LOCUS AB065684 4213 bp DNA linear HUM 23-JUL-2002
DEFINITION Homo sapiens gene for seven transmembrane helix receptor, complete
cds, isolate:CBRC7TM_247.
ACCESSION AB065684
VERSION AB065684.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4213)
AUTHORS Suwa,M.
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Makiko Suwa
Computational Biology Research Center (CBRC), National Institute
of Advanced Industrial Science and Technology (AIST); 2-41-6 Aomi
Koto-ku, Tokyo 135-0064, Japan
URL :http://www.cbrc.jp/
REFERENCE 2
AUTHORS Suwa,M., Sato,T., Okouchi,I., Arita,M., Futami,K., Matsumoto,S.,
Tsutsumi,S., Aburatani,H., Asai,K. and Akiyama,Y.
TITLE Genome-wide discovery and analysis of human seven transmembrane
helix receptor genes.
JOURNAL Unpublished (2001)
COMMENT This sequence is a seven transmembrane helix receptor candidate
predicted from the whole human genome sequences using our
automated system that contains programs of gene
finding(GeneDecoder), sequence search, motif-domain assignment and
transmembrane helix prediction.
And the sequence is submitted by the collaborative project between
[Computational Biology Research Center (CBRC), National Institute
of Advanced Industrial Science and Technology (AIST)] and [Genome
Science Division, Research Center for Advanced Science and
Technology (RCAST), University of Tokyo].
FEATURES Location/Qualifiers
source 1..4213
/chromosome="6"
/db_xref="H-InvDB:HIT000383328"
/db_xref="taxon:9606"
/isolate="CBRC7TM_247"
/mol_type="genomic DNA"
/organism="Homo sapiens"
CDS join(201..461,1398..1631,2592..4013)
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/product="seven transmembrane helix receptor"
/protein_id="BAC05907.1"
/translation="MSAGFMCCHCSDTLVIGPVGPEPRPSHLIWSPFIFPGVCDGVCT
DYSQCTQPCPPDTQGNMGFSCRQKTWHKITDTCQTLNALNIFEEDSRLVQPFEDNIKI
SVYTGKSETITDMLLQKCPTDLSCVIRNIQQSPWIPGNIAVIVQLLHNISTAIWTGVD
EAKMQSYSTIANHILNSKSISNWTFIPDRNSSYILLHSVNSFARRLFIDKHPVDISDV
FIHTMGTTISGDNIGKNFTFSMRINDTSNEVTGRVLISRDELRKVPSPSQVISIAFPT
IGAILEASLLENVTVNGLVLSAILPKELKRISLIFEKISKSEERRTQCVGWHSVENRW
DQQACKMIQENSQQAVCKCRPSKLFTSFSILMSPHILESLILTYITYVGLGISICSLI
LCLSIEVLVWSQVTKTEITYLRHVCIVNIAATLLMADVWFIVASFLSGPITHHKGCVA
ATFFVHFFYLSVFFWMLAKALLILYGIMIVFHTLPKSVLVASLFSVGYGCPLAIAAIT
VAATEPGKGYLRPEICWLNWDMTKALLAFVIPALAIVVVNLITVTLVIVKTQRAAIGN
SMFQEVRAIVRISKNIAILTPLLGLTWGFGVATVIDDRSLAFHIIFSLLNAFQVSPDA
SDQVQSERIHEDVL"
BASE COUNT 1188 a 852 c 938 g 1235 t
ORIGIN
1 tgatccgccc acctcggcct cccaaagtgc tgggattaca ggcatgagcc accgcacctg
61 gccgtgttcc acttttatct attttacaca ctacagttca ggataagatt ttgttggaaa
121 caataaaatt ttgttgctga aatagatgat gaccactgat ccatttcagt cttcctccac
181 tttaggaaaa gaagacactg atgtctgcag gatttatgtg ctgtcactgc agtgacacct
241 tggtgattgg cccagtgggc ccagagccca gaccttccca tctgatatgg tctcctttca
301 ttttcccagg tgtatgcgat ggtgtctgta cagactactc ccagtgtact caaccttgcc
361 ctccagacac tcagggaaat atggggtttt catgcaggca aaagacatgg cacaagatca
421 ctgacacctg ccagactctt aatgccctca acatctttga ggtaatatct tttcttttgc
481 aatatagatt ctaatgtgga ctctatgagc acagtggagc ctcccattgg cagtggatat
541 tgccctcagt aagaaagagg acgaccatgt agcagggcag catgtaggga tgggcgaata
601 gataagcacc cactagcctc actttctatg caaaaatagc cttctaaact ttgggtatct
661 gaaagtctgt gcccatggac acctggccat gtgaaggggc aggctgcagg agggccagaa
721 gggagtcctc taaagcaagg gtcagcaaac ttctggaaag tgacagagag aaatatttca
781 ggctttgtgg gtcacatggt ctctgtcatg cctactcaac tctgccattg tagcatgaaa
841 tcagctgtag acagtattta aatgaatggg cgggctgcat tccagtaaaa ccttatttac
901 aaaaaccagg cagccagcct gggtctgtag tttgccaccc ctgccgtaaa gtgtaggaac
961 cagagtctga atctatggga gatactttct attgctattt tcaatcttgg tgttccagtt
1021 gattcatcca actcgagttt caaatttcta tttttaagac agactcatgg ctcatgattt
