LOCUS AB081588 4492 bp mRNA linear HUM 18-SEP-2002
DEFINITION Homo sapiens L-SOX5 mRNA for L-SOX5 transcript B, complete cds.
ACCESSION AB081588
VERSION AB081588.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4492)
AUTHORS Ikegawa,S., Ikeda,T. and Mabuchi,A.
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Shiro Ikegawa
SNP research center, Riken, Laboratory for bone and joint
diseases; 4-6-1 Sirokanedai, Minato-ku, Tokyo 108-8639, Japan
REFERENCE 2
AUTHORS Ikeda,T., Mabuchi,K., Zhang,J. and Ikegawa,S.
TITLE Identification and characterization of the human long form of Sox5
(L-SOX5) gene
JOURNAL Unpublished (2002)
COMMENT
FEATURES Location/Qualifiers
source 1..4492
/db_xref="H-InvDB:HIT000061383"
/db_xref="taxon:9606"
/mol_type="mRNA"
/organism="Homo sapiens"
CDS 373..2625
/codon_start=1
/gene="L-SOX5"
/note="long from of SOX5"
/product="L-SOX5 transcript B"
/protein_id="BAC16233.1"
/transl_table=1
/translation="MSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVS
FPNKPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEE
GGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDW
KDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQI
EKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRT
LAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLA
AMQVSPGGKLPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSD
GKSPTSPTSPHMPALRINSGAGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEA
RQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHA
MMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP
DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDG
KKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEH
SSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSD
SENHIAGQAN"
BASE COUNT 1329 a 1019 c 1000 g 1144 t
ORIGIN
1 gtgaaaaagg cgagccacca aaacccatct ccagtctcct cccgggggcc cccagcccgc
61 ctctgtgcca ctttgcatcc cacgccggag ggaggcatta acgagaccgg gtaaggcttt
121 ttaaacggtc caaggtgtag agccatactt caggaggatc cccagaagtt ttggacaagc
181 ctccccaaat gtggcaggtg ctgtgctggc cattggtgac ccaaagatga tgaaaaatat
241 gttcctgccc acaaggagtt agcgacctac tgggctttcc tcttgctgat gacatgattc
301 ctgtttgaat ctgttgacaa gattctgaaa gctgaacaga gaattctggc actgcactgg
361 gtaggaaaaa ggatgtcttc caagcgacca gcctctccgt atggggaagc agatggagag
421 gtagccatgg tgacaagcag acagaaagtg gaagaagagg agagtgacgg gctcccagcc
481 tttcaccttc ccttgcatgt gagttttccc aacaagcctc actctgagga atttcagcca
541 gtttctctgc tgacgcaaga gacttgtggc cataggactc ccacttctca gcacaataca
601 atggaagttg atggcaataa agttatgtct tcatttgccc cacacaactc atctacctca
661 cctcagaagg cagaagaagg tgggcgacag agtggcgagt ccttgtctag tacagccctg
721 ggaactcctg aacggcgcaa gggcagttta gctgatgttg ttgacacctt gaagcagagg
781 aaaatggaag agctcatcaa aaacgagccg gaagaaaccc ccagtattga aaaactactc
841 tcaaaggact ggaaagacaa gcttcttgca atgggatcgg ggaactttgg cgaaataaaa
901 gggactcccg agagcttagc tgagaaagaa aggcaactca tgggtatgat caaccagctg
961 accagcctcc gagagcagct gttggctgcc cacgatgagc agaagaaact agctgcctct
1021 cagattgaga aacagcgtca gcaaatggag ctggccaagc agcaacaaga acaaattgca
1081 agacagcagc agcagcttct acagcaacaa cacaaaatca atttgctcca gcaacagatc
1141 caggttcaag gtcagctgcc gccattaatg attcccgtat tccctcctga tcaacggaca
1201 ctggctgcag ctgcccagca aggattcctc ctccctccag gcttcagcta taaggctgga
1261 tgtagtgacc cttaccctgt tcagctgatc ccaactacca tggcagctgc tgccgcagca
1321 acaccaggct taggcccact ccaactgcag cagttatatg ctgcccagct agctgcaatg
1381 caggtatctc caggagggaa gctgccaggc ataccccaag gcaaccttgg tgctgctgta
1441 tctcctacca gcattcacac agacaagagc acaaacagcc caccacccaa aagcaaggat
