LOCUS AB029790 2570 bp DNA linear PLN 06-JAN-2010
DEFINITION Ophiopogon japonicus var. umbrosus chloroplast trnK gene for
tRNA-Lys, intron, and matK gene for maturase, complete cds.
ACCESSION AB029790
VERSION AB029790.1
KEYWORDS .
SOURCE chloroplast Ophiopogon japonicus var. umbrosus
ORGANISM Ophiopogon japonicus var. umbrosus
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Asparagales;
Asparagaceae; Nolinoideae; Ophiopogon.
REFERENCE 1 (bases 1 to 2570)
AUTHORS Tamura,M.N.
TITLE Direct Submission
JOURNAL Submitted (06-JUL-1999) to the DDBJ/EMBL/GenBank databases.
Contact:Minoru N. Tamura
Department of Botany, Graduate School of Science, Kyoto
University; Kitashirakawa-oiwake-cho, Sakyo-ku, Kyoto 606-8502,
Japan
REFERENCE 2
AUTHORS Yamashita,J. and Tamura,M.N.
TITLE Molecular phylogeny of the Convallariaceae (Asparagales)
JOURNAL (in) Wilson,K.L., Morrison,D.A. (Eds.);
Monocots: Systematics and Evolution: 387-400;
CSIRO, Melbourne (2000)
COMMENT
FEATURES Location/Qualifiers
source 1..2570
/db_xref="taxon:100508"
/mol_type="genomic DNA"
/organelle="plastid:chloroplast"
/organism="Ophiopogon japonicus var. umbrosus"
/variety="umbrosus"
intron 1..2570
/gene="trnK"
/note="tRNA-Lys"
CDS 775..2337
/codon_start=1
/gene="matK"
/product="maturase"
/protein_id="BAA83297.1"
/transl_table=11
/translation="MEELQGYLEKDGSRQQHFLYPLLFQEYIYALAHNHRLNGSIFYE
PVEVFGYDNKSSLVLVKRLITRIYQQNFLISLVNNSNQNRFVGYNHNNFFFSRFHSQM
ISEGFAIIVEIPFSLRLVSYFEEKEIPKYHNLRSIHSIFPFLEDKLSHLNYVSDILIP
HPIHMEILVQILQCWIQDVPFLHLLRFFLHEYHNLNSLLIXXKKSIYVFSKENKRLFR
FLYNSYVFEWEFLLVFIRKQSSYLRLTSSGTFLERTHFYEKIEHLQIEHFVVVCRNYF
HRTLWFCKDPFMHYVRYQGKAILASKGTHLLMKKWKYHFFNFWQYYFHVWTQPYRIHI
NQLSNYSFYFLGYLSSLLLNFSAVRNQMLENSFLIDTITKKFDTIVPVIFLIGALAKA
KFCTVSGHPISKPIWTDLSDSDILDRFGRICRNLSHYHSGSSKKQGLYRIKYILRLSC
ARTLARKHKSTVRTFLRRLGSGLLEEFFTEEEQVLSLIFPKTTPFILHGSHRERIWYL
DIIRINDLVNHS"
BASE COUNT 823 a 393 c 425 g 926 t
ORIGIN
1 gtgcgactat gatcttttac acatttggat gaagcaacca attcgtccag actattggta
61 gagtctataa aaccgcgact gatcctgaaa ggtaatggat ggaaaaaaca gcatgtcgta
121 ataataagaa gaaaatggaa tttcttaatt tcttattaga ttcctctttt tttttagtag
181 aattttgagt cgatccttac cagatcattc caaaattttg tttttatttt aggaggaaga
241 caaaaaaaat tcacatttac agttgggttt agtgaataaa tggattagag ccctacggct
301 ccaattctgg taaaaaaaag caacgagctt ctattcttta tttgaataat tacccgatct
361 aattagacgt taaaaaaaat tagtgcctga tgcgggaaaa ggttctcctg tgagtggtcc
421 tttgattctt tttttttctt ttttaaaaaa tcctaactat tctctattat aggttggaaa