1081 gcccttcata aatattacaa ataagcttaa atgccactag aaatttctat atatacaggt
1141 tatctgaaga gatatgctga agataacagt tgttattcgg agagagggga gttaaggaat
1201 aggtagatgg gaaggaggga cttttatttg ctggttcata caacttggta ttggtcaagt
1261 tatttcacag cagatgtgac tctgagagtg taaaatagaa aaacattatg ttaggctgtc
1321 ctaagtttta gtaaaggtac ttttacattt aacacaaaaa taaaatataa aaatttcttt
1381 ctttttctat attgtaggag gattcacgtt tggttcagcc atttgaagac aatataaaaa
1441 taagtgtata tactggaaag tctgagacca taacagatat gttgctacaa aagtgtccca
1501 cagatctgtc ttgtgtaatt agaaacattc agcagtctcc ctggatacca ggaaacattg
1561 ccgtaattgt gcagctctta cacaacatat caacagcaat atggacaggt gttgatgagg
1621 caaagatgca ggtgagtgtc cctgaatagt tggtagagca ttatctcagt gggaaaggaa
1681 tgcaggtttg ttggagtatt ctgtgagctt cttagggact aggaaccatg tctttcacat
1741 cagtatttct aatgtttagc aaagcaagtg ttcagtaaat cttcattaaa gaaaggatga
1801 ataagtgaat ggaaaaagta aacatttaat caacaaatat ttatagagag cacttacttg
1861 gtactgtatt gaactttgga gtatgagtta ccgatgtatc ttttggctac tgaatacatt
1921 taagaaacat tctatgttct ggagagagaa agactcttct tattttcatt tgtgagtcag
1981 gataggttgc taaaatggaa aataattgaa ggcaaagaaa acagccatac ctatccactg
2041 cagaagcatg aaatagaacg gggtccattt tgcttggttt taatcttcaa agcaaagata
2101 gtaaaaagta gattcagact ccagggtgaa tttccaattt attatgttct tgtatagggc
2161 cctgcaacac atttgggatg caacagaggt taatcacgtg ataggttctc tgagcagggt
2221 aagcaagttg ctagtttcga ctaggtgtga tatggagggg atgatggaca tgagcatgtg
2281 gaaagctgcc cagtggcctg gctcgcagga ggccattgca taaatggaga agggcatggt
2341 gaggcaattc ctttgtagct ctatcatcta agtcaaactt cagtgtacat gcaagtcacc
2401 tgagtatctt attaagatgc agattctgat tcattaagtc tggggtgggg cctgagattc
2461 tatattgcta agaagttccc agagtatgcc taggttgctg attggagaag cacgctttat
2521 aaaggtgagt gttgaatgtg ctggcagttt cagagagtgg ctcagtacta acactggttc
2581 ttcattggca gagttacagc accatagcca accacattct taacagcaaa agcatctcca
2641 actggacttt cattcctgac agaaacagca gctatatcct gctacattca gtcaactcct
2701 ttgcaagaag gctattcata gataaacatc ctgttgacat atcagatgtc ttcattcata
2761 ctatgggcac caccatatct ggagataaca ttggaaaaaa tttcactttt tctatgagaa
2821 ttaatgatac cagcaatgaa gtcactggga gagtgttgat cagcagagat gaacttcgga
2881 aggtgccttc cccttctcag gtcatcagca ttgcatttcc aactattggg gctattttgg
2941 aagccagtct tttggaaaat gttactgtaa atgggcttgt cctgtctgcc attttgccca
3001 aggaacttaa aagaatctca ctgatttttg aaaagatcag caagtcagag gagaggagga
3061 cacagtgtgt tggctggcac tctgtggaga acagatggga ccagcaggcc tgcaaaatga
3121 ttcaagaaaa ctcccagcaa gctgtttgca aatgtaggcc aagcaaattg tttacctctt
3181 tctcaattct tatgtcacct cacatcttag agagtctgat tctgacttac atcacatatg
3241 taggcctggg catttctatt tgcagcctga tcctttgctt gtccattgag gtcctagtct
3301 ggagccaagt gacaaagaca gagatcacct atttacgcca tgtgtgcatt gttaacattg
3361 cagccacttt gctgatggca gatgtgtggt tcattgtggc ttcctttctt agtggcccaa
3421 taacacacca caagggatgt gtggcagcca cattttttgt tcatttcttt tacctttctg
3481 tatttttctg gatgcttgcc aaggcactcc ttatcctcta tggaatcatg attgttttcc
3541 ataccttgcc caagtcagtc ctggtggcat ctctgttttc agtgggctat ggatgccctt
3601 tggccattgc tgccatcact gttgctgcca ctgaacctgg caaaggctat ctacgacctg
3661 agatctgctg gctcaactgg gacatgacca aagccctcct ggccttcgtg atcccagctt
3721 tggccatcgt ggtagtaaac ctgatcacag tcacactggt gattgtcaag acccagcgag
3781 ctgccattgg caattccatg ttccaggaag tgagagccat tgtgagaatc agcaagaaca
3841 tcgccatcct cacaccactt ctgggactga cctggggatt tggagtagcc actgtcatcg
3901 atgacagatc cctggccttc cacattatct tctccctgct caatgcattc caggtaagtc
3961 cagatgcttc tgaccaagtg caaagtgaga gaattcatga agatgttctg tgattaggtg
4021 cttgtgacat tagatttcta cataaaagcc aatggatttg gaatagcata tggagtgggg
4081 aaataaactt ttgttccaga gatacctgga tttggatcct gactctttca tttactaata
4141 atgtataaca tgatcttggg atatttactc aacttttttc aagccatatt ttcctcacat
4201 ataaaatgag tgc
//