1501 gaagtggcac agccactgaa cctatcagct aaacccaaga cctctgatgg caaatcaccc
1561 acatcaccca cctctcccca tatgccagct ctgagaataa acagtggggc aggccccctc
1621 aaagcctctg tcccagcagc gttagctagt ccttcagcca gagttagcac aataggttac
1681 ttaaatgacc atgatgctgt caccaaggca atccaagaag ctcggcaaat gaaggagcaa
1741 ctccgacggg aacaacaggt gcttgatggg aaggtggctg ttgtgaatag tctgggtctc
1801 aataactgcc gaacagaaaa ggaaaaaaca acactggaga gtctgactca gcaactggca
1861 gttaaacaga atgaagaagg aaaatttagc catgcaatga tggatttcaa tctgagtgga
1921 gattctgatg gaagtgctgg agtctcagag tcaagaattt atagggaatc ccgagggcgt
1981 ggtagcaatg aaccccacat aaagcgtcca atgaatgcct tcatggtgtg ggctaaagat
2041 gaacggagaa agatccttca agcctttcct gacatgcaca actccaacat cagcaagata
2101 ttgggatctc gctggaaagc tatgacaaac ctagagaaac agccatatta tgaggagcaa
2161 gcccgtctca gcaagcagca cctggagaag taccctgact ataagtacaa gcccaggcca
2221 aagcgcacct gcctggtgga tggcaaaaag ctgcgcattg gtgaatacaa ggcaatcatg
2281 cgcaacaggc ggcaggaaat gcggcagtac ttcaatgttg ggcaacaagc acagatcccc
2341 attgccactg ctggtgttgt gtaccctgga gccatcgcca tggctgggat gccctcccct
2401 cacctgccct cggagcactc aagcgtgtct agcagcccag agcctgggat gcctgttatc
2461 cagagcactt acggtgtgaa aggagaggag ccacatatca aagaagagat acaggccgag
2521 gacatcaatg gagaaattta tgatgagtac gacgaggaag aggatgatcc agatgtagat
2581 tatgggagtg acagtgaaaa ccatattgca ggacaagcca actgataagg gtcaaaagat
2641 tgttgtgacc ttaggactta aagaagccct aactggttca tccttaccag tggccaagca
2701 cattaacttt ctcatacact gactgttact ttaactgtta gtcttaaata gttgggacat
2761 cagctgacta atagacctca gcctcaaaag gcttggaaag aaaaaacaaa tacaacaagc
2821 aaacaacaat atcaacaaca agagattgaa ataagctatg ggtaaaataa tgccagtaat
2881 tcagctgcta catccaagca ctgaagtctt acccgtcaac tttttttttt ttttaaataa
2941 actttatggc tgtttgttct acaatgttct agaaattctc actcaggtac acagtgccaa
3001 caagtggctt gtgaatgtgt tttgttgttt tgtgctacaa tttttaaaaa gaaaaaagtt
3061 ttgttttgtt ttttggggtt tctgggtttt ttccttttct ttttctttcc tttcattttt
3121 tttctttgta atgcacctga cagaaaaaaa agaaaaatga atttctcttt acttctctcc
3181 accttctcca tctctctact ttaaagatgg aagtctgtgc atgaggggaa agagggaaaa
3241 agagcctgtt tttaacttcc ttgctatcca ccacaaaata agcaattatt ttctttagag
3301 gactttatct attgcacacc acactacatc tttgagcaag tgccaaattt gtactgaagt
3361 gttgaccaag ttcatttttt ctctttactt tttccttttc cttcttaagt taggacagtg
3421 ttaaatctta gacaatccct tgaaaaacct gaaataccag cagctggtga gatttgactt
3481 ttttttttaa tggaaactgt aggtgctgtt ctcaggtgaa aagagagaga gagagagaga
3541 cataagaaat ttagagaaaa atattttctg atcttggatt tttgtgtgta tgtatgtatg
3601 tgattatggt actaataata ggaataacgt tggaccattg tgagttaaac ccacatctgg
3661 ggatgaaatc ccacatcctc ccaagtgact ggtctagaaa taatcttgac cttgactttg
3721 cacttcaaat gacaacttaa ccaagtatag ggctcagaaa ttatattttt aaatgtctga
3781 ttattattgg atggatcagg tggccctgtg taatagaggt gtgcatgtat aacatggaag
3841 ctactagcaa actgctccca gatgtccttt ctccctggtc agttggttcc attaacgttt
3901 gctacttagt gatttttgtt tttcctgttg atattttgag caaaacaatc attgttttca
3961 ttgaatatat ttggccattt tttcagacaa atagaattag cttatttctt caacattcca
4021 tcctttcccg atcaggaaat gaaactgatg attttataag gtatttttca cccctccatg
4081 aagtgaggtg gaggccttta gcatttcaga agtgtgggcc atatgtagtt catgccataa
4141 aaagtaggat ttaattaaaa gtcattgcag cccaataaaa tggagcctgg ctgcacccag
4201 ggatccttgc cactgctctt cccttgctgt cagattaatc cactgaagtc caactttggt
4261 tcaagcagag tatttgcaaa gagcaacaac tgaatgtgat gggactgctt atgtagattt
4321 tgccagccaa atgccaaggc agttgtaggg cctgtacaaa taaatgcaaa atcatttcaa
4381 gtcaattgcc attatttgta ttgaagtatc agatagatag taaatactgc aactagtagc
4441 ttgatgtgct atagttttca ctccagtcat cattttccta tctcaccccc cg
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