LOCUS AB025106 2807 bp mRNA linear HUM 07-JAN-2000
DEFINITION Homo sapiens mRNA for E-cadherin, complete cds.
ACCESSION AB025106
VERSION AB025106.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2807)
AUTHORS Shibamoto,S. and Fukudome,Y.
TITLE Direct Submission
JOURNAL Submitted (19-MAR-1999) to the DDBJ/EMBL/GenBank databases.
Contact:Sayumi Shibamoto
Setsunan University, Faculty of Pharmaceutical Sciences,Department
of Biochemistry; 45-1 Nagaotoge-cho, Hirakata, Osaka 573-0101,
Japan
REFERENCE 2
AUTHORS Shibamoto,S. and Fukudome,Y.
TITLE E-cadherin mutant
JOURNAL Published Only in Database(2000)
COMMENT
FEATURES Location/Qualifiers
source 1..2807
/cell_line="HSC-45M2"
/cell_type="signet ring cell carcinoma"
/db_xref="H-InvDB:HIT000058811"
/db_xref="taxon:9606"
/mol_type="mRNA"
/organism="Homo sapiens"
CDS 65..2770
/codon_start=1
/product="E-cadherin"
/protein_id="BAA88957.1"
/translation="MGPWSRSLSALLLLLQVSSWLCQEPEPCHPGFDAESYTFTVPRR
HLERGRVLGRVNFEDCTGRQRTAYFSLDTRFKVGTDGVITVKRPLRFHNPQIHFLVYA
WDSTYRKFSTKVTLNTVGHHHRPPPHQASVSGIQAELLTFPNSSPGLRRQKRDWVIPP
ISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTE
PLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVMEGAL
PGTSVMEVTATDADDDVNTYNAAIAYTILSQDPELPDKNMFTINRNTGVISVVTTGLD
RESFPTYTLVVQAADLQGEGLSTTATAVITVTDTNDNPPIFNPTTYKGQVPENEANVV
ITTLKVTDADAPNTPAWEAVYTILNDDGGQFVVTTNPVNNDGILKTAKDLARCRNWHP
HSCSYPCPLGLDFEAKQQYILHVAVTNVVPFEVSLTTSTATVTVDVLDVNEAPIFVPP
EKRVEVSEDFGVGQEITSYTAQEPDTFMEQKITYRIWRDTANWLEINPDTGAISTRAE
LDREDFEHVKNSTYTALIIATDNGSPVATGTGTLLLILSDVNDNAPIPEPRTIFFCER
NPKPQVINIIDADLPPNTSPFTAELTHGASANWTIQYNDPTQESIILKPKMALEVGDY
KINLKLMDNQNKDQVTTLEVSVCDCEGAAGVCRKAQPVEAGLQIPAILGILGGILALL
ILILLLLLFLRRRAVVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDAR
PEVTRNDVAPTLMSVPRYLPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEG
SGSEAASLSSLNSSESDKDQDYDYLNEWGNRFKKLADMYGGGEDD"
variation 1202
/note="57base insertion between exon 9 and 10 of
E-cadherin"
BASE COUNT 733 a 779 c 697 g 598 t
ORIGIN
1 gctccagccc ggcccgaccc gaccgcaccc ggcgcctgcc ctcgctcggc gtccccggcc
61 agccatgggc ccttggagcc gcagcctctc ggcgctgctg ctgctgctgc aggtctcctc
121 ttggctctgc caggagccgg agccctgcca ccctggcttt gacgccgaga gctacacgtt
181 cacggtgccc cggcgccacc tggagagagg ccgcgtcctg ggcagagtga attttgaaga
241 ttgcaccggt cgacaaagga cagcctattt ttccctcgac acccgattca aagtgggcac
301 agatggtgtg attacagtca aaaggcctct acggtttcat aacccacaga tccatttctt
361 ggtctacgcc tgggactcca cctacagaaa gttttccacc aaagtcacgc tgaatacagt
421 ggggcaccac caccgccccc cgccccatca ggcctccgtt tctggaatcc aagcagaatt
481 gctcacattt cccaactcct ctcctggcct cagaagacag aagagagact gggttattcc
541 tcccatcagc tgcccagaaa atgaaaaagg cccatttcct aaaaacctgg ttcagatcaa
