LOCUS AB047744 2702 bp DNA linear PLN 30-JAN-2002
DEFINITION Curcuma kwangsiensis chloroplast trnK, matK genes for tRNA-Lys,
maturase-like polypeptide, partial sequence and complete cds.
ACCESSION AB047744
VERSION AB047744.1
KEYWORDS .
SOURCE chloroplast Curcuma kwangsiensis
ORGANISM Curcuma kwangsiensis
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales;
Zingiberaceae; Curcuma.
REFERENCE 1 (bases 1 to 2702)
AUTHORS Cao,H. and Komatsu,K.
TITLE Direct Submission
JOURNAL Submitted (24-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Katsuko Komatsu
Toyama Medical and Pharmaceutical University, Institute of Natural
Medicine, Research Center for Ethnomedicines; 2630 Sugitani,
Toyama, Toyama 930-0194, Japan
REFERENCE 2
AUTHORS Cao,H., Sasaki,Y., Fushimi,H. and Komatsu,K.
TITLE Molecular Analysis of Medicinally Used Chinese and Japanese
Curcuma Based on 18S rRNA Gene and trnK Gene Sequences
JOURNAL Biol. Pharm. Bull. 24, 1389-1394 (2001)
COMMENT
FEATURES Location/Qualifiers
source 1..2702
/db_xref="taxon:136216"
/mol_type="genomic DNA"
/note="purple-cloud type"
/organelle="plastid:chloroplast"
/organism="Curcuma kwangsiensis"
/specimen_voucher="He 03, Cao 9905 (Museum of Materia
Medica, TMPU)"
tRNA join(2..38,2693..>2702)
/gene="trnK"
/note="5' exon transfer RNA for lysine (UUU)"
/product="tRNA-Lys"
exon 2..38
/gene="trnK"
/note="5' exon"
/product="tRNA-Lys"
misc_feature 501..514
/note="polythymine"
CDS 865..2412
/codon_start=1
/experiment="experimental evidence, no additional details
recorded"
/function="splicing precursor of class II introns"
/gene="matK"
/note="embedden within intron of trnK gene"
/product="maturase-like polypeptide"
/protein_id="BAB82374.1"
/transl_table=11
/translation="MEELQGYLEEDRSRQQQFLYPLLFQEYIYVFAYDHGLNSSIFYE
PQNSLGYDNKFSSVLVKRLIIRMYQKNYLIYSVNDIYQNLFVGHNNYFYFNFFSQILS
EGFAVIVEIPFSLQLISSLEEKEIPKSHNLQSSHSIFPFLEDKLLHLNYLSDILIPYP
VHMEILVQMLQSWIQDVLSLHLLQFLLHEYYNWTSLIIPKKSIYVFSKENKRLFWFLY
NLYIYEYEFLLVFPCKQSSFLRLISSGVLLERIHFYVKIEHLGVCRIFCQKTLWIFKD
PFIHYIRYQGKSILGSRGTHFLMKKWKYHLVNFWQYYFHFWSQPYRIDIKKLSNYSFY
FLGYFSSVQINSSMVRNQMLENSFLMDTLTKKFDTIIPIIPLIRSLSKAQFCTVSGYP
ISKPIWTDLADCDIINRFGRICRKLSHYHSGSSKKQSLYRMKYILRLSCARTLARKHK
SSARSFLQRLSSGLLEEFFTEEEQVIFLIFPKIIYFYLYVSYRERIWYLDIIRINDLV
NCLLVTT"
exon 2693..2702
/gene="trnK"
/note="3' exon"
/product="tRNA-Lys"
BASE COUNT 902 a 391 c 419 g 990 t
ORIGIN
1 tgggttgcta actcaatggt agagtactcg gcttttaagt gcgactatga tcttttacac
61 attttgatga agcaataaat tcgtccagac ttttggtaga gtctataaga ccacgactga
121 tcctcaaagg taatgaatgg aaaaagcagc atgtcgtaat acgtaatata ataaaaaaat
181 agatttatta ttttattttc attgaaaaaa tttcaaatta aaatgaaagt gaaattaaga
241 atttatcctt actcaattct tacaattttt tttggtaggg aagtggacaa aacaaattaa
301 aatttatagt ttggtctagt gaataaatgg atagagcttc atggctccaa ttccaattct
