LOCUS AB039327 2810 bp mRNA linear HUM 03-MAR-2001
DEFINITION Homo sapiens CASK mRNA for calcium/calmodulin-dependent serine
protein kinase, complete cds.
ACCESSION AB039327
VERSION AB039327.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2810)
AUTHORS Ding,L., Saijo,K., Kawai,K., Akaza,H., Ugai,H., Yokoyama,K.K. and
Ohno,T.
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Liang-Hao Ding
The Institute of Physical And Chemical Research (Riken), Gene
Bank, Cell Bank; Koyadai 3-1-1, Tsukuba, Ibaraki 305-0074, Japan
REFERENCE 2
AUTHORS Ding,L., Saijo,K., Kawai,K., Akaza,H., Ugai,H., Yokoyama,K.K. and
Ohno,T.
TITLE Putative alternative splicing form of human CASK mRNA (partial
codes)
JOURNAL Published Only in Database(2000)
COMMENT
FEATURES Location/Qualifiers
source 1..2810
/cell_type="renal cell carcinoma"
/db_xref="H-InvDB:HIT000059249"
/db_xref="taxon:9606"
/mol_type="mRNA"
/organism="Homo sapiens"
misc_feature 1..359
/note="The 5' end novel sequence was confirmed to be
expressed in RCC and normal kidney tissue by RT-PCR."
CDS 360..1916
/codon_start=1
/gene="CASK"
/note="The protein expressed from the cDNA was bound by
the patient's serum."
/product="calcium/calmodulin-dependent serine protein
kinase"
/protein_id="BAB12252.2"
/transl_table=1
/translation="MYDKINTKSSPQIRNPPSDAVQRAKEVLEEISCYPENNDAKELK
RILTQPHFMALLQTHDVVAHEVYSDEALRVTPPPTSPYLNGDSPESANGGMDMENVTR
VRLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVA
NQTVEQLQKMLREMRGSITFKIVPSYRTQSSSCEDLPSTTQPKGRQIYVRAQFEYDPA
KDDLIPCKEAGIRFRVGDIIQIISKDDHNWWQGKLENSKNGTAGLIPSPELQEWRVAC
IAMEKTKQEQQASCTWFGKKKKQYKDKYLAKHNAVFDQLDLVTYEEVVKLPAFKRKTL
VLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDI
SNNEYLEYGSHEDAMYGTKLETIRKIHEQGLIAILDVEPQALKVLRTAEFAPFVVFIA
APTITPGLNEDESLQRLQKESDILQRTYAHYFDLTIINNEIDETIRHLEEAVELVCTA
PQWVPVSWVY"
BASE COUNT 899 a 523 c 566 g 822 t
ORIGIN
1 gccagaaagc attctttcat tttactctgt attcatgcta ttgaaagttg cttctgtcag
61 aggaaacaaa cactgtgatt gaggaaatat tgatgaattt taaatgacaa ggaaattgcc
121 acattgacag aattttggtc catctattta aagatgattt tttgaaaaga tatgcataag
181 actcatattc tgacaagttt cacagaacaa ttcagaggtt attaccaaga ggatcccact
241 gaaatcatca gcctgccttt ttaaaagaaa aatattgttt agtgaaataa taaatatgaa
301 gctctgattt ttagcaaaga attgtgagtg tttactggat tttcttcttt gctttttagc
361 tgtatgacaa aattaacaca aagtcttcac cacaaatcag gaatcctcca agcgatgcag
421 tacagagagc caaagaggta ttggaagaaa tttcatgtta ccctgagaat aacgacgcaa
481 aggaactaaa gcgtatttta acacaacctc atttcatggc cttacttcag actcacgacg
541 tagtggcaca tgaagtttac agtgatgaag cattgagggt cacacctcct cccacctctc
