LOCUS AB040537 3200 bp mRNA linear HUM 28-NOV-2000
DEFINITION Homo sapiens DDX10 mRNA for RNA helicase, complete cds.
ACCESSION AB040537
VERSION AB040537.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3200)
AUTHORS Arai,Y.
TITLE Direct Submission
JOURNAL Submitted (23-MAR-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Yasuhito Arai
National Cancer Center Research Institute, Radiobiology Division;
5-1-1, Tsukiji, Chuo-ku, Tokyo 104-0045, Japan
REFERENCE 2
AUTHORS Arai,Y., Kaneko,Y., Kubo,T., Arai,K., Hosoda,F. and Ohki,M.
TITLE Molecular analysis of the chromosomal breakpoints and
identification of the repetitive sequences near the breakpoints of
NUP98 in therapy-related leukemia with inv(11)(p15q22)
JOURNAL Unpublished (2000)
COMMENT
FEATURES Location/Qualifiers
source 1..3200
/db_xref="H-InvDB:HIT000059286"
/db_xref="taxon:9606"
/mol_type="mRNA"
/organism="Homo sapiens"
exon 1..251
/gene="DDX10"
/number=1
CDS 66..2693
/codon_start=1
/gene="DDX10"
/note="putative"
/product="RNA helicase"
/protein_id="BAB18536.1"
/transl_table=1
/translation="MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQLRKQLKKP
EWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGL
ALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEV
LRKVGKNHDFSAGLIIGGKDLKHEAERINNINILVCTPGRLLQHMDETVSFHATDLQM
LVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWV
HEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFC
RLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDC
PEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDV
QKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAP
RVRFLQKMQKQPTKELVRSQADKVIEPRAPSLTNDEVEEFRAYFNEKMSILQKGGKRL
EGTEHRQDNDTGNEEQEEEEDDEEEMEEKLAKAKGSQAPSLPNTSEAQKIKEVPTQFL
DRDEEEEDADFLKVKRHNVFGLDLKDEKTLQKKEPSKSSIKKKMTKVAEAKKVMKRNF
KVNKKITFTDEGELVQQWPQMQKSAIKDAEEDDDTGGINLHKAKERLQEEDKFDKEEY
RKKIKAKHREKRLKEREARREANKRQAKAKDEEEAFLDWSDDDDDDDDGFDPSTLPDP
DKYRSSEDSDSEDMENKISDTKKKQGMKKRSNSEVEDVGPTSHNRKKARWDTLEPLDT
GLSLAEDEELVLHLLRSQS"
exon 252..312
/gene="DDX10"
/number=2
exon 313..443
/gene="DDX10"
/number=3
exon 444..602
/gene="DDX10"
/number=4
exon 603..723
/gene="DDX10"
/number=5
exon 724..913
/gene="DDX10"
/number=6
exon 914..1040
/gene="DDX10"
/number=7
exon 1041..1203
/gene="DDX10"
/number=8
exon 1204..1288
/gene="DDX10"
/number=9
exon 1289..1387
/gene="DDX10"
/number=10
exon 1388..1475
/gene="DDX10"
/number=11
exon 1476..1564
/gene="DDX10"
/number=12
exon 1565..2030
/gene="DDX10"
/number=13
exon 2031..2150
/gene="DDX10"
/number=14
exon 2151..2312
/gene="DDX10"
/number=15
exon 2313..2369
/gene="DDX10"
/number=16
exon 2370..2515
/gene="DDX10"
/number=17
exon 2516..3177
/gene="DDX10"
/number=18
BASE COUNT 1060 a 609 c 761 g 770 t
ORIGIN
1 ccgtgagtct ggccttaggt gtctcgtgtc tggggttgat ccgagctgtc gccgccgccg
61 ccgcaatggg caaaacggcc aactctccgg gttcgggagc ccgacccgac ccggtgcgga
121 gcttcaatcg ctggaagaaa aaacacagcc ataggcagaa caaaaagaag cagttgagga
181 agcaactgaa gaaacccgaa tggcaggtcg agcgcgagag tatcagccgc ctcatgcaga
241 actatgaaaa gataaatgta aatgaaatca caagattttc agattttccc ttgtccaaaa
301 aaacattgaa aggtttgcaa gaagctcagt accgtttggt gactgagata cagaagcaga
361 ccattggatt ggctttgcaa ggtaaagatg tacttggagc ggccaaaact ggatctggca
421 agactctggc ttttcttgtt ccagtgctgg aagccttata tcgtctgcaa tggacttcaa
