LOCUS AB022083 3239 bp mRNA linear HUM 11-JUN-1999
DEFINITION Homo sapiens SOX30 mRNA for SOX30 protein, complete cds.
ACCESSION AB022083
VERSION AB022083.1
KEYWORDS alternative splicing.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3239)
AUTHORS Semba,K.
TITLE Direct Submission
JOURNAL Submitted (05-JAN-1999) to the DDBJ/EMBL/GenBank databases.
Contact:Kentaro Semba
The Institute of Medical Science, Univ. of Tokyo, Dept. of
Cellular and Molecular Biology; 4-6-1, Shirokanedai, Minato-ku,
Tokyo 108-8639, Japan
REFERENCE 2
AUTHORS Osaki,E., Nishina,Y., Inazawa,J., Copeland,N.G., Gilbert,D.J.,
Jenkins,N.A., Ohsugi,M., Tezuka,T., Yoshida,M. and Semba,K.
TITLE Identification of a novel Sry-related gene and its germ
cell-specific expression
JOURNAL Nucleic Acids Res. 27, 2503-2510 (1999)
COMMENT
FEATURES Location/Qualifiers
source 1..3239
/chromosome="5"
/db_xref="H-InvDB:HIT000058720"
/db_xref="taxon:9606"
/map="5q33"
/mol_type="mRNA"
/organism="Homo sapiens"
/sex="male"
/tissue_type="testis"
CDS 296..2557
/codon_start=1
/gene="SOX30"
/note="alternative splicing: see also AB022441"
/product="SOX30 protein"
/protein_id="BAA37146.1"
/transl_table=1
/translation="MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLS
AAASATLASSCGEAVASGLQPAVRRLLQVKPEQVLLLPQPQAQNEEAAASSAQARLLQ
FRPDLRLLQPPTASDGATSRPELHPVQPLALHVKAKKQKLGPSLDQSVGPRGAVETGP
RASRVVKLEGPGPALGYFRGDEKGKLEAEEVMRDSMQGGAGKSPAAIREGVIKTEEPE
RLLEDCRLGAEPASNGLVHGSAEVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQ
GAPPSELIRLTKVPLTPVPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRN
GHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQK
IKEKHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTVYPYRSPTYSVV
IPSLQNPITHPVGETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDPSLPVYPAL
PPQRFTGPSQTDTHQLHSEATHTVKQPTPVSLESANRISSSASTAHARFATSTIQPPR
EYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYF
PSSTCPYSRPPFGYGNFPSSMPECLSYYEDRYPKHEGIFSTLNRDYSFRDYSSECTHS
ENSRSCENMNGTSYYNSHSHSGEENLNPVPQLDIGTLENVFTAPTSTPSSIQQVNVTD
SDEEEEEKVLRDL"
BASE COUNT 846 a 857 c 766 g 770 t
ORIGIN
1 ggatccgcgc gaaaatgtgc aacaagtgcg gcggctccta ccatggcagg tgattcgagg
61 actcagcacg aggcgagagt agggaccagg aagagccgga aaacccgcct gtgattggcc
121 gtccacgggt atcggtcgtt gtgattgggt gaggcccaga cagacagctg cgttttgaac
181 cgcgtagggt tctgggtagc aaaggccttg caaggctctt aaccgaaagg gggaggggga
241 aggtcgccaa caaacggctg agctcacaat cctggccggg gcgtccccct cccccatgga
301 gagagccaga cccgagccgc cgcctcagcc gcgcccgttg cgtcccgctc cgcccccgct
361 gccggtcgag ggcacctcct tttgggcagc agccatggag ccccctccgt cgtctcccac
421 actgagcgcg gcagccagtg cgaccttggc ctcgtcgtgc ggggaggcag tggcgtccgg
481 cttacagccc gcggtgcggc ggctgctgca ggtgaagcca gagcaggtgt tgctgctacc
541 acagcctcag gcccagaacg aggaagccgc tgcctcgtcc gcgcaggcgc ggctgttgca
601 gttcaggccc gacctgcggc tcctgcagcc gccgacagcg tcagacggcg ccacctccag
661 gcccgagttg cacccggtgc agcccctggc gctgcatgtc aaggccaaga agcagaagct
721 ggggcccagc ctggatcagt cagtggggcc tcgaggggcc gtcgaaaccg gtcctagagc
