaag ggactcccga gagcttagct gagaaagaaa ggcaactcat gggtatgatc
721 aaccagctga ccagcctccg agagcagctg ttggctgccc acgatgagca gaagaaacta
781 gctgcctctc agattgagaa acagcgtcag caaatggagc tggccaagca gcaacaagaa
841 caaattgcaa gacagcagca gcagcttcta cagcaacaac acaaaatcaa tttgctccag
901 caacagatcc aggttcaagg tcagctgccg ccattaatga ttcccgtatt ccctcctgat
961 caacggacac tggctgcagc tgcccagcaa ggattcctcc tccctccagg cttcagctat
1021 aaggctggat gtagtgaccc ttaccctgtt cagctgatcc caactaccat ggcagctgct
1081 gccgcagcaa caccaggctt aggcccactc caactgcagc agttatatgc tgcccagcta
1141 gctgcaatgc aggtatctcc aggagggaag ctgccaggca taccccaagg caaccttggt
1201 gctgctgtat ctcctaccag cattcacaca gacaagagca caaacagccc accacccaaa
1261 agcaaggatg aagtggcaca gccactgaac ctatcagcta aacccaagac ctctgatggc
1321 aaatcaccca catcacccac ctctccccat atgccagctc tgagaataaa cagtggggca
1381 ggccccctca aagcctctgt cccagcagcg ttagctagtc cttcagccag agttagcaca
1441 ataggttact taaatgacca tgatgctgtc accaaggcaa tccaagaagc tcggcaaatg
1501 aaggagcaac tccgacggga acaacaggtg cttgatggga aggtggctgt tgtgaatagt
1561 ctgggtctca ataactgccg aacagaaaag gaaaaaacaa cactggagag tctgactcag
1621 caactggcag ttaaacagaa tgaagaagga aaatttagcc atgcaatgat ggatttcaat
1681 ctgagtggag attctgatgg aagtgctgga gtctcagagt caagaattta tagggaatcc
1741 cgagggcgtg gtagcaatga accccacata aagcgtccaa tgaatgcctt catggtgtgg
1801 gctaaagatg aacggagaaa gatccttcaa gcctttcctg acatgcacaa ctccaacatc
1861 agcaagatat tgggatctcg ctggaaagct atgacaaacc tagagaaaca gccatattat
1921 gaggagcaag cccgtctcag caagcagcac ctggagaagt accctgacta taagtacaag
1981 cccaggccaa agcgcacctg cctggtggat ggcaaaaagc tgcgcattgg tgaatacaag
2041 gcaatcatgc gcaacaggcg gcaggaaatg cggcagtact tcaatgttgg gcaacaagca
2101 cagatcccca ttgccactgc tggtgttgtg taccctggag ccatcgccat ggctgggatg
2161 ccctcccctc acctgccctc ggagcactca agcgtgtcta gcagcccaga gcctgggatg
2221 cctgttatcc agagcactta cggtgtgaaa ggagaggagc cacatatcaa agaagagata
2281 caggccgagg acatcaatgg agaaatttat gatgagtacg acgaggaaga ggatgatcca
2341 gatgtagatt atgggagtga cagtgaaaac catattgcag gacaagccaa ctgataaggg
2401 tcaaaagatt gttgtgacct taggacttaa agaagcccta actggttcat ccttaccagt
2461 ggccaagcac attaactttc tcatacactg actgttactt taactgttag tcttaaatag
2521 ttgggacatc agctgactaa tagacctcag cctcaaaagg cttggaaaga aaaaacaaat
2581 acaacaagca aacaacaata tcaacaacaa gagattgaaa taagctatgg gtaaaataat
2641 gccagtaatt cagctgctac atccaagcac tgaagtctta cccgtcaact tttttttttt
2701 tttaaataaa ctttatggct gtttgttcta caatgttcta gaaattctca ctcaggtaca
2761 cagtgccaac aagtggcttg tgaatgtgtt ttgttgtttt gtgctacaat ttttaaaaag
2821 aaaaaagttt tgttttgttt tttggggttt ctgggttttt tccttttctt tttctttcct
2881 ttcatttttt ttctttgtaa tgcacctgac agaaaaaaaa gaaaaatgaa tttctcttta
2941 cttctctcca ccttctccat ctctctactt taaagatgga agtctgtgca tgaggggaaa
3001 gagggaaaaa gagcctgttt ttaacttcct tgctatccac cacaaaataa gcaattattt
3061 tctttagagg actttatcta ttgcacacca cactacatct ttgagcaagt gccaaatttg
3121 tactgaagtg ttgaccaagt tcattttttc tctttacttt ttccttttcc ttcttaagtt
3181 aggacagtgt taaatcttag acaatccctt gaaaaacctg aaataccagc agctggtgag
3241 atttgacttt tttttttaat ggaaactgta ggtgctgttc tcaggtgaaa agagagagag
3301 agagagagac ataagaaatt tagagaaaaa tattttctga tcttggattt ttgtgtgtat
3361 gtatgtatgt gattatggta ctaataatag gaataacgtt ggaccattgt gagttaaacc
3421 cacatctggg gatgaaatcc cacatcctcc caagtgactg gtctagaaat aatcttgacc
3481 ttgactttgc acttcaaatg acaacttaac caagtatagg gctcagaaat tatattttta
3541 aatgtctgat tattattgga tggatcaggt ggccctgtgt aatagaggtg tgcatgtata
3601 acatggaagc tactagcaaa ctgctcccag atgtcctttc tccctggtca gttggttcca
3661 ttaacgtttg ctacttagtg atttttgttt ttcctgttga tattttgagc aaaacaatca
3721 ttgttttcat tgaatatatt tggccatttt ttcagacaaa tagaattagc ttatttcttc
3781 aacattccat cctttcccga tcaggaaatg aaactgatga ttttataagg tatttttcac
3841 ccctccatga agtgaggtgg aggcctttag catttcagaa gtgtgggcca tatgtagttc
3901 atgccataaa aagtaggatt taattaaaag tcattgcagc ccaataaaat ggagcctggc
3961 tgcacccagg gatccttgcc actgctcttc ccttgctgtc agattaatcc actgaagtcc
4021 aactttggtt caagcagagt atttgcaaag agcaacaact gaatgtgatg ggactgctta
4081 tgtagatttt gccagccaaa tgccaaggca gttgtagggc ctgtacaaat aaatgcaaaa
4141 tcatttcaag tcaattgcca ttatttgtat tgaagtatca gatagatagt aaatactgca
4201 actagtagct tgatgtgcta tagttttcac tccagtcatc attttcctat ctcacccccc
4261 g
//