LOCUS AB047735 2704 bp DNA linear PLN 30-JAN-2002
DEFINITION Curcuma phaeocaulis chloroplast trnK, matK genes for tRNA-Lys,
maturase-like polypeptide, partial sequence and complete cds.
ACCESSION AB047735
VERSION AB047735.1
KEYWORDS .
SOURCE Curcuma phaeocaulis
ORGANISM Curcuma phaeocaulis
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales;
Zingiberaceae; Curcuma.
REFERENCE 1 (bases 1 to 2704)
AUTHORS Cao,H. and Komatsu,K.
TITLE Direct Submission
JOURNAL Submitted (24-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Katsuko Komatsu
Toyama Medical and Pharmaceutical University, Institute of Natural
Medicine, Research Center for Ethnomedicines; 2630 Sugitani,
Toyama, Toyama 930-0194, Japan
REFERENCE 2
AUTHORS Cao,H., Sasaki,Y., Fushimi,H. and Komatsu,K.
TITLE Molecular Analysis of Medicinally Used Chinese and Japanese
Curcuma Based on 18S rRNA Gene and trnK Gene Sequences
JOURNAL Biol. Pharm. Bull. 24, 1389-1394 (2001)
COMMENT
FEATURES Location/Qualifiers
source 1..2704
/db_xref="taxon:136218"
/mol_type="genomic DNA"
/organism="Curcuma phaeocaulis"
/specimen_voucher="Xiao 06, He 02, Komatsu Y314, Cao
9804, Cao 9921, Cao 9956 (Museum of Materia Medica, TMPU)"
tRNA join(2..38,2695..>2704)
/gene="trnK"
/note="5' exon"
/product="tRNA-Lys"
exon 2..38
/gene="trnK"
/note="5' exon"
/product="tRNA-Lys"
misc_feature 501..512
/note="polythymine"
CDS 867..2414
/codon_start=1
/experiment="experimental evidence, no additional details
recorded"
/function="splicing precursor of class II intron"
/gene="matK"
/note="embedden within intron of trnK gene"
/product="maturase-like polypeptide"
/protein_id="BAB82368.1"
/transl_table=1
/translation="MEELQGYLEEDRSRQQQFLYPLLFQEYIYVFAYDHGLNSSIFYE
PQNSLGYDNKFSSVLVKRLIIRMYQKNYLIYSVNDIYQNLFVGHNNYFYFNFFSQILS
EGFAVIVEIPFSLQLISSLEEKEIPKSHNLQSSHSIFPFLEDKLLHLNYLSDILIPYP
VHMEILVQMLQSWIQDVLSLHLLQFLLHEYYNWTSLIIPKKSIYVFSKENKRLFWFLY
NLYIYEYEFLLVFPCKQSSFLRLISSGVLLERIHFYVKIEHLGVCRIFCQKTLWIFKD
PFIHYIRYQGKSILGSRGTHFLMKKWKYHLVNFWQYYFHFWSQPYRIDIKKLSNYSFY
FLGYFSSVQINSSMVRNQMLENSFLMDTLTKKFDTIIPIIPLIRSLSKAQFCTVSGYP
ISKPIWTDLADCDIINRFGRICRKLSHYHSGSSKKQSLYRMKYILRLSCARTLARKHK
SSARSFLQRLSSGLLEEFFTEEEQVIFLIFPKIIYFYLYVSYRERIWYLDIIRINDLV
NCLLVTT"
exon 2695..2704
/gene="trnK"
/note="3' exon"
/product="tRNA-Lys"
BASE COUNT 902 a 392 c 419 g 991 t
ORIGIN
1 tgggttgcta actcaatggt agagtactcg gcttttaagt gcgactatga tcttttacac
61 attttgatga agcaataaat tcgtccagac ttttggtaga gtctataaga ccacgactga
121 tcctcaaagg taatgaatgg aaaaagcagc atgtcgtaat acgtaatata ataaaataat
181 agatttatta ttttattttc attgaaaaaa tttcaaatta aaatgaaagt gaaattaaga
241 atttatcctt actcaattct tacaattttt tttggtaggg aagtggacaa aacaaattaa
301 aatttatagt ttggtctagt gaataaatgg atagagcttc atggctccaa ttccaattct
361 gataaaccaa aaagcaacga gcttatgttc ttaatttgaa ttaaatgatt acccgatcta
