LOCUS AB025105 2567 bp mRNA linear HUM 07-JAN-2000
DEFINITION Homo sapiens mRNA for E-cadherin, complete cds.
ACCESSION AB025105
VERSION AB025105.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2567)
AUTHORS Shibamoto,S., Fukudome,Y. and Yanagihara,K.
TITLE Direct Submission
JOURNAL Submitted (19-MAR-1999) to the DDBJ/EMBL/GenBank databases.
Contact:Sayumi Shibamoto
Setsunan University, Faculty of Pharmaceutical Sciences,Department
of Biochemistry; 45-1 Nagaotoge-cho, Hirakata, Osaka 573-0101,
Japan
REFERENCE 2
AUTHORS Shibamoto,S., Fukudome,Y. and Yanagihara,K.
TITLE Mutant E-cadherin
JOURNAL Published Only in Database(2000)
COMMENT
FEATURES Location/Qualifiers
source 1..2567
/cell_line="HSC-45M2"
/cell_type="signet ring cell carcinoma"
/db_xref="H-InvDB:HIT000058810"
/db_xref="taxon:9606"
/mol_type="mRNA"
/organism="Homo sapiens"
CDS 65..2530
/codon_start=1
/product="E-cadherin"
/protein_id="BAA88956.1"
/translation="MGPWSRSLSALLLLLQVSSWLCQEPEPCHPGFDAESYTFTVPRR
HLERGRVLGRVNFEDCTGRQRTAYFSLDTRFKVGTDGVITVKRPLRFHNPQIHFLVYA
WDSTYRKFSTKVTLNTVGHHHRPPPHQASVSGIQAELLTFPNSSPGLRRQKRDWVIPP
ISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTE
PLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVMEGAL
PGTSVMEVTATDADDDVNTYNAAIAYTILSQDPELPDKNMFTINRNTGVISVVTTGLD
RESFPTYTLVVQAADLQGEGLSTTATAVITVTDTNDNPPIFNPTTGLDFEAKQQYILH
VAVTNVVPFEVSLTTSTATVTVDVLDVNEAPIFVPPEKRVEVSEDFGVGQEITSYTAQ
EPDTFMEQKITYRIWRDTANWLEINPDTGAISTRAELDREDFEHVKNSTYTALIIATD
NGSPVATGTGTLLLILSDVNDNAPIPEPRTIFFCERNPKPQVINIIDADLPPNTSPFT
AELTHGASANWTIQYNDPTQESIILKPKMALEVGDYKINLKLMDNQNKDQVTTLEVSV
CDCEGAAGVCRKAQPVEAGLQIPAILGILGGILALLILILLLLLFLRRRAVVKEPLLP
PEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDARPEVTRNDVAPTLMSVPRYLPRP
ANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKDQDY
DYLNEWGNRFKKLADMYGGGEDD"
variation 1019
/note="the deleted sequence is corresponding to 1232-1414
of Acc# Z13009 (exon 9 of E-cadherin gene)"
BASE COUNT 662 a 718 c 640 g 547 t
ORIGIN
1 gctccagccc ggcccgaccc gaccgcaccc ggcgcctgcc ctcgctcggc gtccccggcc
61 agccatgggc ccttggagcc gcagcctctc ggcgctgctg ctgctgctgc aggtctcctc
121 ttggctctgc caggagccgg agccctgcca ccctggcttt gacgccgaga gctacacgtt
181 cacggtgccc cggcgccacc tggagagagg ccgcgtcctg ggcagagtga attttgaaga
241 ttgcaccggt cgacaaagga cagcctattt ttccctcgac acccgattca aagtgggcac
301 agatggtgtg attacagtca aaaggcctct acggtttcat aacccacaga tccatttctt
361 ggtctacgcc tgggactcca cctacagaaa gttttccacc aaagtcacgc tgaatacagt
421 ggggcaccac caccgccccc cgccccatca ggcctccgtt tctggaatcc aagcagaatt