781 ctccagggtg gtcaagttgg aaggccccgg gccggccctc ggctacttcc gaggggacga
841 gaagggcaag ctggaggcgg aggaggtcat gagagactcg atgcaaggcg gggcaggcaa
901 aagcccggca gccatccgag aaggtgtgat caaaacggag gaacccgaga gactcctcga
961 ggactgcagg ctcggcgcgg agcccgcgtc caatggcctg gttcatggca gcgcggaggt
1021 catcttggcc ccaacgtccg gtgcctttgg gccgcaccag caagacctta ggatcccttt
1081 gacgctccac acggtccccc ctggggcccg gatccagttt cagggagctc cgccttcaga
1141 gctgataaga ttgaccaagg tccccctgac accagtgcct actaaaatgc agtccctact
1201 ggagccttct gtaaaaattg aaaccaaaga tgtcccgctc accgtgttgc cctcagatgc
1261 aggcatacca gatactccct tcagtaagga cagaaatggt catgtgaagc gacccatgaa
1321 cgcatttatg gtttgggcaa ggatccaccg accagcacta gccaaagcta acccagcagc
1381 caacaatgca gaaatcagtg tccagcttgg gttagagtgg aacaaactta gtgaagaaca
1441 aaagaaaccc tattacgatg aagcacaaaa gattaaggaa aagcacagag aggaatttcc
1501 tggttgggtt tatcagcctc gtccagggaa gcgaaaacga ttccctctaa gtgtttccaa
1561 tgtattttct ggtaccacac agaatatcat ctctacaaat cctacaacag tttatcctta
1621 ccgctcacct acgtactctg tggtaattcc cagcctacag aatcccatca ctcatccagt
1681 tggtgaaacc tcacctgcta tccagctgcc cacacctgca gtccagagcc caagccctgt
1741 cacacttttc cagcccagcg tctccagtgc tgctcaggtg gctgtccagg atccaagtct
1801 acctgtctat ccagcactcc caccccaacg ctttactggg ccttcccaaa cagacactca
1861 tcagctgcat tctgaagcca ctcacactgt gaagcaaccc actcctgtct ctctagagag
1921 cgccaacagg atttcaagta gtgcaagtac tgcccatgcc agatttgcaa cttcgaccat
1981 ccaacctcct agggagtatt ccagcgtttc cccttgtccc agaagtgctc caatccccca
2041 ggcttctccc attccacacc cacatgtcta ccagccccct ccccttggcc atccagccac
2101 actgttcggg acaccaccaa gattctcttt tcatcaccct tacttcctac ccggacctca
2161 ctacttccca tcaagtacat gcccttacag tcggcctccc tttggctatg gaaattttcc
2221 gagttcaatg ccagaatgcc ttagttatta tgaagacagg tacccaaaac atgagggtat
2281 cttttcaact ttaaatagag actattcttt tagagactac tcaagtgaat gcacacacag
2341 tgaaaattct cggagttgtg agaacatgaa tggaacttct tactataaca gtcatagcca
2401 cagtggggaa gaaaacttaa accctgtgcc tcagctggac attggaacct tggagaatgt
2461 cttcacagcc ccgacatcaa ctccttctag catccagcaa gtcaatgtca ccgacagtga
2521 tgaggaggaa gaagaaaaag tgctcaggga tttataattt taaaacaaat atgcacagaa
2581 aataaacatt tcttaaaata tattctgggt cagttggtat gagaaaaaaa aaagcctaga
2641 attctttgtt gaaagttttc agtcgtgatt tgaggagtta aaaccaaatg caatttatgt
2701 cttcataaaa ttttgattag tgaaactaga gtctggatgt ttcattgtag gaatatttaa
2761 gttattaagt agtttaattt taatggctga aatttgcatc aacatgtatt attattactt
2821 tatcctggaa catgcaaaat actgaagcct cacagttgta tgtgagggga aaggggaaat
2881 aaatctagca tagtgtgatt tttattttat ctcaggatac attttttaaa tgattttttg
2941 tttgcttttt atgtaatact tatggatgtt gtcaattttt gatgtaacat tttgaaagta
3001 ttttgacaac tcctagtgaa cttggacttg gttgctaaat ttaacttaca ctaataacca
3061 attataagtt ccaaatgtgt tttaatggca cctgggtgat tcttcagcta aatttagtca
3121 tttctgtttc taaatatttt tatcatttta aaatattttt tttccatttg gcatacatcg
3181 ttctttgttg taattaaata aacatagata aaattgttaa aaaaaaaaaa aaatctaga
//