361 gataaaccaa aaagcaacga gcttatgttc ttaatttgaa ttaaatgatt acccgatcta
421 gttagacgtt aaaaatggat tagtacctgg taccctggta cgggaaagga tggggtctcc
481 cgtgaggaga ccattgattc tttttttttt ttttatgaat cctaaatatt gattattatg
541 ggttagagac gaatgtgtaa aagaaacagt atactgataa agataattaa ttccaaaatc
601 aaaagagcaa tcaggttgca aaaataaagg gtcattatcc tcttgtaatt ataacgaaga
661 taaaccattt ttgatagaaa aaggggagta aaaaaaccta ttgattggat tccctctttc
721 ctttacaggt tttttattat tattgtatat atacataatc ttctttatta tacataatac
781 tctgttttga ccatattgca ctatgtatca gttattttat aactcaagaa gttccttcta
841 cctctgcttc acgtggaaat ataaatggaa gaattacaag gatatttaga agaagataga
901 tctcggcaac aacagtttct atatccactt ctctttcaag aatatattta cgtatttgct
961 tatgatcatg ggttaaatag ttcaattttt tatgaacccc aaaactcctt gggttatgac
1021 aataaattta gttcagtact tgtgaaacgt ttaattattc gaatgtatca aaaaaattat
1081 ttgatttatt cggttaatga tatttaccaa aatttatttg ttgggcataa caattatttt
1141 tattttaatt ttttttctca gattctatct gaaggttttg cagtcattgt agaaattcca
1201 ttttcgctgc agttaatatc ttcccttgaa gaaaaagaaa taccaaaatc tcacaattta
1261 caatctagtc attcaatatt tcctttttta gaggataaat tattgcattt aaattatctg
1321 tccgatatac taatacccta tcccgtccat atggaaatct tggtccaaat gcttcaatcc
1381 tggatccagg atgttctctc tttacattta ttgcagttcc ttctccacga atattataat
1441 tggactagtc tcattattcc gaaaaaatct atttacgtat tttcaaaaga aaataaaaga
1501 ctattttggt tcttatataa tttatatata tatgaatacg aatttctatt agtgtttcct
1561 tgtaaacaat cctctttttt acgattaata tcttctggag tccttcttga gcgaatacat
1621 ttttatgtaa aaatagaaca tcttggagtg tgccgaattt tttgtcagaa gactctatgg
1681 attttcaagg atcctttcat acattatatt cgatatcaag gaaaatcgat tctgggttca
1741 agagggactc attttttgat gaagaaatgg aaataccacc ttgttaattt ttggcaatat
1801 tattttcatt tttggtctca accatatagg attgatataa agaaattatc aaactattct
1861 ttttattttc tgggttattt ttcaagtgta caaattaatt cttcgatggt aaggaatcaa
1921 atgctagaga attcatttct gatggatact cttactaaga aatttgatac cataatccca
1981 attattcctc ttattcgatc attgtctaaa gctcaatttt gtaccgtatc tgggtatcct
2041 attagtaaac caatttggac cgatttagcg gattgtgata ttattaatag atttggtcgg
2101 atatgtagaa agctttctca ctatcacagt ggatcctcaa aaaaacagag tttgtatcga
2161 atgaagtata tacttcgact ttcatgtgcc agaactttgg cccgtaaaca taaaagttca
2221 gcacgcagtt ttttgcaaag attaagttcg ggattattag aagaattctt tacggaagaa
2281 gaacaagtta tttttttgat ctttccaaaa ataatttatt tttatttata tgtatcatat
2341 agagaacgta tttggtattt ggatattatc cgtatcaatg acttggtaaa ttgtttatta
2401 gtcacaacat aatacaatat aaatataaga tccatagaag atgtacaaat gatctatatt
2461 tatactatag atcaagagaa aaaatattca gagaattatc attctgaaat gctcatgtag
2521 tactgtactg cttgaatcaa ctgagtagtc aaaattatta tttgcacttt actttcttct
2581 cgggatgttt tttatatgta tacataggga aagtcgtgtg caatgaaaaa tgcaagcacg
2641 ttttggggag ggatttgtta cctattataa caaggaaaaa tatctactcc atccgactag
2701 tt
//