481 gctcacattt cccaactcct ctcctggcct cagaagacag aagagagact gggttattcc
541 tcccatcagc tgcccagaaa atgaaaaagg cccatttcct aaaaacctgg ttcagatcaa
601 atccaacaaa gacaaagaag gcaaggtttt ctacagcatc actggccaag gagctgacac
661 accccctgtt ggtgtcttta ttattgaaag agaaacagga tggctgaagg tgacagagcc
721 tctggataga gaacgcattg ccacatacac tctcttctct cacgctgtgt catccaacgg
781 gaatgcagtt gaggatccaa tggagatttt gatcacggta accgatcaga atgacaacaa
841 gcccgaattc acccaggagg tctttaaggg gtctgtcatg gaaggtgctc ttccaggaac
901 ctctgtgatg gaggtcacag ccacagacgc ggacgatgat gtgaacacct acaatgccgc
961 catcgcttac accatcctca gccaagatcc tgagctccct gacaaaaata tgttcaccat
1021 taacaggaac acaggagtca tcagtgtggt caccactggg ctggaccgag agagtttccc
1081 tacgtatacc ctggtggttc aagctgctga ccttcaaggt gaggggttaa gcacaacagc
1141 aacagctgtg atcacagtca ctgacaccaa cgataatcct ccgatcttca atcccaccac
1201 gggcttggat tttgaggcca agcagcagta cattctacac gtagcagtga cgaatgtggt
1261 accttttgag gtctctctca ccacctccac agccaccgtc accgtggatg tgctggatgt
1321 gaatgaagcc cccatctttg tgcctcctga aaagagagtg gaagtgtccg aggactttgg
1381 cgtgggccag gaaatcacat cctacactgc ccaggagcca gacacattta tggaacagaa
1441 aataacatat cggatttgga gagacactgc caactggctg gagattaatc cggacactgg
1501 tgccatttcc actcgggctg agctggacag ggaggatttt gagcacgtga agaacagcac
1561 gtacacagcc ctaatcatag ctacagacaa tggttctcca gttgctactg gaacagggac
1621 acttctgctg atcctgtctg atgtgaatga caacgccccc ataccagaac ctcgaactat
1681 attcttctgt gagaggaatc caaagcctca ggtcataaac atcattgatg cagaccttcc
1741 tcccaataca tctcccttca cagcagaact aacacacggg gcgagtgcca actggaccat
1801 tcagtacaac gacccaaccc aagaatctat cattttgaag ccaaagatgg ccttagaggt
1861 gggtgactac aaaatcaatc tcaagctcat ggataaccag aataaagacc aagtgaccac
1921 cttagaggtc agcgtgtgtg actgtgaagg ggccgccggc gtctgtagga aggcacagcc
1981 tgtcgaagca ggattgcaaa ttcctgccat tctggggatt cttggaggaa ttcttgcttt
2041 gctaattctg attctgctgc tcttgctgtt tcttcggagg agagcggtgg tcaaagagcc
2101 cttactgccc ccagaggatg acacccggga caacgtttat tactatgatg aagaaggagg
2161 cggagaagag gaccaggact ttgacttgag ccagctgcac aggggcctgg acgctcggcc
2221 tgaagtgact cgtaacgacg ttgcaccaac cctcatgagt gtcccccggt atcttccccg
2281 ccctgccaat cccgatgaaa ttggaaattt tattgatgaa aatctgaaag cggctgatac
2341 tgaccccaca gccccgcctt atgattctct gctcgtgttt gactatgaag gaagcggttc
2401 cgaagctgct agtctgagct ccctgaactc ctcagagtca gacaaagacc aggactatga
2461 ctacttgaac gaatggggca atcgcttcaa gaagctggct gacatgtacg gaggcggcga
2521 ggacgactag gggactcgag agaggcgggc cccagaccca tgtgctg
//