LOCUS AB047743 2701 bp DNA linear PLN 30-JAN-2002
DEFINITION Curcuma zedoaria chloroplast trnK, matK genes for tRNA-Lys,
maturase-like polypeptide, partial sequence and complete cds,
county:Japan.
ACCESSION AB047743
VERSION AB047743.1
KEYWORDS .
SOURCE chloroplast Curcuma zedoaria
ORGANISM Curcuma zedoaria
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales;
Zingiberaceae; Curcuma.
REFERENCE 1 (bases 1 to 2701)
AUTHORS Cao,H. and Komatsu,K.
TITLE Direct Submission
JOURNAL Submitted (24-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Katsuko Komatsu
Toyama Medical and Pharmaceutical University, Institute of Natural
Medicine, Research Center for Ethnomedicines; 2630 Sugitani,
Toyama, Toyama 930-0194, Japan
REFERENCE 2
AUTHORS Cao,H., Sasaki,Y., Fushimi,H. and Komatsu,K.
TITLE Molecular Analysis of Medicinally Used Chinese and Japanese
Curcuma Based on 18S rRNA Gene and trnK Gene Sequences
JOURNAL Biol. Pharm. Bull. 24, 1389-1394 (2001)
COMMENT
FEATURES Location/Qualifiers
source 1..2701
/db_xref="taxon:136224"
/mol_type="genomic DNA"
/note="Japanese population"
/organelle="plastid:chloroplast"
/organism="Curcuma zedoaria"
/specimen_voucher="Komatsu 06, Komatsu 07 (Museum of
Materia Medica, TMPU)"
tRNA join(2..38,2692..>2701)
/gene="trnK"
/note="5' exon transfer RNA for lysine (UUU)"
/product="tRNA-Lys"
exon 2..38
/gene="trnK"
/note="5' exon"
/product="tRNA-Lys"
misc_feature 501..513
/note="polythymine"
CDS 864..2411
/codon_start=1
/experiment="experimental evidence, no additional details
recorded"
/function="splicing precursor of class II intron"
/gene="matK"
/note="embedden within intron of trnK gene"
/product="maturase-like polypeptide"
/protein_id="BAB82373.1"
/transl_table=11
/translation="MEELQGYLEEDRSRQQQFLYPLLFQEYIYVFAYDHGLNSSIFYE
PQNSLGYDNKFSSVLVKRLIIRMYQKNYLIYSVNDIYQNLFVGHNNYFYFNFFSQILS
EGFAVIVEIPFSLQLISSLEEKEIPKSHNLQSSHSIFPFLEDKLLHLNYLSDILIPYP
VHMEILVQMLQSWIQDVLSLHLLQFLLHEYYNWTSLIIPKKSIYVFSKENKRLFWFLY
NLYIYEYEFLLVFPCKQSSFLRLISSGVLLERIHFYVKIEHLGVCRIFCQKTLWIFKD
PFIHYIRYQGKSILGSRGTHFLMKKWKYHLVNFWQYYFHFWSQPYRIDIKKLSNYSFY
FLGYFSSVQINSSMVRNQMLENSFLMDTLTKKFDTIIPIIPLIRSLSKAQFCTVSGYP
ISKPIWTDLADCDIINRFGRICRKLSHYHSGSSKKQSLYRMKYILRLSCARTLARKHK
SSARSFLQRLSSGLLEEFFTEEEQVIFLIFPKIIYFYLYVSYRERIWYLDIIRINDLV
NCLLVTT"
exon 2692..2701
/gene="trnK"
/note="3' exon"
/product="tRNA-Lys"
BASE COUNT 902 a 391 c 419 g 989 t
ORIGIN
1 tgggttgcta actcaatggt agagtactcg gcttttaagt gcgactatga tcttttacac
61 attttgatga agcaataaat tcgtccagac ttttggtaga gtctataaga ccacgactga
121 tcctcaaagg taatgaatgg aaaaagcagc atgtcgtaat acgtaatata ataaaaaaat
181 agatttatta ttttattttc attgaaaaaa tttcaaatta aaatgaaagt gaaattaaga
241 atttatcctt actcaattct tacaattttt tttggtaggg aagtggacaa aacaaattaa
301 aatttatagt ttggtctagt gaataaatgg atagagcttc atggctccaa ttccaattct
