LOCUS AB054002 2065 bp mRNA linear HUM 14-APR-2001
DEFINITION Homo sapiens NPAS1 mRNA for neuronal PAS domain protein 1,
complete cds.
ACCESSION AB054002
VERSION AB054002.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2065)
AUTHORS Ohe,N.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Norihisa Ohe
Sumitomo Chemical Co.,Ltd, Environmental Health Science
Laboratory; 1-98,3-Chome,Kasugade-naka,Konohana-ku, Osaka, Osaka
530, Japan
REFERENCE 2
AUTHORS Ohe,N., Saito,K. and Kaneko,H.
TITLE The sequence variation of human neuronal PAS domain protein 1
(NPAS1)
JOURNAL Unpublished (2001)
COMMENT
FEATURES Location/Qualifiers
source 1..2065
/clone_lib="pCMVSPORT2 human fetal brain cDNA(GIBCO
BRL,10662-013)"
/db_xref="H-InvDB:HIT000059700"
/db_xref="taxon:9606"
/dev_stage="18-week old fetus"
/mol_type="mRNA"
/organism="Homo sapiens"
/tissue_type="fetal brain"
CDS 162..1934
/codon_start=1
/gene="NPAS1"
/product="neuronal PAS domain protein 1 (NPAS1)"
/protein_id="BAB21098.1"
/transl_table=1
/translation="MAAPYPGSGGGSEVKCVGGRGASVPWDFLPGLMVKAPSGPCLQA
QRKEKSRNAARSRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAA
LGAPPWGLRAAGPPAGLAPGRRGPAALVSEVFEQHLGGHILQSLDGFVFALNQEGKFL
YISETVSIYLGLSQVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSS
SSSSLADTPEIEASLTKVPPSSLVQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRL
RAHALGLVALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELV
GRSCYQFVHGQDATRIRQSHVDLLDKGQVMTGYYRWLQRAGGFVWLQSVATVAGSGKS
PGEHHVLWVSHVLSQAEGGQTPLDAFQLPASVACEEASSPGPEPTEPEPPTEGKQAAP
AENEAPQTQGKRIKVEPGPRETKGSEDSGDEDPSSHPATPRPEFTSVIRAGVLKQDPV
RPWGLAPPGDPPPTLLHAGFLPPVVRGLCTPGTIRYGPAELGLVYPHLQRLGPGPALP
EAFYPPLGLPYPGPAGTRLPRKGD"
misc_difference 400
/note="I80S"
/note="This sequence is different from a previously
reported sequence Acc# NM_002517"
/replace="t"
misc_difference 769
/note="T203P"
/replace="a"
misc_difference 794
/note="S211P"
/replace="t"
misc_difference 1507
/note="V449A"
/replace="t"
BASE COUNT 347 a 746 c 651 g 321 t
ORIGIN
1 tcatccaggc cccccccccc agctccttgc tgggaccctg agccctgcac ggatctcagt
61 ttccctagaa ggtctcccga gggcactaag cgttgcccct ggccccctcc cgctgcagga
121 gactcggggc ctcggagccc gcctgagcga gccccccgga gatggcggcc ccctatcccg
181 gcagtggcgg cggaagcgag gtcaaatgcg tgggaggccg cggcgccagc gtcccctggg
241 actttctacc cgggctgatg gtcaaggcgc cgtccggacc gtgcctgcag gcgcagcgca
301 aggagaagtc ccggaacgcg gcgcgctcgc ggcgcgggaa ggagaacctg gagttcttcg
361 agctggccaa gcttctcccg ctgcccggcg ccatctccag ccagctggac aaggcttcca
421 tcgtgcgcct cagcgtcacc tacctccgcc tgcgccggtt cgccgcgctg ggggcgccgc
481 cctgggggct gagagccgcg gggccgccag ctggcctcgc cccaggccgc cgcggccccg
541 cagcgctggt ctccgaagtc ttcgagcagc acctgggagg tcacatcttg cagtccctgg
601 atggctttgt gttcgccttg aaccaggaag gaaaattcct ctacatctca gagacagtct
661 ccatctatct gggtctctca caggtggaga tgacgggcag cagcgtcttc gactacattc
721 accctgggga ccactcagag gtgctggagc aactggggct gcggacgccg acgcccggcc
781 ccccaacccc gccctccgtc tcctcttcct cctcctcttc ctcttcgctt gcagataccc
841 ccgagatcga ggccagcctc accaaggtgc ccccctcctc cctggtccag gagcgctcct
901 tctttgtccg catgaaatcc acgctcacca agagggggct gcacgtcaag gcctcagggt
961 acaaggtcat ccacgtgact gggcgccttc gggcccacgc cctgggcctt gtggccctcg
1021 ggcacacgtt gcccccggcc cccctggctg agctgccact ccatggacac atgatcgtct
1081 tccgtctcag cctgggtctc accatccttg cttgtgagag cagagtcagc gaccacatgg
1141 acctggggcc ctcagagctg gtgggccgca gctgctacca gtttgtccac ggacaagacg
1201 ccacgaggat ccgccagagc cacgtggact tgctggacaa gggtcaggtg atgactggtt
1261 actaccgttg gctgcagcgt gccgggggct tcgtgtggct gcagtctgtg gccacagtgg
1321 ctgggagcgg gaagagcccc ggggagcacc atgtgctttg ggtcagccac gtgctcagcc
1381 aagccgaggg tggccaaact cctttggatg ccttccagct tccagccagc gtggcctgtg
1441 aggaggcatc cagcccgggg ccagagccca cagagccgga gcctccgacg gaagggaagc
1501 aggctgcccc agcggagaac gaggcccccc agacccaggg caaacgcatc aaagtggagc
1561 ccggcccgag ggaaaccaaa ggctccgagg acagtggcga cgaggatccc tccagccacc
1621 cggccacacc gaggcccgag ttcacctctg tcatccgggc aggggtcctg aagcaggatc
1681 cggtgcggcc atggggcctg gcacctcccg gggacccccc gcccaccctc ctgcacgcgg
1741 gcttcctgcc gccggtggtg cggggcctgt gcacacccgg caccatccgc tacggccccg
1801 cggagctggg cctggtgtac ccgcacctgc agaggctggg tccgggcccc gcgctcccgg
1861 aggcctttta cccgcccctg ggcctgccct acccggggcc cgcgggcacc aggctgccgc
1921 ggaaggggga ctgaggactg gcagagctgc cggcgccgga ccctgcgaca accggggtcc
1981 cccaggacag taggcccggc tctgcccgta gccctgagaa ttaaacgccg gctctccctg
2041 caaaaaaaaa aaaaaaaaaa aaaaa
//