481 cagatgggct gggggttctc ataatatcac ctacgagaga actggcctat cagacctttg
541 aggttctccg aaaagtagga aagaatcatg acttctcagc tggtctcatc attggtggaa
601 aggatctaaa acacgaagct gagaggatca acaacataaa tatactcgtg tgcacaccag
661 gtcggcttct tcaacacatg gatgaaacag tatcttttca tgctaccgac ctccaaatgt
721 tagttcttga tgaagcagat agaatcttgg atatgggctt tgctgatacc atgaatgctg
781 ttattgaaaa tctccccaag aaacgtcaga ctttactttt ctcagcaaca caaactaaat
841 ctgtaaagga ccttgcacgc ttgagtttga aaaaccctga gtatgtctgg gttcatgaaa
901 aagcaaaata tagcacccct gccactttgg aacagaacta catagtctgt gagctgcagc
961 aaaaaataag tgtgctgtat tcctttttga gaagccatct gaagaagaag agcattgtat
1021 ttttttccag ttgcaaagag gtccagtatc tgtaccgagt gttttgccgg ctacgtcctg
1081 gtgtttctat ccttgcactc catggtcgac agcagcaaat gagaagaatg gaagtctata
1141 atgagtttgt ccgtaagaga gctgcagtac tctttgctac tgatattgca gccaggggtc
1201 tggatttccc ggccgtgaat tgggttcttc agtttgattg tcctgaggat gccaacacat
1261 atattcacag agcaggtaga actgccaggt acaaagagga tggtgaagct ttgctaattt
1321 tgctaccctc agaaaaagct atggtgcagc agcttcttca gaagaaagta cctgtgaagg
1381 aaatcaaaat caatccagaa aaacttatag atgtccagaa aaaattggaa tctattttag
1441 ctcaagatca agatttaaaa gaaagagctc aaaggtgttt cgtctcctat gtacgatctg
1501 tatatctgat gaaggataaa gaagtatttg atgtgagcaa gttacctata cctgaatatg
1561 ccctgtctct tggtcttgct gtggcaccac gcgtaagatt tcttcagaaa atgcagaaac
1621 aacccaccaa agaattggta aggagccaag ccgataaagt aattgagcca agggctccct
1681 ccctcaccaa tgacgaagtg gaagaattta gagcctactt caatgagaaa atgtccatcc
1741 ttcaaaaagg tggaaaaaga ctcgaaggga cagagcacag acaggataat gatactggta
1801 atgaagaaca ggaagaagaa gaagacgatg aagaagaaat ggaagagaaa ctggcaaaag
1861 caaaaggatc tcaagcccca tctcttccta acaccagtga ggcacagaag atcaaggaag
1921 ttcctacaca gttcttggac agagatgagg aggaagaaga tgctgatttc ttgaaggtga
1981 agcggcataa tgtgtttgga ttggacctta aagacgagaa aacattacag aagaaagaac
2041 cttctaaatc cagcatcaag aaaaaaatga ccaaagttgc agaagcaaaa aaagtaatga
2101 agagaaattt taaagtgaat aagaagataa catttactga tgaaggggag ttggttcagc
2161 agtggccaca aatgcagaaa tctgccatca aggatgctga ggaagatgat gacacaggtg
2221 gtatcaactt acataaagca aaggaaagac ttcaggaaga ggacaaattt gacaaagaag
2281 aatataggaa aaaaattaag gcaaagcatc gggagaaaag actgaaagaa agggaagcca
2341 gaagagaagc caacaagaga caagcaaagg ccaaagatga agaggaagcc tttctggatt
2401 ggagtgatga tgatgatgat gatgatgatg gatttgatcc aagcacactc ccagatccag
2461 ataaatacag aagctctgaa gattcagata gtgaagatat ggaaaataaa ataagtgata
2521 ccaagaagaa gcaggggatg aagaagagga gcaacagtga agtggaagac gtgggaccaa
2581 caagtcataa cagaaagaag gccaggtggg acactttaga gcctttggat accggcctgt
2641 ctttagcaga ggatgaagag ctggtgttac atctgctaag aagtcaaagc taaatacttc
2701 ctgcgcctgc cttctccttg aaaccttggt tatgactgcg taggcaagaa gttgaaaaac
2761 agttgatttg ggggcactta ggtaccatat gccccattcc caaagggcac atttctggat
2821 agaagcgatc gtatctccaa gtccctctca caggacatgc tttgtgccat cactgagcat
2881 actcagatcg agggtggatg ataccatttc ctgaccccgt tttccagcat gtgttctgtt
2941 agatttttat ccatgggttc ctacgccttg tcattggaaa cactgccttt gtcttactgg
3001 caagttctgg agctcttgtg tcattgttag aaatccctgt cttgcttact gtacagaagt
3061 ttctgttgct gttaaaattg ctcatgattt cgacgtattt aatattttca aagagactat
3121 gatggaccag ccctgagaaa gaatgagtat ttttgaattg agatgatcaa taataaacat
3181 atttcctata aaaaaaaaaa
//