LOCUS AB038950 2168 bp mRNA linear HUM 23-FEB-2001
DEFINITION Homo sapiens ALS2CR2 mRNA for amyotrophic lateral sclerosis 2,
candidate 2, complete cds.
ACCESSION AB038950
VERSION AB038950.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2168)
AUTHORS Hadano,S., Ikeda,J. and Hayden,M.R.
TITLE Direct Submission
JOURNAL Submitted (24-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Shinji Hadano
Tokai University, The Institute of Medical Sciences; Bohseidai,
Isehara, Kanagawa 259-1193, Japan
REFERENCE 2
AUTHORS Hadano,S., Yanagisawa,Y., Skaug,J., Fichter,K., Nasir,J.,
Martindale,D., Koop,B.F., Scherer,S.W., Nicholson,D.W.,
Rouleau,G.A., Ikeda,J.-E. and Hayden,M.R.
TITLE Cloning and characterization of three novel genes, ALS2CR1,
ALS2CR2, and ALS2CR3, in the juvenile amyotrophic lateral
sclerosis (ALS2) critical region at chromosome 2q33-q34: Candidate
genes for ALS2.
JOURNAL Genomics 71, 200-213 (2001)
COMMENT
FEATURES Location/Qualifiers
source 1..2168
/chromosome="2"
/db_xref="H-InvDB:HIT000059246"
/db_xref="taxon:9606"
/map="2q33"
/mol_type="mRNA"
/note="UniGene ID: Hs.5771"
/note="UniGene(Hs.5771) concensus sequence: 2044-2168 nt"
/note="cDNA clone: IMAGE:35296: 1-2043 nt"
/organism="Homo sapiens"
CDS 242..1498
/codon_start=1
/gene="ALS2CR2"
/note="candidate 2"
/note="putative"
/product="amyotrophic lateral sclerosis 2"
/protein_id="BAB32500.1"
/transl_table=1
/translation="MSLLDCFCTSRTQVESLRPEKQSETSIHQYLVDEPTLSWSRPST
RASEVLCSTNVSHYELQVEIGRGFDNLTSVHLARHTPTGTLVTIKITNLENCNEERLK
ALQKAVILSHFFRHPNITTYWTVFTVGSWLWVISPFMAYGSASQLLRTYFPEGMSETL
IRNILFGAVRGLNYLHQNGCIHRSIKASHILISGDGLVTLSGLSHLHSLVKHGQRHRA
VYDFPQFSTSVQPWLSPELLRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQM
LLQKLKGPPYSPLDISIFPQSESRMKNSQSGVDSGIGESVLVSSGTHTVNSDRLHTPS
SKTFSPAFFSLVQLCLQQDPEKRPSASSLLSHVFFKQMKEESQDSILSLLPPAYNKPS
ISLPPVLPWTEPECDFPDEKDSYWEF"
regulatory 2020..2025
/regulatory_class="polyA_signal_sequence"
regulatory 2147..2152
/regulatory_class="polyA_signal_sequence"
BASE COUNT 589 a 494 c 436 g 649 t
ORIGIN
1 tcgcggcctc gccgccctcc cgcgccccgc gccgggagcg ggcctagagc gctcgcctcg
61 cccctccgcg agcagggctc tggcgcccgc ccctgtccgc accgctggca gcctgaagag
121 agtcgctggc cgtggtcgcc gctaggtagg atatatctgc atcttgaaag gaagataaaa
181 caaaagcctt ctttggaata gatggatttt tgtcactttc tgtgtgaact aaagtgattc
241 aatgtctctt ttggattgct tctgcacttc aagaacacaa gttgaatcac tcagacctga
301 aaaacagtct gaaaccagta tccatcaata cttggttgat gagccaaccc tttcctggtc
361 acgtccatcc actagagcca gtgaagtact atgttccacc aacgtttctc actatgagct
421 ccaagtagaa ataggaagag gatttgacaa cttgacttct gtccatcttg cacggcatac
481 tcccacggga acactggtaa ctataaaaat tacaaatctg gaaaactgca atgaagaacg
541 cctgaaagct ttacagaaag ccgtgattct atcccacttt ttccggcatc ccaatattac
601 aacttattgg acagttttca ctgttggcag ctggctttgg gttatttctc catttatggc
661 ctatggttca gcaagtcaac tcttgaggac ctattttcct gaaggaatga gtgaaacttt
721 aataagaaac attctctttg gagccgtgag agggttgaac tatctgcacc aaaatggctg
781 tattcacagg agtattaaag ccagccatat cctcatttct ggtgatggcc tagtgaccct
841 ctctggcctg tcccatctgc atagtttggt taagcatgga cagaggcata gggctgtgta
901 tgatttccca cagttcagca catcagtgca gccgtggctg agtccagaac tactgagaca
961 ggatttacat gggtataatg tgaagtcaga tatttacagt gttgggatta cagcatgtga
1021 attagccagt gggcaggtgc ctttccagga catgcataga actcagatgc tgttacagaa
1081 actgaaaggt cctccttata gcccattgga tatcagtatt ttccctcaat cagaatccag
1141 aatgaaaaat tcccagtcag gtgtagactc tgggattgga gaaagtgtgc ttgtctccag
1201 tggaactcac acagtaaata gtgaccgatt acacacacca tcctcaaaaa ctttctctcc
1261 tgccttcttt agcttggtac agctctgttt gcaacaagat cctgagaaaa ggccatcagc
1321 aagcagttta ttgtcccatg ttttcttcaa acagatgaaa gaagaaagcc aggattcaat
1381 actttcactg ttgcctcctg cttataacaa gccatcaata tcattgcctc cagtgttacc
1441 ttggactgag ccagaatgtg attttcctga tgaaaaagac tcatactggg aattctaggg
1501 ctgccaaatc attttatgtc ctatatactt gacactttct ccttgctgct ttttcttctg
1561 tatttctagg tacaaatacc agaattatac ttgaaataca gtggtgcact ggagaatcta
1621 ttatttaaaa ccactctgtt caaaggggca ccagtttgta gtccctctgt ttcgcacaga
1681 gtactatgac aaggaaacat cagaattact aatctagcta gtgtcattta ttctggaatt
1741 tttttctaag ctgtgactaa ctctttttat ctctcaatat aatttttgag ccagttaatt
1801 tttttcagta ttttgctgtc ccttgggaat gggccctcag aggacagtgc ttccaagtac
1861 atcttctccc agattctctg gcctttttaa tgagctattg ttaaaccaac agggtagttt
1921 atcttacatc agaccctttt ctggtagagg gaaaatgttt gtgctttccc tttttcttct
1981 gttaatactt atggtaacac ctaactgagc ctcactcaca ttaaatgatt cacttgaaat
2041 atatacagaa attgtaattt gctttttttt aaaaaagggg gctaaagtaa cactttccta
2101 cttatgtaaa ttatagatcc taaattcacg caccccgtgg gagctcaata aagatttact
2161 gaattgaa
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