601 cctatttaaa cggcgattct ccagaaagtg ctaacggagg catggatatg gagaatgtga
661 ccagagttcg gctggtacag tttcaaaaga acacagatga accaatggga atcactttaa
721 aaatgaatga actaaatcat tgtattgttg caagaattat gcatgggggc atgattcaca
781 ggcaaggtac acttcatgtt ggtgatgaaa ttcgagaaat caatggcatc agtgtggcta
841 accaaacagt ggaacaactg caaaaaatgc ttagggaaat gcgggggagt attaccttca
901 agattgtgcc aagttaccgc actcagtctt cgtcctgtga ggacttgcca tcaactaccc
961 aaccaaaagg acgacagatc tatgtaagag cacaatttga atatgatcca gccaaggatg
1021 acctcatccc ctgtaaagaa gctggcattc gattcagagt tggtgacatc atccagatta
1081 ttagtaagga tgatcataat tggtggcagg gtaaactgga aaactccaaa aatggaactg
1141 caggtctcat tccttctcct gaacttcagg aatggcgagt agcttgcatt gccatggaga
1201 agaccaaaca ggagcagcag gccagctgta cttggtttgg caagaaaaag aagcagtaca
1261 aagataaata tttggcaaag cacaatgcag tgtttgatca attagatctt gtcacatatg
1321 aagaagtagt aaaactgcca gcattcaaga ggaaaacact agtcttatta ggcgcacatg
1381 gtgttgggag aagacacata aaaaacactc tcatcacaaa gcacccagac cggtttgcgt
1441 accctattcc acatacaacc agacctccaa agaaagacga agaaaatgga aagaattatt
1501 actttgtatc tcatgaccaa atgatgcaag acatctctaa taacgagtac ttggagtacg
1561 gcagccacga ggatgcgatg tatgggacaa aactggagac catccggaag atccacgagc
1621 aggggctgat tgcaatactg gacgtggagc ctcaggcact gaaggtcctg agaactgcag
1681 agtttgctcc ttttgttgtt ttcattgctg caccaactat tactccaggt ttaaatgagg
1741 atgaatctct tcagcgtctg cagaaggagt ctgacatctt acagagaaca tatgcacact
1801 acttcgatct cacaattatc aacaatgaaa ttgatgagac aatcagacat ctggaggaag
1861 ctgttgagct cgtgtgcaca gccccacagt gggtccctgt ctcctgggtc tattaggcct
1921 ctccccagat atctgagcat aactgggagc acctcatttg tggaaaagcc tctttgttat
1981 cggccttgtg tcagcaggtc atggtcccta gagactacct agttgtagtg tgacctacat
2041 ttataattat tgtcatgtcc gaatagatag gaggagaaaa acaattacac actaatttaa
2101 agagacagta tcttttttaa tcagttctcc taaactttaa taaaatgtat ctttaaatgt
2161 atgtattatt caatcctttg gaatgttata tttttggaaa tcatagcttt ttatttccaa
2221 ggcccctaaa aactgcacaa aatagatgct gctttctata atctatttta ataataataa
2281 acaatgattc tgttaccttg actgggggtg gaacactaca ttctttttag agtctgattt
2341 tatggattgg aatattggga tatctttctt tcctttattt atttgaaata attagtgtag
2401 tgattacaaa acagtcataa atttttaaag gccttttttc tctctttttt ttttttttag
2461 aatagtattt ttttttaagt cctttatgta acatccagat aatgtgatac tgtctctttg
2521 aagcaccctg taaacctttt agagatttga agttgggtct tgactcttaa tgcatgtgga
2581 cagtcgcgag cgtttatgct gtcggtgtgt ctgtgttgga caaaacaatc tgtaatctac
2641 agcaaagtac attctacatt ccgttcatgg ggcacaccca ggggaataag aataaaatgc
2701 tattatgact aagttgtaaa cctatgcaca tcccttgcat tttgggcaac tttataaaaa
2761 aaaagaaact gatttttatt aataataatc atgtagtgaa atgtgtttgt
//