421 gttagacgtt aaaaatggat tagtacctgg taccctggta cgggaaagga tggggtctcc
481 cgtgaggaga ccattgattc tttttttttt ttatgaatcc taaatattga ttattatggg
541 ttagagacga atgtgtaaaa gaaacagtat actgataaag ataattaatt ccaaaatcaa
601 aagagcaatc aggttgcaaa aataaagggt cattatcctc ttgtaattat aacgaagata
661 aaccattttt gatagaaaaa ggggagtaaa aaaacctatt gattggattc cctctttcct
721 ttacatacag gttttttatt attattgtat atatacataa tcttctttat tatacataat
781 actctgtttt gaccatattg cactatgtat cagttatttt ataactcaag aagttccttc
841 tacctctgct tcacgtggaa atataaatgg aagaattaca aggatattta gaagaagata
901 gatctcggca acaacagttt ctatatccac ttctctttca agaatatatt tacgtatttg
961 cttatgatca tgggttaaat agttcaattt tttatgaacc ccaaaactcc ttgggttatg
1021 acaataaatt tagttcagta cttgtgaaac gtttaattat tcgaatgtat caaaaaaatt
1081 atttgattta ttcggttaat gatatttacc aaaatttatt tgttgggcat aacaattatt
1141 tttattttaa ttttttttct cagattctat ctgaaggttt tgcagtcatt gtagaaattc
1201 cattttcgct gcagttaata tcttcccttg aagaaaaaga aataccaaaa tctcacaatt
1261 tacaatctag tcattcaata tttccttttt tagaggataa attattgcat ttaaattatc
1321 tgtccgatat actaataccc tatcccgtcc atatggaaat cttggtccaa atgcttcaat
1381 cctggatcca ggatgttctc tctttacatt tattgcagtt ccttctccac gaatattata
1441 attggactag tctcattatt ccgaaaaaat ctatttacgt attttcaaaa gaaaataaaa
1501 gactattttg gttcttatat aatttatata tatatgaata cgaatttcta ttagtgtttc
1561 cttgtaaaca atcctctttt ttacgattaa tatcttctgg agtccttctt gagcgaatac
1621 atttttatgt aaaaatagaa catcttggag tgtgccgaat tttttgtcag aagactctat
1681 ggattttcaa ggatcctttc atacattata ttcgatatca aggaaaatcg attctgggtt
1741 caagagggac tcattttttg atgaagaaat ggaaatacca ccttgttaat ttttggcaat
1801 attattttca tttttggtct caaccatata ggattgatat aaagaaatta tcaaactatt
1861 ctttttattt tctgggttat ttttcaagtg tacaaattaa ttcttcgatg gtaaggaatc
1921 aaatgctaga gaattcattt ctgatggata ctcttactaa gaaatttgat accataatcc
1981 caattattcc tcttattcga tcattgtcta aagctcaatt ttgtaccgta tctgggtatc
2041 ctattagtaa accaatttgg accgatttag cggattgtga tattattaat agatttggtc
2101 ggatatgtag aaagctttct cactatcaca gtggatcctc aaaaaaacag agtttgtatc
2161 gaatgaagta tatacttcga ctttcatgtg ccagaacttt ggcccgtaaa cataaaagtt
2221 cagcacgcag ttttttgcaa agattaagtt cgggattatt agaagaattc tttacggaag
2281 aagaacaagt tatttttttg atctttccaa aaataattta tttttattta tatgtatcat
2341 atagagaacg tatttggtat ttggatatta tccgtatcaa tgacttggta aattgtttat
2401 tagtcacaac ataatacaat ataaatataa gatccataga agatgtacaa atgatctata
2461 tttatactat agatcaagag aaaaaatatt cagagaatta tcattctgaa atgctcatgt
2521 agtactgtac tgcttgaatc aactgagtag tcaaaatttt tatttgcact ttactttctt
2581 ctcgggatgt tttttatatg tatacatagg gaaagtcgtg tgcaatgaaa aatgcaagca
2641 cgttttgggg agggatttgt tacctattat aacaaggaaa aatatctact ccatccgact
2701 agtt
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