601 atccaacaaa gacaaagaag gcaaggtttt ctacagcatc actggccaag gagctgacac
661 accccctgtt ggtgtcttta ttattgaaag agaaacagga tggctgaagg tgacagagcc
721 tctggataga gaacgcattg ccacatacac tctcttctct cacgctgtgt catccaacgg
781 gaatgcagtt gaggatccaa tggagatttt gatcacggta accgatcaga atgacaacaa
841 gcccgaattc acccaggagg tctttaaggg gtctgtcatg gaaggtgctc ttccaggaac
901 ctctgtgatg gaggtcacag ccacagacgc ggacgatgat gtgaacacct acaatgccgc
961 catcgcttac accatcctca gccaagatcc tgagctccct gacaaaaata tgttcaccat
1021 taacaggaac acaggagtca tcagtgtggt caccactggg ctggaccgag agagtttccc
1081 tacgtatacc ctggtggttc aagctgctga ccttcaaggt gaggggttaa gcacaacagc
1141 aacagctgtg atcacagtca ctgacaccaa cgataatcct ccgatcttca atcccaccac
1201 gtacaagggt caggtgcctg agaacgaggc taacgtcgta atcaccacac tgaaagtgac
1261 tgatgctgat gcccccaata ccccagcgtg ggaggctgta tacaccatat tgaatgatga
1321 tggtggacaa tttgtcgtca ccacaaatcc agtgaacaac gatggcattt tgaaaacagc
1381 aaaggacctg gcaagatgca gaaactggca tcctcacagc tgttcatacc cttgtcccct
1441 gggcttggat tttgaggcca agcagcagta cattctacac gtagcagtga cgaatgtggt
1501 accttttgag gtctctctca ccacctccac agccaccgtc accgtggatg tgctggatgt
1561 gaatgaagcc cccatctttg tgcctcctga aaagagagtg gaagtgtccg aggactttgg
1621 cgtgggccag gaaatcacat cctacactgc ccaggagcca gacacattta tggaacagaa
1681 aataacatat cggatttgga gagacactgc caactggctg gagattaatc cggacactgg
1741 tgccatttcc actcgggctg agctggacag ggaggatttt gagcacgtga agaacagcac
1801 gtacacagcc ctaatcatag ctacagacaa tggttctcca gttgctactg gaacagggac
1861 acttctgctg atcctgtctg atgtgaatga caacgccccc ataccagaac ctcgaactat
1921 attcttctgt gagaggaatc caaagcctca ggtcataaac atcattgatg cagaccttcc
1981 tcccaataca tctcccttca cagcagaact aacacacggg gcgagtgcca actggaccat
2041 tcagtacaac gacccaaccc aagaatctat cattttgaag ccaaagatgg ccttagaggt
2101 gggtgactac aaaatcaatc tcaagctcat ggataaccag aataaagacc aagtgaccac
2161 cttagaggtc agcgtgtgtg actgtgaagg ggccgccggc gtctgtagga aggcacagcc
2221 tgtcgaagca ggattgcaaa ttcctgccat tctggggatt cttggaggaa ttcttgcttt
2281 gctaattctg attctgctgc tcttgctgtt tcttcggagg agagcggtgg tcaaagagcc
2341 cttactgccc ccagaggatg acacccggga caacgtttat tactatgatg aagaaggagg
2401 cggagaagag gaccaggact ttgacttgag ccagctgcac aggggcctgg acgctcggcc
2461 tgaagtgact cgtaacgacg ttgcaccaac cctcatgagt gtcccccggt atcttccccg
2521 ccctgccaat cccgatgaaa ttggaaattt tattgatgaa aatctgaaag cggctgatac
2581 tgaccccaca gccccgcctt atgattctct gctcgtgttt gactatgaag gaagcggttc
2641 cgaagctgct agtctgagct ccctgaactc ctcagagtca gacaaagacc aggactatga
2701 ctacttgaac gaatggggca atcgcttcaa gaagctggct gacatgtacg gaggcggcga
2761 ggacgactag gggactcgag agaggcgggc cccagaccca tgtgctg
//