361 gataaaccaa aaagcaacga gcttatgttc ttaatttgaa ttaaatgatt acccgatcta
421 gttagacgtt aaaaatggat tagtacctgg taccctggta cgggaaagga tggggtctcc
481 cgtgaggaga ccattgattc tttttttttt tttatgaatc ctaaatattg attattatgg
541 gttagagacg aatgtgtaaa agaaacagta tactgataaa gataattaat tccaaaatca
601 aaagagcaat caggttgcaa aaataaaggg tcattatcct cttgtaatta taacgaagat
661 aaaccatttt tgatagaaaa aggggagtaa aaaaacctat tgattggatt ccctctttcc
721 tttacaggtt ttttattatt attgtatata tacataatct tctttattat acataatact
781 ctgttttgac catattgcac tatgtatcag ttattttata actcaagaag ttccttctac
841 ctctgcttca cgtggaaata taaatggaag aattacaagg atatttagaa gaagatagat
901 ctcggcaaca acagtttcta tatccacttc tctttcaaga atatatttac gtatttgctt
961 atgatcatgg gttaaatagt tcaatttttt atgaacccca aaactccttg ggttatgaca
1021 ataaatttag ttcagtactt gtgaaacgtt taattattcg aatgtatcaa aaaaattatt
1081 tgatttattc ggttaatgat atttaccaaa atttatttgt tgggcataac aattattttt
1141 attttaattt tttttctcag attctatctg aaggttttgc agtcattgta gaaattccat
1201 tttcgctgca gttaatatct tcccttgaag aaaaagaaat accaaaatct cacaatttac
1261 aatctagtca ttcaatattt ccttttttag aggataaatt attgcattta aattatctgt
1321 ccgatatact aataccctat cccgtccata tggaaatctt ggtccaaatg cttcaatcct
1381 ggatccagga tgttctctct ttacatttat tgcagttcct tctccacgaa tattataatt
1441 ggactagtct cattattccg aaaaaatcta tttacgtatt ttcaaaagaa aataaaagac
1501 tattttggtt cttatataat ttatatatat atgaatacga atttctatta gtgtttcctt
1561 gtaaacaatc ctctttttta cgattaatat cttctggagt ccttcttgag cgaatacatt
1621 tttatgtaaa aatagaacat cttggagtgt gccgaatttt ttgtcagaag actctatgga
1681 ttttcaagga tcctttcata cattatattc gatatcaagg aaaatcgatt ctgggttcaa
1741 gagggactca ttttttgatg aagaaatgga aataccacct tgttaatttt tggcaatatt
1801 attttcattt ttggtctcaa ccatatagga ttgatataaa gaaattatca aactattctt
1861 tttattttct gggttatttt tcaagtgtac aaattaattc ttcgatggta aggaatcaaa
1921 tgctagagaa ttcatttctg atggatactc ttactaagaa atttgatacc ataatcccaa
1981 ttattcctct tattcgatca ttgtctaaag ctcaattttg taccgtatct gggtatccta
2041 ttagtaaacc aatttggacc gatttagcgg attgtgatat tattaataga tttggtcgga
2101 tatgtagaaa gctttctcac tatcacagtg gatcctcaaa aaaacagagt ttgtatcgaa
2161 tgaagtatat acttcgactt tcatgtgcca gaactttggc ccgtaaacat aaaagttcag
2221 cacgcagttt tttgcaaaga ttaagttcgg gattattaga agaattcttt acggaagaag
2281 aacaagttat ttttttgatc tttccaaaaa taatttattt ttatttatat gtatcatata
2341 gagaacgtat ttggtatttg gatattatcc gtatcaatga cttggtaaat tgtttattag
2401 tcacaacata atacaatata aatataagat ccatagaaga tgtacaaatg atctatattt
2461 atactataga tcaagagaaa aaatattcag agaattatca ttctgaaatg ctcatgtagt
2521 actgtactgc ttgaatcaac tgagtagtca aaattattat ttgcacttta ctttcttctc
2581 gggatgtttt ttatatgtat acatagggaa agtcgtgtgc aatgaaaaat gcaagcacgt
2641 tttggggagg gatttgttac ctattataac aaggaaaaat atctactcca tccgactagt
2701 t
//