481 cgaatgtgta gaagaaacag tatactgaca aaaagaattt gttccaaagt caaaagagcg
541 atcgggttgc aaaaataaaa gatttttgaa cctctagtaa ttataacgag gataaaccca
601 ttagatagaa ggggggagga aaaagatctg ttgattggac tttctgtttc cgaggtatat
661 atatattttt ttgtacataa tacatatctt gttctgacca tattgcacta tgtataattt
721 gataacccaa gaaatgccta ctgtttttgt ttcaaataga aaaaatgtaa gtcaatggaa
781 gaattacaag gatatttaga aaaggatgga tctcggcaac aacacttcct atatccgcta
841 ctctttcagg aatatattta tgcacttgct cataatcata ggttaaatgg ttcgattttt
901 tacgaacctg tggaagtttt tggttatgac aataaatcta gtttagtact tgtaaaacgt
961 ttaattactc gaatctatca acagaatttt ttgatttctt tggttaataa ttctaatcaa
1021 aatcgattcg ttggatacaa ccacaataat tttttttttt ctcgttttca ttctcaaatg
1081 atatcagaag gttttgcaat tattgtagaa attccattct cgttgcgatt agtatcttat
1141 ttcgaagaaa aagaaatacc aaaatatcat aatttacgat caattcattc aatttttccc
1201 tttttagagg acaaattatc acatttaaat tatgtctcag atatactaat acctcatccc
1261 atacatatgg aaatcttggt tcaaatcctt caatgctgga ttcaagatgt tcctttttta
1321 catttattgc ggttctttct tcacgaatat cataatttga atagtcttct cattannnag
1381 aagaaatcta tttacgtttt ttcaaaagaa aataaaagat tatttcggtt cctatacaat
1441 tcttatgtat ttgaatggga atttttatta gtttttattc gtaaacaatc ttcttattta
1501 cgattaacat cttctggaac ctttcttgag cgaacacatt tctatgaaaa aatagaacat
1561 cttcaaatag aacattttgt agtagtatgt cgtaactatt ttcatagaac cctatggttc
1621 tgcaaagatc ctttcatgca ttatgttcga tatcaaggaa aagcaattct tgcttcaaag
1681 gggactcatc ttctgatgaa gaaatggaaa tatcattttt tcaatttctg gcaatattat
1741 tttcatgttt ggacgcaacc gtacaggatc catataaacc aattatcaaa ctattctttt
1801 tattttctgg gttatctttc aagtctacta ctcaattttt cggcggtaag gaatcaaatg
1861 ttagagaatt catttctaat agataccatt actaagaaat ttgataccat agtcccagtt
1921 atttttctta ttggagcttt ggctaaagct aaattttgta ctgtatcggg ccatcctatt
1981 agtaaaccga tctggaccga tttatcggat tctgatattc ttgatcgatt cggtcggata
2041 tgtagaaatc tttctcatta tcatagtgga tcctcaaaaa aacagggttt gtatcgaata
2101 aagtatatac ttcgactttc gtgtgctaga actttggctc gtaaacataa aagtacagta
2161 cgcacttttt tgcgaagatt gggttcgggg ttattagaag aattctttac ggaagaagaa
2221 caggttcttt ctttgatctt ccccaaaaca actcctttta ttttacatgg gtcacataga
2281 gaacgtattt ggtatttgga tattatccgt attaatgact tagtgaatca ttcatgattg
2341 gtcatgatac cttttaacta gaaaatttct gaatttgcat tctgaaatgc ccgtgtaagt
2401 agtgtagtgg ttgaatccac tgagtagtca aaattcttag actttcttct cggtatgtaa
2461 gttttttata tgtatgtaaa atgtatacat agggaaagtc gtgtgcaatg aaaaatgcaa
2521 gcacggtttg ggaaggggtc ttttcctcta ttgcaacaag aaaaaatgat
//